Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 5.8e-68 260.8 132 100.0
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 1.3e-40 169.9 132 62.1
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 2.3e-40 169.1 125 60.8
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.1e-39 166.8 130 60.0
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.9e-39 166.0 128 60.9
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 4.3e-39 164.9 128 59.4
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 1.3e-38 163.3 128 57.8
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 1.8e-37 159.5 126 58.7
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 2.4e-37 159.1 126 59.5
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 3.1e-37 158.7 123 62.6
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 3.1e-37 158.7 125 60.0
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 4.1e-37 158.3 124 59.7
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 4.1e-37 158.3 125 59.2
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 9.0e-37 157.1 125 60.0
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 1.2e-36 156.8 129 58.9
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.6e-36 155.6 125 58.4
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 3.4e-36 155.2 129 56.6
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 2.9e-35 152.1 128 56.2
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 5.0e-35 151.4 126 54.8
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 6.5e-35 151.0 126 57.9
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 1.9e-34 149.4 125 55.2
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 1.9e-34 149.4 122 58.2
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 2.5e-34 149.1 123 58.5
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 3.2e-34 148.7 129 55.0
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 5.5e-34 147.9 126 54.8
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 7.2e-34 147.5 126 55.6
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 1.6e-33 146.4 122 57.4
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 2.1e-33 146.0 129 53.5
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 2.1e-33 146.0 126 54.8
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 2.7e-33 145.6 126 52.4
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 2.7e-33 145.6 126 53.2
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 4.6e-33 144.8 125 56.0
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 7.9e-33 144.1 123 55.3
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 1.0e-32 143.7 126 54.0
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 1.0e-32 143.7 107 57.9
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 1.3e-32 143.3 126 54.8
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 2.3e-32 142.5 119 52.9
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 3.0e-32 142.1 123 53.7
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 3.0e-32 142.1 119 52.9
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 3.9e-32 141.7 121 54.5
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 8.7e-32 140.6 126 54.0
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 1.5e-31 139.8 117 56.4
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 1.5e-31 139.8 123 50.4
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 2.5e-31 139.0 123 54.5
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 2.5e-31 139.0 126 52.4
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.5e-31 139.0 123 54.5
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 3.3e-31 138.7 126 52.4
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 9.7e-31 137.1 126 51.6
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 1.3e-30 136.7 108 58.3
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 1.3e-30 136.7 123 53.7
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 1.3e-30 136.7 126 52.4
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.7e-30 136.3 123 54.5
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 1.7e-30 136.3 125 53.6
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 2.8e-30 135.6 128 53.1
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 2.8e-30 135.6 113 57.5
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 3.7e-30 135.2 126 51.6
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 4.1e-29 131.7 126 50.8
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 4.1e-29 131.7 126 50.8
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 1.5e-28 129.8 129 49.6
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 2.6e-28 129.0 115 51.3
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 1.7e-27 126.3 125 47.2
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 3.8e-27 125.2 104 54.8
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 3.8e-27 125.2 83 63.9
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 5.0e-27 124.8 116 52.6
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 8.5e-27 124.0 129 45.0
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 4.2e-26 121.7 128 45.3
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 1.2e-25 120.2 87 60.9
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 1.2e-25 120.2 119 44.5
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 1.2e-25 120.2 126 45.2
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 1.6e-25 119.8 124 46.8
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 3.6e-25 118.6 90 57.8
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 4.7e-25 118.2 107 52.3
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 1.1e-23 113.6 95 53.7
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 3.7e-22 108.6 119 44.5
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.4e-21 106.7 133 45.9
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 1.4e-21 106.7 148 41.2
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 4.1e-21 105.1 72 66.7
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 9.1e-21 104.0 103 50.5
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 2.9e-19 99.0 101 43.6
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 2.9e-19 99.0 89 57.3
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 7.2e-18 94.4 115 39.1
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.8e-16 89.7 64 60.9
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 3.0e-16 89.0 129 43.4
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 3.7e-14 82.0 76 51.3
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 7.0e-13 77.8 116 37.9
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.6e-12 76.6 79 48.1
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 2.0e-12 76.3 60 55.0
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 5.5e-10 68.2 70 47.1
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 7.2e-10 67.8 133 37.6
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 1.2e-09 67.0 64 43.8
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 1.4e-08 63.5 90 36.7
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 3.0e-08 62.4 68 45.6
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 2.6e-07 59.3 46 58.7
SEGI_00670 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 3.3e-07 58.9 121 31.4
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.3e-06 57.0 127 33.1
BcaC02g11023 Brassica carinata HOM05D002174 ORTHO05D005941 2.2e-06 56.2 116 26.7
C04p22080 Brassica napus HOM05D002174 ORTHO05D005941 2.2e-06 56.2 116 26.7
BolC4t23731H Brassica oleracea HOM05D002174 ORTHO05D005941 2.2e-06 56.2 116 26.7
BcaB02g10211 Brassica carinata HOM05D002174 ORTHO05D005941 2.8e-06 55.8 116 27.6
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 2.8e-06 55.8 127 38.6
Thhalv10017379m.g Eutrema salsugineum HOM05D002174 ORTHO05D005941 3.7e-06 55.5 116 26.7
Sabra16G0144700 Salix brachista HOM05D002174 ORTHO05D005941 3.7e-06 55.5 116 26.7
A07p19380 Brassica napus HOM05D002174 ORTHO05D005941 4.8e-06 55.1 116 26.7
BraA07t29643Z Brassica rapa HOM05D002174 ORTHO05D005941 4.8e-06 55.1 116 26.7
Cfa009013 Carpinus fangiana HOM05D002174 ORTHO05D005941 4.8e-06 55.1 115 27.8
Carub.0004s0989 Capsella rubella HOM05D002174 ORTHO05D005941 6.3e-06 54.7 116 25.9
THA.LOC104800661 Tarenaya hassleriana HOM05D002174 ORTHO05D005941 8.2e-06 54.3 116 26.7


User provided reference genes

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