Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.0e-75 284.6 139 100.0
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.1e-61 240.0 139 81.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 8.0e-60 233.8 139 79.1
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.0e-59 233.4 139 79.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.3e-59 232.3 139 79.1
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.2e-58 229.9 137 75.2
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 2.0e-58 229.2 140 77.9
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.4e-58 228.4 139 75.5
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 4.4e-58 228.0 136 77.2
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 4.4e-58 228.0 139 76.3
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 9.8e-58 226.9 135 79.3
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 9.8e-58 226.9 137 74.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.3e-57 226.5 139 76.3
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.7e-57 226.1 140 75.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.8e-57 225.3 136 76.5
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.8e-57 225.3 136 76.5
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.8e-57 225.3 136 76.5
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.7e-57 224.9 137 78.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 8.3e-57 223.8 137 77.4
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 8.3e-57 223.8 137 74.5
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.4e-56 223.0 137 76.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.1e-56 221.9 137 78.8
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 4.1e-56 221.5 137 74.5
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 7.0e-56 220.7 135 74.8
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 7.0e-56 220.7 137 75.9
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 9.1e-56 220.3 136 77.9
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 9.1e-56 220.3 137 73.0
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.6e-55 219.5 139 75.5
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.6e-55 219.5 132 78.0
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.0e-55 219.2 137 78.1
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 4.5e-55 218.0 142 72.5
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.0e-54 216.9 139 70.5
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.8e-54 214.9 137 74.5
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 5.0e-54 214.5 139 73.4
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 6.6e-54 214.2 136 73.5
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 8.6e-54 213.8 133 75.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.1e-53 213.4 142 71.1
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.1e-53 213.4 137 72.3
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.5e-53 213.0 139 71.2
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.5e-53 213.0 142 69.0
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 5.6e-53 211.1 137 70.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 5.6e-53 211.1 137 70.1
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 5.6e-53 211.1 141 70.9
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 5.6e-53 211.1 137 71.5
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.2e-52 209.9 137 70.1
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.6e-52 209.5 139 74.1
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.1e-52 209.1 139 73.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.8e-52 208.8 137 73.0
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 6.1e-52 207.6 139 71.9
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 6.1e-52 207.6 136 69.1
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 6.1e-52 207.6 134 68.7
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 8.0e-52 207.2 137 73.0
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 8.0e-52 207.2 139 68.3
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 8.0e-52 207.2 136 69.1
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 8.0e-52 207.2 136 69.1
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 8.0e-52 207.2 136 73.5
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 8.0e-52 207.2 136 69.1
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.0e-51 206.8 137 69.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.0e-51 206.8 137 70.1
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.4e-51 206.5 137 68.6
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.8e-51 206.1 139 67.6
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.3e-51 205.7 119 82.4
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 4.0e-51 204.9 137 68.6
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 4.0e-51 204.9 137 72.3
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 6.8e-51 204.1 119 80.7
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 6.8e-51 204.1 134 67.9
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 6.8e-51 204.1 134 67.9
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 8.9e-51 203.8 137 67.9
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.5e-50 203.0 139 65.5
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 2.0e-50 202.6 134 67.2
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.0e-50 202.6 139 65.5
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 2.0e-50 202.6 139 66.9
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 4.4e-50 201.4 136 66.2
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 4.4e-50 201.4 134 67.2
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 5.7e-50 201.1 133 68.4
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 9.8e-50 200.3 137 70.8
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.3e-49 199.9 139 71.2
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 3.7e-49 198.4 134 67.2
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 3.7e-49 198.4 138 66.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 4.9e-49 198.0 134 64.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 1.1e-48 196.8 137 65.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.1e-48 196.8 136 66.2
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.8e-48 196.1 137 65.7
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.4e-48 195.7 134 65.7
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.4e-48 195.7 138 65.2
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.4e-48 195.7 136 66.9
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.2e-48 195.3 124 75.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 3.2e-48 195.3 124 75.8
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 4.1e-48 194.9 137 65.0
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.6e-47 193.0 124 75.0
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.0e-47 192.6 129 69.0
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.0e-47 192.6 129 69.0
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 3.5e-47 191.8 137 64.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 5.9e-47 191.0 135 65.9
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.0e-46 190.3 137 64.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-46 189.9 137 63.5
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 6.6e-46 187.6 143 64.3
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 6.6e-46 187.6 136 65.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.9e-45 186.0 140 60.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 4.3e-45 184.9 141 63.1
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 4.3e-45 184.9 107 77.6
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 9.5e-45 183.7 137 59.1
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.1e-44 182.6 132 62.9
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 2.1e-44 182.6 125 70.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.8e-44 182.2 117 73.5
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 4.7e-44 181.4 118 72.0
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.0e-43 180.3 118 72.0
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.2e-42 176.8 133 63.9
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.0e-42 176.0 109 72.5
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.6e-42 175.6 139 62.6
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.1e-40 170.2 132 64.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.4e-40 169.9 109 69.7
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.6e-39 166.4 117 65.8
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.0e-39 166.0 137 58.4
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.2e-34 150.2 121 56.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.4e-34 148.7 129 55.8
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 5.8e-34 147.9 121 55.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.1e-32 143.7 117 55.6
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.4e-32 143.3 110 62.7
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.4e-32 142.5 118 55.1
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.1e-32 141.0 96 70.8
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 9.2e-32 140.6 120 54.2
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 1.6e-31 139.8 90 64.4
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.7e-31 139.0 83 77.1
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.7e-30 136.3 93 67.7
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 5.6e-29 131.3 85 65.9
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.2e-28 130.2 87 69.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 6.4e-25 117.9 91 64.8
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.9e-24 116.3 128 44.5
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.0e-14 84.0 88 50.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.9e-13 79.7 53 69.8
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.1e-08 63.9 43 65.1
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 3.9e-06 55.5 43 58.1


User provided reference genes

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