Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018407 Daucus carota HOM05D001177 ORTHO05D001507 1.0e-102 376.7 187 100.0
DCAR_022970 Daucus carota HOM05D001177 ORTHO05D001507 3.6e-55 218.8 128 84.4
DCAR_013927 Daucus carota HOM05D001177 ORTHO05D001507 4.3e-24 115.5 120 49.2
vmacro04414 Vaccinium macrocarpon HOM05D001177 ORTHO05D001507 2.0e-21 106.7 123 46.3
Lsat_1_v5_gn_9_45300 Lactuca sativa HOM05D001177 ORTHO05D001507 3.4e-21 105.9 128 46.9
CSS0004147 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 9.8e-21 104.4 120 46.7
CSS0025485 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 9.8e-21 104.4 120 46.7
Cc00_g24750 Coffea canephora HOM05D001177 ORTHO05D001507 9.8e-21 104.4 131 47.3
Oeu026026.1 Olea europaea HOM05D001177 ORTHO05D001507 1.3e-20 104.0 123 45.5
ECA232G4523 Erigeron canadensis HOM05D001177 ORTHO05D001507 2.9e-20 102.8 121 44.6
Lj4P807T8 Lonicera japonica HOM05D001177 ORTHO05D001507 8.3e-20 101.3 127 44.1
Potri.005G252100 Populus trichocarpa HOM05D001177 ORTHO05D001507 1.4e-19 100.5 125 47.2
Glyma.06G017400 Glycine max HOM05D001177 ORTHO05D001507 1.9e-19 100.1 121 47.1
Actinidia15502 Actinidia chinensis HOM05D001177 ORTHO05D001507 3.2e-19 99.4 135 43.0
Rhsim07G0256600 Rhododendron simsii HOM05D001177 ORTHO05D001507 3.2e-19 99.4 123 43.1
Actinidia17052 Actinidia chinensis HOM05D001177 ORTHO05D001507 7.1e-19 98.2 123 44.7
Ca_15413_v3 Cicer arietinum L. HOM05D001177 ORTHO05D001507 9.2e-19 97.8 128 43.0
Manes.05G123800 Manihot esculenta HOM05D001177 ORTHO05D001507 3.5e-18 95.9 124 44.4
HanXRQChr05g0144871 Helianthus annuus HOM05D001177 ORTHO05D001507 4.6e-18 95.5 123 40.7
Lj1g0026276 Lotus japonicus HOM05D001177 ORTHO05D001507 4.6e-18 95.5 126 45.2
Solyc12g094670.1 Solanum lycopersicum HOM05D001177 ORTHO05D001507 4.6e-18 95.5 122 40.2
Sopen12g031570 Solanum pennellii HOM05D001177 ORTHO05D001507 4.6e-18 95.5 122 39.3
RcHm_v2.0_Chr7g0215561 Rosa chinensis HOM05D001177 ORTHO05D001507 7.8e-18 94.7 120 45.8
Sabra05G0195500 Salix brachista HOM05D001177 ORTHO05D001507 7.8e-18 94.7 125 45.6
PGR031G2008 Punica granatum HOM05D001177 ORTHO05D001507 1.0e-17 94.4 132 41.7
Peaxi162Scf00064g00123 Petunia axillaris HOM05D001177 ORTHO05D001507 2.3e-17 93.2 124 41.9
Aqoxy6G01632 Aquilegia oxysepala HOM05D001177 ORTHO05D001507 3.0e-17 92.8 118 39.8
Migut.O00321 Erythranthe guttata HOM05D001177 ORTHO05D001507 3.0e-17 92.8 121 43.0
Rhsim06G0006200 Rhododendron simsii HOM05D001177 ORTHO05D001507 3.0e-17 92.8 121 40.5
Oeu000701.1 Olea europaea HOM05D001177 ORTHO05D001507 3.9e-17 92.4 124 38.7
CANSAT56G4464 Cannabis sativa HOM05D001177 ORTHO05D001507 5.1e-17 92.0 141 36.9
Duzib093G1667 Durio zibethinus HOM05D001177 ORTHO05D001507 5.1e-17 92.0 132 43.9
SGA_v2.0_scaffold319G48550 Striga asiatica HOM05D001177 ORTHO05D001507 5.1e-17 92.0 126 42.1
Gohir.D01G089800 Gossypium hirsutum HOM05D001177 ORTHO05D001507 6.6e-17 91.7 135 44.4
Hma1.2p1_0507F.1_g168660 Hydrangea macrophylla HOM05D001177 ORTHO05D001507 6.6e-17 91.7 124 45.2
Nitab4.5_0000407g0100 Nicotiana tabacum HOM05D001177 ORTHO05D001507 6.6e-17 91.7 123 39.0
PGSC0003DMG400029403 Solanum tuberosum HOM05D001177 ORTHO05D001507 8.6e-17 91.3 122 37.7
Dinv31955 Davidia involucrata HOM05D001177 ORTHO05D001507 1.1e-16 90.9 124 41.9
Nn5g30978 Nelumbo nucifera HOM05D001177 ORTHO05D001507 1.1e-16 90.9 123 40.7
EL10Ac1g00901 Beta vulgaris HOM05D001177 ORTHO05D001507 1.5e-16 90.5 124 39.5
Gohir.A01G104600 Gossypium hirsutum HOM05D001177 ORTHO05D001507 1.5e-16 90.5 135 44.4
Gorai.002G115500 Gossypium raimondii HOM05D001177 ORTHO05D001507 1.9e-16 90.1 135 44.4
Psat5g010720 Pisum sativum HOM05D001177 ORTHO05D001507 1.9e-16 90.1 121 41.3
Nitab4.5_0004470g0060 Nicotiana tabacum HOM05D001177 ORTHO05D001507 2.5e-16 89.7 124 37.9
TAR376G0130 Trochodendron aralioides HOM05D001177 ORTHO05D001507 2.5e-16 89.7 122 44.3
Nitab4.5_0006485g0030 Nicotiana tabacum HOM05D001177 ORTHO05D001507 3.3e-16 89.4 123 39.8
COL.COLO4_36409 Corchorus olitorius HOM05D001177 ORTHO05D001507 9.5e-16 87.8 127 47.2
Ciclev10033880m.g Citrus clementina HOM05D001177 ORTHO05D001507 1.2e-15 87.4 143 39.2
Medtr3g115540 Medicago truncatula HOM05D001177 ORTHO05D001507 1.2e-15 87.4 120 40.8
Nn6g31712 Nelumbo nucifera HOM05D001177 ORTHO05D001507 1.2e-15 87.4 122 41.0
SalBow7G2910 Salvia bowleyana HOM05D001177 ORTHO05D001507 1.6e-15 87.0 121 42.1
Thecc.08G060900 Theobroma cacao HOM05D001177 ORTHO05D001507 2.1e-15 86.7 125 47.2
Cfa014098 Carpinus fangiana HOM05D001177 ORTHO05D001507 2.8e-15 86.3 122 43.4
CiPaw.07G137100 Carya illinoinensis HOM05D001177 ORTHO05D001507 2.8e-15 86.3 122 41.0
Haze_22812 Corylus avellana HOM05D001177 ORTHO05D001507 2.8e-15 86.3 122 45.1
Eucgr.F03568 Eucalyptus grandis HOM05D001177 ORTHO05D001507 2.8e-15 86.3 127 40.2
Prupe.5G010400 Prunus persica HOM05D001177 ORTHO05D001507 3.6e-15 85.9 121 39.7
MD06G1009800 Malus domestica HOM05D001177 ORTHO05D001507 4.7e-15 85.5 124 40.3
ClCG08G009310 Citrullus lanatus HOM05D001177 ORTHO05D001507 6.2e-15 85.1 107 45.8
Lalb_Chr11g0061541 Lupinus albus HOM05D001177 ORTHO05D001507 1.1e-14 84.3 121 43.8
Lalb_Chr23g0265721 Lupinus albus HOM05D001177 ORTHO05D001507 1.1e-14 84.3 120 40.8
PGSC0003DMG400041816 Solanum tuberosum HOM05D001177 ORTHO05D001507 1.1e-14 84.3 115 44.3
AUR62035128 Chenopodium quinoa HOM05D001177 ORTHO05D001507 1.4e-14 84.0 123 35.8
MELO3C026529.2 Cucumis melo HOM05D001177 ORTHO05D001507 1.4e-14 84.0 108 44.4
CsaV3_6G031430 Cucumis sativus L. HOM05D001177 ORTHO05D001507 1.8e-14 83.6 108 44.4
Phvul.009G011700 Phaseolus vulgaris HOM05D001177 ORTHO05D001507 1.8e-14 83.6 120 40.8
GSVIVG01013379001 Vitis vinifera HOM05D001177 ORTHO05D001507 1.8e-14 83.6 122 38.5
arahy.Tifrunner.gnm1.ann1.50T0BQ Arachis hypogaea HOM05D001177 ORTHO05D001507 2.3e-14 83.2 127 39.4
QL02p014605 Quercus lobata HOM05D001177 ORTHO05D001507 4.0e-14 82.4 125 44.8
TWI56G1312 Tripterygium wilfordii HOM05D001177 ORTHO05D001507 4.0e-14 82.4 120 42.5
Manes.18G004100 Manihot esculenta HOM05D001177 ORTHO05D001507 6.8e-14 81.6 120 43.3
Sed0014177 Sechium edule HOM05D001177 ORTHO05D001507 6.8e-14 81.6 122 43.4
PGSC0003DMG400029404 Solanum tuberosum HOM05D001177 ORTHO05D001507 6.8e-14 81.6 113 43.4
TAR628G0757 Trochodendron aralioides HOM05D001177 ORTHO05D001507 6.8e-14 81.6 121 39.7
TWI36G1264 Tripterygium wilfordii HOM05D001177 ORTHO05D001507 1.2e-13 80.9 132 40.2
Aqoxy5G01019 Aquilegia oxysepala HOM05D001177 ORTHO05D001507 2.6e-13 79.7 104 39.4
MBI08_g26555_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D001507 4.4e-13 79.0 124 40.3
VMungo1309G1887 Vigna mungo HOM05D001177 ORTHO05D001507 4.4e-13 79.0 121 38.8
FvH4_5g25330 Fragaria vesca HOM05D001177 ORTHO05D001507 1.3e-12 77.4 121 38.8
FAN04G0289 Fragaria x ananassa HOM05D001177 ORTHO05D001507 1.7e-12 77.0 121 38.8
TAR381G0649 Trochodendron aralioides HOM05D001177 ORTHO05D001507 1.7e-12 77.0 122 40.2
Sopen04g036140 Solanum pennellii HOM05D001177 ORTHO05D001507 2.2e-12 76.6 105 38.1
Solyc04g082520.3 Solanum lycopersicum HOM05D001177 ORTHO05D001507 2.9e-12 76.3 105 38.1
Ah.11g041610 Amaranthus hybridus HOM05D001177 ORTHO05D001507 3.7e-12 75.9 126 37.3
HPP92_022689 Vanilla planifolia HOM05D001177 ORTHO05D001507 3.7e-12 75.9 104 39.4
FAN18G0207 Fragaria x ananassa HOM05D001177 ORTHO05D001507 4.9e-12 75.5 121 38.0
Atru.chr13.125 Acer truncatum HOM05D001177 ORTHO05D001507 8.4e-12 74.7 111 36.9
PSO541G2533 Papaver somniferum HOM05D001177 ORTHO05D001507 1.4e-11 73.9 113 38.1
ATR0807G028 Amborella trichopoda HOM05D001177 ORTHO05D001507 2.4e-11 73.2 102 37.3
Aa31LG6G2570 Aethionema arabicum HOM05D001177 ORTHO05D001507 4.1e-11 72.4 120 35.8
Thhalv10027280m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 4.1e-11 72.4 123 35.8
AL7G13400 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 5.4e-11 72.0 125 36.0
THA.LOC104801955 Tarenaya hassleriana HOM05D001177 ORTHO05D001507 7.1e-11 71.6 123 35.8
CDE05G3383 Ceratophyllum demersum HOM05D001177 ORTHO05D001507 2.1e-10 70.1 114 35.1
CARHR245800 Cardamine hirsuta HOM05D001177 ORTHO05D001507 2.7e-10 69.7 123 35.0
CDE05G2199 Ceratophyllum demersum HOM05D001177 ORTHO05D001507 4.6e-10 68.9 127 33.9
PSO675G0647 Papaver somniferum HOM05D001177 ORTHO05D001507 6.0e-10 68.6 111 36.0
Carub.0007s0288 Capsella rubella HOM05D001177 ORTHO05D001507 7.8e-10 68.2 124 35.5
AT4G37420 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 1.0e-09 67.8 124 34.7
Sp7g35080 Schrenkiella parvula HOM05D001177 ORTHO05D001507 1.0e-09 67.8 123 35.0
Ciclev10000715m.g Citrus clementina HOM05D001177 ORTHO05D001507 1.3e-09 67.4 121 39.7
Os06g0727900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D001507 1.5e-08 63.9 127 34.6
A01p01600 Brassica napus HOM05D001177 ORTHO05D001507 2.5e-08 63.2 124 30.6
BraA01t00151Z Brassica rapa HOM05D001177 ORTHO05D001507 3.3e-08 62.8 121 30.6
BcaNung04756 Brassica carinata HOM05D001177 ORTHO05D001507 4.3e-08 62.4 125 31.2
C01p01720 Brassica napus HOM05D001177 ORTHO05D001507 4.3e-08 62.4 121 30.6
BolC1t00166H Brassica oleracea HOM05D001177 ORTHO05D001507 4.3e-08 62.4 121 30.6
SEGI_13207 Sequoiadendron giganteum HOM05D001177 ORTHO05D001507 1.1e-06 57.8 45 53.3
SEGI_37371 Sequoiadendron giganteum HOM05D001177 ORTHO05D001507 8.9e-06 54.7 84 40.5


User provided reference genes

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