Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018618 Daucus carota HOM05D005662 ORTHO05D007004 8.4e-83 310.5 174 100.0
DCAR_015743 Daucus carota HOM05D005662 ORTHO05D007004 2.1e-49 199.5 136 75.7
DCAR_021652 Daucus carota HOM05D000949 ORTHO05D001276 3.1e-37 159.1 103 81.6
Potri.012G128500 Populus trichocarpa HOM05D005662 ORTHO05D007004 2.3e-32 142.9 136 55.1
DCAR_023430 Daucus carota HOM05D005662 ORTHO05D004064 4.0e-32 142.1 75 89.3
Sabra12G0096500 Salix brachista HOM05D005662 ORTHO05D007004 2.2e-30 136.3 137 56.2
Dinv22971 Davidia involucrata HOM05D005662 ORTHO05D007004 3.7e-30 135.6 138 50.7
Manes.06G137000 Manihot esculenta HOM05D005662 ORTHO05D007004 6.3e-30 134.8 136 49.3
Hund04625 Selenicereus undatus HOM05D005662 ORTHO05D007004 6.3e-30 134.8 138 51.4
TWI39G1176 Tripterygium wilfordii HOM05D005662 ORTHO05D007004 6.3e-30 134.8 136 48.5
Nitab4.5_0000072g0480 Nicotiana tabacum HOM05D005662 ORTHO05D007004 8.3e-30 134.4 138 55.1
CANSAT56G2670 Cannabis sativa HOM05D005662 ORTHO05D007004 1.4e-29 133.7 136 50.7
Actinidia25029 Actinidia chinensis HOM05D005662 ORTHO05D007004 4.1e-29 132.1 137 48.9
CSS0015308 Camellia sinensis var. sinensis HOM05D005662 ORTHO05D007004 7.0e-29 131.3 136 51.5
Nitab4.5_0000481g0050 Nicotiana tabacum HOM05D005662 ORTHO05D007004 7.0e-29 131.3 136 52.9
vmacro06774 Vaccinium macrocarpon HOM05D005662 ORTHO05D007004 7.0e-29 131.3 138 50.0
Potri.015G129900 Populus trichocarpa HOM05D005662 ORTHO05D007004 2.0e-28 129.8 136 52.2
Thecc.03G160400 Theobroma cacao HOM05D005662 ORTHO05D007004 2.7e-28 129.4 136 52.2
CiPaw.03G096300 Carya illinoinensis HOM05D005662 ORTHO05D007004 4.5e-28 128.6 136 47.8
Peaxi162Scf01372g00048 Petunia axillaris HOM05D005662 ORTHO05D007004 5.9e-28 128.3 136 52.2
Gohir.D07G210500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 7.7e-28 127.9 138 50.0
Gorai.001G237900 Gossypium raimondii HOM05D005662 ORTHO05D007004 7.7e-28 127.9 138 50.0
MSTRG.8809 Avicennia marina HOM05D005662 ORTHO05D007004 1.0e-27 127.5 136 52.2
COL.COLO4_14166 Corchorus olitorius HOM05D005662 ORTHO05D007004 1.0e-27 127.5 136 48.5
MBI12_g31644_MAGBIO Magnolia biondii HOM05D005662 ORTHO05D007004 1.0e-27 127.5 137 51.1
Prupe.2G281200 Prunus persica HOM05D005662 ORTHO05D007004 1.0e-27 127.5 136 53.7
Solyc03g083540.3 Solanum lycopersicum HOM05D005662 ORTHO05D007004 1.3e-27 127.1 136 52.9
Sopen03g023350 Solanum pennellii HOM05D005662 ORTHO05D007004 1.3e-27 127.1 136 52.9
Cc02_g04010 Coffea canephora HOM05D005662 ORTHO05D007004 1.7e-27 126.7 136 50.0
FvH4_7g28050 Fragaria vesca HOM05D005662 ORTHO05D007004 1.7e-27 126.7 136 52.9
MD01G1184800 Malus domestica HOM05D005662 ORTHO05D007004 1.7e-27 126.7 138 50.7
Ciclev10005797m.g Citrus clementina HOM05D005662 ORTHO05D007004 2.3e-27 126.3 137 50.4
Dinv28543 Davidia involucrata HOM05D005662 ORTHO05D007004 2.3e-27 126.3 138 48.6
Gohir.A07G204500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 3.8e-27 125.6 138 51.4
Atru.chr1.651 Acer truncatum HOM05D005662 ORTHO05D007004 6.5e-27 124.8 137 50.4
QL09p018886 Quercus lobata HOM05D005662 ORTHO05D007004 8.6e-27 124.4 137 53.3
SalBow4G2223 Salvia bowleyana HOM05D005662 ORTHO05D007004 1.1e-26 124.0 136 50.7
SalBow4G3324 Salvia bowleyana HOM05D005662 ORTHO05D007004 1.1e-26 124.0 136 50.7
Nn4g26371 Nelumbo nucifera HOM05D005662 ORTHO05D007004 1.5e-26 123.6 158 49.4
PGSC0003DMG400023012 Solanum tuberosum HOM05D005662 ORTHO05D007004 1.5e-26 123.6 136 52.2
TAR374G0299 Trochodendron aralioides HOM05D005662 ORTHO05D007004 1.5e-26 123.6 142 49.3
Actinidia13561 Actinidia chinensis HOM05D005662 ORTHO05D007004 1.9e-26 123.2 137 44.5
ECA232G3412 Erigeron canadensis HOM05D005662 ORTHO05D007004 1.9e-26 123.2 138 51.4
MD07G1257000 Malus domestica HOM05D005662 ORTHO05D007004 1.9e-26 123.2 136 52.2
RcHm_v2.0_Chr1g0374961 Rosa chinensis HOM05D005662 ORTHO05D007004 1.9e-26 123.2 136 51.5
Sp2g25490 Schrenkiella parvula HOM05D005662 ORTHO05D007004 1.9e-26 123.2 136 48.5
Lsat_1_v5_gn_8_9401 Lactuca sativa HOM05D005662 ORTHO05D007004 2.5e-26 122.9 138 47.8
TAR375G0912 Trochodendron aralioides HOM05D005662 ORTHO05D007004 2.5e-26 122.9 141 49.6
THA.LOC104821401 Tarenaya hassleriana HOM05D005662 ORTHO05D007004 5.5e-26 121.7 137 48.9
Duzib205G1232 Durio zibethinus HOM05D005662 ORTHO05D007004 1.2e-25 120.6 136 47.8
Migut.F00442 Erythranthe guttata HOM05D005662 ORTHO05D007004 1.2e-25 120.6 136 50.0
SGA_v2.0_scaffold2G01165 Striga asiatica HOM05D005662 ORTHO05D007004 1.2e-25 120.6 142 50.0
Hma1.2p1_0654F.1_g196460 Hydrangea macrophylla HOM05D005662 ORTHO05D007004 1.6e-25 120.2 136 50.0
Cfa008223 Carpinus fangiana HOM05D000922 ORTHO05D007004 2.1e-25 119.8 142 50.7
Ca_30761_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 2.1e-25 119.8 137 47.4
GSVIVG01018540001 Vitis vinifera HOM05D005662 ORTHO05D007004 6.1e-25 118.2 136 48.5
HanXRQChr08g0223561 Helianthus annuus HOM05D005662 ORTHO05D007004 8.0e-25 117.9 138 50.0
Oeu039209.1 Olea europaea HOM05D005662 ORTHO05D007004 1.0e-24 117.5 136 51.5
Eucgr.K00149 Eucalyptus grandis HOM05D005662 ORTHO05D007004 1.8e-24 116.7 137 48.2
A02p42240 Brassica napus HOM05D005662 ORTHO05D007004 3.0e-24 115.9 137 43.8
Thhalv10004861m.g Eutrema salsugineum HOM05D005662 ORTHO05D007004 3.0e-24 115.9 137 49.6
C02p62090 Brassica napus HOM05D005662 ORTHO05D007004 8.9e-24 114.4 139 48.9
SGA_v2.0_scaffold486G52387 Striga asiatica HOM05D005662 ORTHO05D007004 8.9e-24 114.4 136 45.6
AL8G39110 Arabidopsis lyrata HOM05D005662 ORTHO05D007004 2.0e-23 113.2 138 45.7
BcaB07g29785 Brassica carinata HOM05D005662 ORTHO05D007004 2.6e-23 112.8 141 44.7
Lalb_Chr15g0077021 Lupinus albus HOM05D005662 ORTHO05D007004 2.6e-23 112.8 134 45.5
Carub.0008s2298 Capsella rubella HOM05D005662 ORTHO05D007004 3.4e-23 112.5 137 45.3
Atru.chr1.654 Acer truncatum HOM05D005662 ORTHO05D007004 4.4e-23 112.1 140 46.4
Aqoxy7G00656 Aquilegia oxysepala HOM05D005662 ORTHO05D007004 4.4e-23 112.1 138 46.4
PGR142G0586 Punica granatum HOM05D005662 ORTHO05D007004 4.4e-23 112.1 137 47.4
VMungo1127G2067 Vigna mungo HOM05D005662 ORTHO05D007004 5.7e-23 111.7 135 45.9
AT5G62290 Arabidopsis thaliana HOM05D005662 ORTHO05D007004 9.8e-23 110.9 137 46.0
BraA02t09152Z Brassica rapa HOM05D005662 ORTHO05D007004 9.8e-23 110.9 156 41.7
HanXRQChr16g0512531 Helianthus annuus HOM05D005662 ORTHO05D007004 1.3e-22 110.5 141 46.1
Medtr4g033850 Medicago truncatula HOM05D005662 ORTHO05D007004 2.2e-22 109.8 137 44.5
Phvul.011G004300 Phaseolus vulgaris HOM05D005662 ORTHO05D007004 2.2e-22 109.8 135 46.7
CARHR276070 Cardamine hirsuta HOM05D005662 ORTHO05D007004 2.8e-22 109.4 140 50.0
Aa31LG11G1300 Aethionema arabicum HOM05D005662 ORTHO05D007004 3.7e-22 109.0 136 47.1
EL10Ac3g05805 Beta vulgaris HOM05D005662 ORTHO05D007004 3.7e-22 109.0 143 44.1
unitig_37.g12504 Utricularia gibba HOM05D005662 ORTHO05D007004 3.7e-22 109.0 136 48.5
Psat7g191960 Pisum sativum HOM05D005662 ORTHO05D007004 6.3e-22 108.2 140 47.1
MELO3C005412.2 Cucumis melo HOM05D005662 ORTHO05D007004 8.3e-22 107.8 145 48.3
arahy.Tifrunner.gnm1.ann1.LZP622 Arachis hypogaea HOM05D005662 ORTHO05D007004 1.1e-21 107.5 136 44.1
Glyma.09G233200 Glycine max HOM05D005662 ORTHO05D007004 1.4e-21 107.1 135 44.4
Lalb_Chr04g0260971 Lupinus albus HOM05D005662 ORTHO05D007004 1.4e-21 107.1 136 42.6
arahy.Tifrunner.gnm1.ann1.TMT042 Arachis hypogaea HOM05D005662 ORTHO05D007004 2.4e-21 106.3 136 44.1
Rhsim03G0170700 Rhododendron simsii HOM05D005662 ORTHO05D007004 3.1e-21 105.9 189 34.9
BolC3t18716H Brassica oleracea HOM05D005662 ORTHO05D007004 4.1e-21 105.5 140 44.3
arahy.Tifrunner.gnm1.ann1.93Q1AU Arachis hypogaea HOM05D005662 ORTHO05D007004 5.4e-21 105.1 136 43.4
C03p64570 Brassica napus HOM05D000207 ORTHO05D001482 5.4e-21 105.1 139 44.6
TPR.G15119 Trifolium pratense HOM05D005662 ORTHO05D007004 5.4e-21 105.1 137 43.1
arahy.Tifrunner.gnm1.ann1.QSR7PX Arachis hypogaea HOM05D005662 ORTHO05D007004 9.2e-21 104.4 136 43.4
CDE02G0217 Ceratophyllum demersum HOM05D005662 ORTHO05D007004 4.5e-20 102.1 138 43.5
Sed0027239 Sechium edule HOM05D005662 ORTHO05D007004 4.5e-20 102.1 145 44.1
HPP92_004603 Vanilla planifolia HOM05D005662 ORTHO05D007004 1.3e-19 100.5 137 42.3
PSO478G4436 Papaver somniferum HOM05D005662 ORTHO05D007004 1.7e-19 100.1 153 38.6
PSO782G3258 Papaver somniferum HOM05D005662 ORTHO05D007004 2.9e-19 99.4 141 39.7
A06p29040 Brassica napus HOM05D000207 ORTHO05D001482 1.1e-18 97.4 140 42.1
BraA06t25849Z Brassica rapa HOM05D005662 ORTHO05D007004 1.1e-18 97.4 142 41.5
Glyma.14G044000 Glycine max HOM05D005662 ORTHO05D007004 1.1e-18 97.4 135 41.5
Ca_00244_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 1.5e-18 97.1 108 49.1
ATR0733G084 Amborella trichopoda HOM05D005662 ORTHO05D007004 2.5e-18 96.3 141 41.1
Duzib084G0609 Durio zibethinus HOM05D005662 ORTHO05D007004 2.5e-18 96.3 136 41.9
Lj3g0023650 Lotus japonicus HOM05D005662 ORTHO05D007004 7.3e-18 94.7 146 39.7
Ah.13g067330 Amaranthus hybridus HOM05D005662 ORTHO05D007004 6.1e-17 91.7 74 55.4
Haze_13835 Corylus avellana HOM05D005662 ORTHO05D007004 1.0e-16 90.9 99 50.5
CAN.G152.22 Capsicum annuum HOM05D005662 ORTHO05D007004 1.4e-16 90.5 74 63.5
BcaC03g18141 Brassica carinata HOM05D000207 ORTHO05D001482 2.0e-15 86.7 75 53.3
ClCG01G005160 Citrullus lanatus HOM05D005662 ORTHO05D007004 5.8e-15 85.1 183 36.1
AUR62016115 Chenopodium quinoa HOM05D005662 ORTHO05D007004 1.3e-14 84.0 74 55.4
Sed0014362 Sechium edule HOM05D005662 ORTHO05D007004 1.3e-14 84.0 145 41.4
Zm00001eb224250 Zea mays HOM05D005662 ORTHO05D007004 8.3e-14 81.3 144 38.2
AUR62035061 Chenopodium quinoa HOM05D005662 ORTHO05D007004 1.1e-13 80.9 85 51.8
Os10g0170000 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 2.4e-13 79.7 139 38.8
SMO351G0592 Selaginella moellendorffii HOM05D005662 ORTHO05D007004 7.0e-13 78.2 125 38.4
Os03g0249300 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 2.0e-12 76.6 143 39.2
Lsat_1_v5_gn_9_52481 Lactuca sativa HOM05D005662 ORTHO05D007004 1.7e-11 73.6 140 37.9
SEGI_33447 Sequoiadendron giganteum HOM05D005662 ORTHO05D007004 1.7e-11 73.6 133 38.3
Sabra15G0143400 Salix brachista HOM05D005662 ORTHO05D007004 5.6e-10 68.6 109 39.4
DCAR_026119 Daucus carota HOM05D000323 ORTHO05D000201 1.2e-09 67.4 77 54.5
Pp3c16_14910 Physcomitrium patens HOM05D005662 ORTHO05D007004 1.4e-08 63.9 112 35.7
Mapoly0005s0155 Marchantia polymorpha HOM05D005662 ORTHO05D007004 3.1e-08 62.8 106 33.0
Zm00001eb010690 Zea mays HOM05D005662 ORTHO05D007004 4.0e-08 62.4 171 31.6
arahy.Tifrunner.gnm1.ann1.8PDC51 Arachis hypogaea HOM05D005662 ORTHO05D007004 2.0e-07 60.1 96 42.7
Pp3c5_5760 Physcomitrium patens HOM05D005662 ORTHO05D007004 3.4e-07 59.3 118 37.3
CBR_g40194 Chara braunii HOM05D005662 ORTHO05D007004 9.8e-07 57.8 144 31.2
Ciclev10006356m.g Citrus clementina HOM05D005662 ORTHO05D007004 1.3e-06 57.4 54 53.7
BolC2t12268H Brassica oleracea HOM05D005662 ORTHO05D007004 4.9e-06 55.5 55 47.3


User provided reference genes

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