Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 3.8e-118 428.3 236 100.0
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 5.4e-48 195.3 249 49.8
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 1.6e-47 193.7 242 49.2
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.1e-45 187.6 249 49.0
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 2.7e-44 183.0 244 48.4
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 6.1e-44 181.8 245 47.8
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.7e-41 173.7 252 45.6
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.8e-41 172.9 241 49.4
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 3.7e-41 172.6 245 46.9
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 6.3e-41 171.8 243 49.0
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.1e-40 171.0 246 46.7
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.1e-40 171.0 245 45.7
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 7.0e-40 168.3 248 49.2
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 7.0e-40 168.3 244 47.5
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.0e-39 166.8 240 44.2
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 3.5e-39 166.0 252 44.0
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 3.5e-39 166.0 246 47.6
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 4.5e-39 165.6 243 47.3
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 5.9e-39 165.2 255 47.8
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.0e-38 164.5 253 46.2
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.0e-38 164.5 244 45.9
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.3e-38 164.1 246 47.6
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.7e-38 163.7 246 47.2
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 2.3e-38 163.3 241 45.6
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 3.8e-38 162.5 246 44.7
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 3.8e-38 162.5 251 43.0
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 1.5e-37 160.6 238 44.1
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.9e-37 160.2 249 43.0
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 2.5e-37 159.8 253 44.7
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 4.3e-37 159.1 243 45.7
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 4.3e-37 159.1 242 45.0
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 5.6e-37 158.7 256 43.8
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 7.2e-37 158.3 247 42.9
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 7.2e-37 158.3 242 45.0
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 9.5e-37 157.9 239 43.5
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 9.5e-37 157.9 244 45.5
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 9.5e-37 157.9 242 45.0
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.2e-36 157.5 254 45.3
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.2e-36 157.5 244 45.5
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 1.6e-36 157.1 249 44.2
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.6e-36 156.0 245 44.1
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 4.7e-36 155.6 246 44.3
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 4.7e-36 155.6 247 44.5
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 6.1e-36 155.2 256 43.4
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 8.0e-36 154.8 251 45.4
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 8.0e-36 154.8 251 43.4
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.0e-35 154.5 245 43.3
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 1.4e-35 154.1 243 42.8
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.4e-35 154.1 243 46.1
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 1.8e-35 153.7 249 44.6
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 1.8e-35 153.7 237 40.1
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 1.8e-35 153.7 237 40.1
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.3e-35 153.3 244 44.3
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 6.8e-35 151.8 244 44.3
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.2e-34 151.0 244 43.0
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 2.6e-34 149.8 244 43.0
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 5.7e-34 148.7 243 41.6
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 5.7e-34 148.7 251 43.4
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 9.8e-34 147.9 249 40.6
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.3e-33 147.5 248 44.0
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 2.2e-33 146.7 246 44.3
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 6.4e-33 145.2 244 42.2
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 6.4e-33 145.2 260 40.0
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.4e-32 144.1 249 41.4
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 2.4e-32 143.3 247 40.9
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.2e-32 142.9 241 38.2
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 3.2e-32 142.9 247 42.1
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.4e-32 142.1 245 42.4
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 9.2e-32 141.4 243 41.6
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 2.7e-31 139.8 248 39.1
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 3.5e-31 139.4 247 39.3
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 5.9e-31 138.7 246 41.5
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.0e-30 137.9 245 39.6
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.3e-30 137.5 242 42.6
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 1.3e-30 137.5 241 40.7
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 3.0e-30 136.3 244 41.4
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 3.0e-30 136.3 243 41.6
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 5.0e-30 135.6 249 41.8
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 8.6e-30 134.8 246 39.0
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 8.6e-30 134.8 243 41.2
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 8.6e-30 134.8 244 41.0
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.1e-29 134.4 245 39.6
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.5e-29 134.0 248 41.1
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.5e-29 134.0 241 38.6
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 1.9e-29 133.7 260 39.6
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 2.5e-29 133.3 249 42.6
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 4.3e-29 132.5 243 39.1
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 5.6e-29 132.1 245 38.8
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 5.6e-29 132.1 242 38.4
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 7.3e-29 131.7 191 45.5
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 7.3e-29 131.7 241 37.3
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 9.5e-29 131.3 239 41.0
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 1.2e-28 131.0 234 42.3
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.6e-28 130.6 246 39.4
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.6e-28 130.6 242 39.3
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.6e-28 130.6 243 39.1
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.6e-28 130.6 239 41.4
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 3.6e-28 129.4 248 42.3
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 4.7e-28 129.0 239 38.5
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 4.7e-28 129.0 244 39.8
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 1.0e-27 127.9 238 39.9
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.0e-27 127.9 242 39.3
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 1.4e-27 127.5 239 41.4
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 1.8e-27 127.1 243 37.9
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 1.8e-27 127.1 214 37.9
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 1.8e-27 127.1 246 39.0
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 3.1e-27 126.3 242 37.2
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 3.1e-27 126.3 243 37.4
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 4.0e-27 125.9 242 38.0
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 1.2e-26 124.4 253 39.9
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 1.5e-26 124.0 260 40.0
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 2.0e-26 123.6 248 37.9
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 2.6e-26 123.2 238 39.9
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.6e-26 123.2 239 39.7
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.4e-26 122.5 240 38.8
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 7.5e-26 121.7 212 36.8
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 7.5e-26 121.7 252 40.9
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 7.5e-26 121.7 239 38.9
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.3e-25 120.9 239 36.8
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 2.2e-25 120.2 239 36.8
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 3.7e-25 119.4 246 37.0
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 3.7e-25 119.4 237 38.4
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 4.9e-25 119.0 242 35.5
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 1.9e-24 117.1 262 36.3
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 2.4e-24 116.7 241 38.6
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 4.1e-24 115.9 242 38.4
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 4.1e-24 115.9 242 38.4
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.2e-23 114.4 238 37.8
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 1.6e-23 114.0 235 36.6
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 3.5e-23 112.8 279 32.3
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 6.0e-23 112.1 119 55.5
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 1.0e-22 111.3 119 56.3
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.7e-22 110.5 232 37.9
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 3.0e-22 109.8 287 34.1
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 3.0e-22 109.8 277 41.2
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 3.0e-22 109.8 259 36.7
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 3.9e-22 109.4 234 37.6
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 8.6e-22 108.2 239 34.3
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.9e-21 107.1 236 36.4
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 1.9e-21 107.1 234 36.3
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.6e-20 102.8 122 52.5
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 8.1e-20 101.7 119 53.8
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 5.2e-19 99.0 246 38.2
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 6.8e-19 98.6 229 33.6
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 7.5e-18 95.1 206 36.4
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 1.4e-16 90.9 183 33.9
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 5.4e-16 89.0 89 57.3
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 2.3e-14 83.6 97 56.7
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 8.6e-14 81.6 120 43.3
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.5e-13 80.9 97 52.6
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 2.5e-13 80.1 89 53.9
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 2.5e-13 80.1 198 33.8
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 2.8e-12 76.6 112 45.5
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 3.6e-12 76.3 81 54.3
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 4.0e-11 72.8 134 44.0
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 4.0e-11 72.8 199 35.2
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 5.2e-11 72.4 159 37.1
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 5.2e-11 72.4 100 47.0
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 6.8e-11 72.0 55 61.8
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 2.0e-10 70.5 85 54.1
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 1.4e-08 64.3 47 66.0
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 1.4e-08 64.3 93 47.3
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 7.1e-08 62.0 86 45.3
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 7.1e-08 62.0 56 57.1
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 9.2e-08 61.6 101 47.5
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 1.2e-07 61.2 56 57.1
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 1.0e-06 58.2 213 26.8


User provided reference genes

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