Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 3.4e-281 971.1 511 100.0
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 1.1e-255 886.3 511 89.2
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 89.0
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 1.2e-254 882.9 511 88.8
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.3e-253 879.4 511 88.8
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 1.3e-253 879.4 511 88.6
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 1.7e-253 879.0 511 88.5
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.7e-253 879.0 511 88.8
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.0e-253 878.2 511 89.0
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 1.5e-252 875.9 511 88.8
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.5e-252 875.9 511 88.1
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 1.9e-252 875.5 511 88.3
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 3.3e-252 874.8 511 88.1
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 5.6e-252 874.0 511 88.3
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 1.2e-251 872.8 511 88.3
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.6e-251 872.5 511 88.1
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 2.8e-251 871.7 511 88.5
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 3.6e-251 871.3 511 88.1
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 3.6e-251 871.3 511 87.3
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.1e-250 869.8 511 86.9
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.4e-250 869.4 511 87.5
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 6.8e-250 867.1 511 86.7
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 1.2e-249 866.3 511 87.7
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.2e-249 866.3 511 87.3
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.5e-249 865.9 511 86.5
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 2.0e-249 865.5 511 86.1
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 2.0e-249 865.5 511 88.1
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 2.0e-249 865.5 511 87.3
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 2.6e-249 865.1 512 87.1
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 2.6e-249 865.1 512 87.5
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 4.4e-249 864.4 511 86.5
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 5.8e-249 864.0 511 86.9
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 7.6e-249 863.6 512 87.5
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 7.6e-249 863.6 511 86.3
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 9.9e-249 863.2 511 86.3
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 1.3e-248 862.8 511 86.5
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 1.7e-248 862.4 511 86.3
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 2.2e-248 862.1 512 87.3
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 2.2e-248 862.1 511 87.3
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 4.9e-248 860.9 511 87.5
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 6.4e-248 860.5 512 86.5
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 6.4e-248 860.5 511 86.9
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 8.4e-248 860.1 512 87.3
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.9e-247 859.0 513 86.7
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 3.2e-247 858.2 511 87.1
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 1.2e-246 856.3 512 85.9
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 85.7
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 85.7
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 85.7
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.5e-246 854.7 511 85.9
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 6.0e-246 854.0 511 85.7
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.3e-245 852.8 512 86.3
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 1.3e-245 852.8 511 85.9
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 3.9e-245 851.3 511 85.1
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 5.1e-245 850.9 511 85.3
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 6.6e-245 850.5 511 84.1
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.9e-244 849.0 511 84.7
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 1.9e-244 849.0 511 86.1
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 5.6e-244 847.4 511 85.1
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 7.3e-244 847.0 511 84.1
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 7.3e-244 847.0 511 84.0
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 9.6e-244 846.7 511 84.9
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.3e-243 846.3 511 84.7
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.6e-243 845.9 511 83.6
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 84.9
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 2.8e-243 845.1 511 84.7
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 3.6e-243 844.7 511 83.8
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 4.8e-243 844.3 511 85.1
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 6.2e-243 844.0 511 84.5
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 1.4e-242 842.8 511 84.0
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 1.8e-242 842.4 511 84.0
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.8e-242 842.4 511 84.5
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 2.0e-241 839.0 528 83.7
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.0e-241 839.0 511 84.1
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 2.0e-241 839.0 511 83.4
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 2.6e-241 838.6 511 84.5
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 83.6
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 85.1
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 7.6e-241 837.0 511 84.1
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 9.9e-241 836.6 525 83.4
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 9.9e-241 836.6 503 85.5
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.3e-240 836.3 511 84.9
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.3e-240 836.3 511 83.0
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 2.2e-240 835.5 512 84.6
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 4.9e-240 834.3 511 83.8
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 83.4
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 83.6
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 83.4
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 83.4
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 1.9e-239 832.4 511 83.0
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 3.2e-239 831.6 511 83.4
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 9.3e-239 830.1 511 82.8
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.2e-238 829.7 511 84.0
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 1.2e-238 829.7 511 82.8
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 1.2e-238 829.7 550 79.3
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 2.7e-238 828.6 511 82.6
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.5e-238 828.2 511 83.2
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 7.9e-238 827.0 511 84.0
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 3.0e-237 825.1 511 84.1
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 3.9e-237 824.7 511 82.2
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 5.1e-237 824.3 512 83.0
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.5e-236 822.8 511 82.8
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 3.3e-236 821.6 511 82.2
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 3.4e-233 811.6 511 81.2
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 2.9e-232 808.5 511 80.4
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 6.4e-232 807.4 493 84.0
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 6.4e-232 807.4 506 83.4
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 2.4e-231 805.4 511 80.8
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 3.2e-231 805.1 511 80.6
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 3.2e-231 805.1 511 80.6
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 9.3e-231 803.5 511 80.4
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 1.2e-230 803.1 473 88.4
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.2e-230 803.1 495 83.2
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 2.7e-230 802.0 495 84.2
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 3.0e-229 798.5 495 81.8
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 8.7e-229 797.0 495 82.2
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 3.3e-228 795.0 557 76.3
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 5.6e-228 794.3 548 76.1
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 1.1e-226 790.0 495 83.0
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 2.4e-226 788.9 511 77.7
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 2.4e-226 788.9 511 79.1
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 9.0e-226 786.9 511 81.2
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.6e-222 776.2 511 76.9
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.6e-222 776.2 512 79.1
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 6.0e-222 774.2 512 79.1
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 8.2e-219 763.8 525 77.0
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 8.2e-219 763.8 525 77.0
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 3.4e-217 758.4 511 77.7
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 1.2e-206 723.4 441 83.7
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 4.4e-204 714.9 473 81.2
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 7.9e-198 694.1 512 73.2
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 4.4e-196 688.3 504 73.6
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 1.3e-192 676.8 414 83.8
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.9e-192 675.6 511 71.6
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 2.5e-191 672.5 514 66.0
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.0e-189 665.2 503 67.8
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 3.0e-181 639.0 504 71.4
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.3e-179 633.6 514 62.3
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 3.8e-176 622.1 469 69.9
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.2e-172 610.5 376 82.2
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 7.8e-169 597.8 365 86.0
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.5e-167 593.6 366 84.7
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.2e-166 590.5 522 58.8
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 5.2e-165 585.1 511 59.1
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 6.8e-165 584.7 494 60.1
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 2.6e-164 582.8 379 78.9
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 3.3e-159 565.8 325 90.8
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 4.3e-159 565.5 499 56.1
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 4.9e-155 552.0 348 83.0
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-150 537.0 458 67.9
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 4.0e-149 532.3 307 90.9
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.0e-141 505.8 284 93.0
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 2.0e-132 476.9 383 63.2
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.9e-116 421.4 255 83.1
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.1e-113 413.7 245 88.6
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 2.7e-113 413.3 517 46.0
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 1.2e-105 387.9 487 44.4
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.5e-105 386.3 386 54.4
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.5e-100 370.9 279 70.3
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 1.1e-98 364.8 520 39.0
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 7.4e-79 298.9 200 80.5
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.2e-72 276.2 343 46.6
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 2.7e-68 263.8 504 38.1
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 4.2e-58 229.9 144 81.9
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.6e-57 226.9 313 45.0
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 6.3e-54 216.1 369 40.7
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 1.2e-47 195.3 117 80.3
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.2e-45 187.2 206 53.4
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.5e-44 183.7 143 71.3
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.6e-42 176.4 197 51.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 1.9e-34 151.4 106 72.6
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-30 137.9 119 58.8
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.3e-27 128.6 82 82.9
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 5.4e-21 106.7 156 46.8
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 8.7e-11 72.8 107 43.9
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 5.6e-10 70.1 39 84.6
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-08 65.9 37 83.8


User provided reference genes

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