Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018350 Daucus carota HOM05D008657 ORTHO05D010869 9.0e-195 684.5 460 100.0
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 7.0e-46 189.9 438 39.0
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 3.5e-45 187.6 371 43.7
Lj3C333T3 Lonicera japonica HOM05D008657 ORTHO05D010869 7.7e-45 186.4 448 44.9
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 6.5e-44 183.3 435 35.9
Prupe.2G051600 Prunus persica HOM05D008657 ORTHO05D010869 2.7e-42 177.9 332 52.7
Actinidia03250 Actinidia chinensis HOM05D008657 ORTHO05D010869 1.3e-39 169.1 341 48.7
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 2.8e-39 167.9 290 38.6
CANSAT56G3352 Cannabis sativa HOM05D008657 ORTHO05D010869 1.2e-37 162.5 442 42.5
COL.COLO4_28899 Corchorus olitorius HOM05D008657 ORTHO05D010869 1.6e-37 162.2 330 51.2
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 3.5e-37 161.0 376 49.5
FAN06G4111 Fragaria x ananassa HOM05D008657 ORTHO05D010869 3.8e-36 157.5 385 55.3
FvH4_7g04580 Fragaria vesca HOM05D008657 ORTHO05D010869 6.5e-36 156.8 385 55.3
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 6.8e-33 146.7 351 34.2
Gorai.010G208900 Gossypium raimondii HOM05D008657 ORTHO05D010869 2.6e-32 144.8 326 61.0
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 3.4e-32 144.4 349 36.7
Gohir.A06G171100 Gossypium hirsutum HOM05D008657 ORTHO05D010869 3.4e-32 144.4 327 61.5
Cpa.g.sc33.145 Carica papaya HOM05D008657 ORTHO05D010869 7.5e-32 143.3 335 47.5
PGR031G0953 Punica granatum HOM05D008657 ORTHO05D010869 9.8e-32 142.9 443 41.5
Thecc.10G128900 Theobroma cacao HOM05D008657 ORTHO05D010869 2.0e-29 135.2 327 61.5
FAN01G0963 Fragaria x ananassa HOM05D008657 ORTHO05D010869 5.9e-29 133.7 300 62.3
A07p01450 Brassica napus HOM05D008657 ORTHO05D010869 1.9e-27 128.6 308 31.2
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 1.9e-27 128.6 349 33.2
Aa31LG8G16330 Aethionema arabicum HOM05D008657 ORTHO05D010869 4.2e-27 127.5 380 35.8
C07p02910 Brassica napus HOM05D008657 ORTHO05D010869 9.5e-27 126.3 310 31.3
BolC7t40688H Brassica oleracea HOM05D008657 ORTHO05D010869 2.1e-26 125.2 310 31.0
Sed0024339 Sechium edule HOM05D008657 ORTHO05D010869 3.6e-26 124.4 338 25.7
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 1.8e-25 122.1 301 26.2
Lj3A303T33 Lonicera japonica HOM05D008657 ORTHO05D010869 1.8e-25 122.1 264 34.1
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 5.2e-25 120.6 302 25.5
BcaC06g36560 Brassica carinata HOM05D008657 ORTHO05D010869 6.8e-25 120.2 302 31.1
BraA07t27942Z Brassica rapa HOM05D008657 ORTHO05D010869 1.2e-24 119.4 146 37.7
AT2G19280 Arabidopsis thaliana HOM05D008657 ORTHO05D010869 7.5e-24 116.7 143 37.1
FAN03G0499 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.3e-23 115.9 192 33.3
CARHR109740 Cardamine hirsuta HOM05D008657 ORTHO05D010869 2.8e-23 114.8 169 33.7
Hund22231 Selenicereus undatus HOM05D008657 ORTHO05D010869 3.7e-23 114.4 343 38.2
Sc08g0000170 Simmondsia chinensis HOM05D008657 ORTHO05D010869 3.7e-23 114.4 439 28.7
Carub.0003s3351 Capsella rubella HOM05D008657 ORTHO05D010869 4.9e-23 114.0 299 37.5
Sp3g32660 Schrenkiella parvula HOM05D008657 ORTHO05D010869 1.4e-22 112.5 325 36.9
AL3G49010 Arabidopsis lyrata HOM05D008657 ORTHO05D010869 2.0e-21 108.6 338 35.5
Oeu052822.1 Olea europaea HOM05D008657 ORTHO05D010869 2.0e-16 92.0 238 54.6
Gohir.D06G179000 Gossypium hirsutum HOM05D008657 ORTHO05D010869 2.1e-10 72.0 206 73.8
Nn7g37112 Nelumbo nucifera HOM05D008657 ORTHO05D010869 4.7e-10 70.9 56 53.6
Lj3C325T0 Lonicera japonica HOM05D008657 ORTHO05D010869 4.4e-08 64.3 170 33.5
SEGI_39034 Sequoiadendron giganteum HOM05D007675 ORTHO05D009699 3.2e-06 58.2 151 25.8
Eucgr.G03180 Eucalyptus grandis HOM05D008657 ORTHO05D010869 9.2e-06 56.6 41 56.1


User provided reference genes

Program Settings