Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.0e-108 396.0 229 100.0
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 5.9e-76 288.1 234 66.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 5.5e-74 281.6 229 66.8
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.1e-73 279.6 236 64.4
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 4.7e-73 278.5 160 82.5
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 6.1e-73 278.1 160 81.9
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 6.1e-73 278.1 235 65.5
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.8e-72 276.6 160 81.2
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 3.0e-72 275.8 227 64.3
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.9e-72 275.4 243 64.6
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 3.9e-72 275.4 159 81.8
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 6.7e-72 274.6 153 88.9
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.1e-71 273.9 243 64.2
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.1e-71 273.9 143 92.3
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.5e-71 273.5 159 82.4
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 2.0e-71 273.1 142 92.3
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 2.6e-71 272.7 160 82.5
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 2.6e-71 272.7 160 82.5
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 3.3e-71 272.3 142 91.5
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.7e-71 271.6 159 80.5
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 7.4e-71 271.2 149 86.6
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 7.4e-71 271.2 144 91.7
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 9.7e-71 270.8 143 90.2
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.3e-70 270.4 155 84.5
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.7e-70 270.0 155 84.5
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.7e-70 270.0 160 81.2
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.7e-70 270.0 165 78.8
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.2e-70 269.6 228 64.5
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 3.7e-70 268.9 157 80.9
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 3.7e-70 268.9 158 82.3
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 4.8e-70 268.5 155 83.9
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 6.3e-70 268.1 167 80.8
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 6.3e-70 268.1 155 85.2
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 8.2e-70 267.7 151 83.4
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 8.2e-70 267.7 230 65.2
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.1e-69 267.3 229 62.9
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.4e-69 266.9 145 86.2
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 1.4e-69 266.9 145 88.3
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.4e-69 266.9 230 62.6
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 1.8e-69 266.5 158 82.9
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.8e-69 266.5 145 88.3
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 1.8e-69 266.5 146 87.0
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 2.4e-69 266.2 161 79.5
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 5.3e-69 265.0 160 80.0
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 7.0e-69 264.6 228 62.3
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.2e-68 263.8 157 79.6
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.2e-68 263.8 157 80.3
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 1.6e-68 263.5 159 80.5
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 3.5e-68 262.3 157 79.0
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 1.0e-67 260.8 142 86.6
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.7e-67 260.0 142 87.3
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.7e-67 260.0 230 63.5
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 2.9e-67 259.2 157 82.2
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 3.8e-67 258.8 154 79.9
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.8e-67 258.8 155 81.3
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 5.0e-67 258.5 154 81.2
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 5.0e-67 258.5 155 83.2
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 5.0e-67 258.5 155 83.2
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 8.5e-67 257.7 144 85.4
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.5e-66 256.9 144 85.4
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.9e-66 256.5 140 87.9
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.5e-66 256.1 158 78.5
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 3.2e-66 255.8 144 84.7
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 4.2e-66 255.4 157 78.3
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 4.2e-66 255.4 224 64.7
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 5.5e-66 255.0 141 85.1
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.2e-65 253.8 153 81.0
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.2e-65 253.8 219 66.2
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.1e-65 253.1 144 83.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 4.7e-65 251.9 221 63.8
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.1e-65 251.5 237 66.7
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.0e-64 250.8 146 82.2
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.3e-64 249.6 144 81.9
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.3e-64 249.6 144 81.9
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 3.0e-64 249.2 144 81.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 3.0e-64 249.2 144 81.9
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 4.0e-64 248.8 136 87.5
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 5.2e-64 248.4 223 62.3
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 8.8e-64 247.7 142 83.8
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 1.2e-63 247.3 143 81.1
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 2.8e-62 242.7 166 69.9
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 2.8e-62 242.7 145 80.7
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 3.7e-62 242.3 136 86.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.3e-62 241.5 134 87.3
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 8.3e-62 241.1 143 81.1
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.4e-61 240.4 232 58.2
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.8e-61 240.0 135 85.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.4e-61 239.6 133 87.2
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 2.4e-61 239.6 155 73.5
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 5.9e-60 235.0 137 82.5
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 5.0e-59 231.9 128 87.5
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.1e-58 230.7 129 87.6
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 4.0e-56 222.2 159 68.6
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 4.0e-56 222.2 159 66.0
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 5.0e-51 205.3 139 70.5
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.4e-45 187.2 97 87.6
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.0e-43 181.0 90 93.3
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 5.2e-40 168.7 130 61.5
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.5e-39 167.2 140 55.0
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 6.4e-38 161.8 135 63.0
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 2.7e-36 156.4 154 58.4
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 7.8e-36 154.8 134 59.0
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.9e-34 150.2 91 81.3
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 2.5e-34 149.8 150 53.3
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 3.3e-34 149.4 74 93.2
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.6e-34 148.7 95 72.6
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 4.7e-33 145.6 93 78.5
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 1.2e-31 141.0 89 74.2
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 1.7e-30 137.1 78 82.1
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 3.7e-30 136.0 84 81.0
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 4.6e-28 129.0 81 79.0
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 9.5e-26 121.3 67 85.1
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.9e-22 109.0 56 92.9


User provided reference genes

Program Settings