Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.3e-73 279.6 144 100.0
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.9e-64 249.2 144 86.1
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 2.5e-64 248.8 143 84.6
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 2.8e-63 245.4 143 84.6
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 8.0e-63 243.8 143 85.3
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 1.0e-62 243.4 143 83.9
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 1.4e-62 243.0 143 84.6
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 1.4e-62 243.0 143 83.9
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.8e-62 242.7 143 85.3
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 2.3e-62 242.3 143 82.5
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 5.2e-62 241.1 143 82.5
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 6.8e-62 240.7 143 83.2
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 8.9e-62 240.4 143 82.5
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 8.9e-62 240.4 142 81.7
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 8.9e-62 240.4 143 83.2
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 8.9e-62 240.4 143 83.2
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 1.5e-61 239.6 143 83.2
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 2.6e-61 238.8 143 83.2
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 4.4e-61 238.0 142 81.0
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 4.4e-61 238.0 143 82.5
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 7.5e-61 237.3 143 80.4
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 9.8e-61 236.9 141 82.3
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 1.7e-60 236.1 143 79.7
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 2.2e-60 235.7 143 83.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 2.8e-60 235.3 143 82.5
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 3.7e-60 235.0 144 81.2
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 3.7e-60 235.0 143 82.5
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.7e-60 235.0 143 79.7
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 4.9e-60 234.6 143 79.7
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 4.9e-60 234.6 142 79.6
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 6.3e-60 234.2 143 79.7
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 6.3e-60 234.2 143 80.4
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 8.3e-60 233.8 143 82.5
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 8.3e-60 233.8 136 82.4
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.4e-59 233.0 138 84.1
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.8e-59 232.6 143 79.7
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 1.8e-59 232.6 141 80.1
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 3.1e-59 231.9 142 85.2
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 4.1e-59 231.5 143 81.8
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 5.4e-59 231.1 143 78.3
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 9.2e-59 230.3 141 80.9
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 9.2e-59 230.3 143 80.4
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 1.2e-58 229.9 143 77.6
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 1.6e-58 229.6 141 82.3
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 2.0e-58 229.2 139 79.9
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 2.7e-58 228.8 143 79.0
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.9e-58 227.6 143 79.0
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.0e-57 226.9 143 78.3
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.0e-57 226.9 139 81.3
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.3e-57 226.5 143 75.5
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.7e-57 226.1 141 78.0
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.7e-57 226.1 151 75.5
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.3e-57 225.7 143 76.9
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 2.3e-57 225.7 131 86.3
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 2.9e-57 225.3 143 77.6
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 8.6e-57 223.8 138 77.5
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 5.6e-56 221.1 140 76.4
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 5.6e-56 221.1 140 76.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 9.5e-56 220.3 143 75.5
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.6e-55 219.5 143 78.3
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 6.1e-55 217.6 144 75.0
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.4e-54 216.5 152 73.7
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.8e-54 216.1 129 83.7
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.8e-54 216.1 144 77.1
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 2.3e-54 215.7 153 71.9
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 5.2e-54 214.5 143 74.8
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.2e-53 213.4 150 72.0
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.5e-53 213.0 143 78.3
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.5e-53 213.0 143 69.9
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 2.9e-52 208.8 144 75.0
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 8.3e-52 207.2 143 74.8
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 3.2e-51 205.3 130 76.2
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 7.0e-51 204.1 190 62.6
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 9.2e-51 203.8 137 71.5
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 3.5e-50 201.8 141 73.8
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 2.3e-49 199.1 144 71.5
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 5.6e-48 194.5 148 70.9
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.8e-47 192.2 140 69.3
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 8.0e-47 190.7 111 84.7
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.8e-46 189.5 143 63.6
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 4.0e-46 188.3 109 83.5
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 5.2e-46 188.0 148 62.8
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 9.2e-43 177.2 114 73.7
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.2e-42 176.8 156 60.9
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 7.8e-42 174.1 123 74.0
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 3.9e-41 171.8 125 68.8
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.2e-39 166.8 137 60.6
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.6e-39 166.4 143 57.3
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.6e-39 166.4 141 61.7
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 2.1e-39 166.0 143 57.3
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 6.2e-39 164.5 143 55.9
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 6.2e-39 164.5 143 57.3
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 8.1e-39 164.1 136 58.1
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.8e-38 162.9 143 56.6
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.8e-38 162.9 143 56.6
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 1.8e-38 162.9 143 55.9
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 3.1e-38 162.2 143 55.9
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 4.0e-38 161.8 143 55.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.0e-38 161.8 143 55.9
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.2e-37 160.2 143 55.9
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 2.0e-37 159.5 116 71.6
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 2.6e-37 159.1 143 54.5
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 4.4e-37 158.3 143 55.2
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 4.4e-37 158.3 143 55.2
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 7.5e-37 157.5 136 56.6
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 1.7e-36 156.4 138 50.7
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 2.7e-34 149.1 110 69.1
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 6.0e-34 147.9 104 72.1
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 6.6e-33 144.4 144 55.6
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 1.1e-30 137.1 139 51.8
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.4e-30 136.7 147 57.1
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 7.1e-27 124.4 81 72.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 6.0e-26 121.3 68 83.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 4.7e-23 111.7 65 81.5
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 4.8e-15 85.1 61 67.2
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 2.4e-14 82.8 75 53.3
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.0e-13 79.7 146 39.0
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 4.5e-13 78.6 112 43.8
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 1.9e-08 63.2 36 83.3
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 2.1e-07 59.7 34 88.2
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 2.1e-07 59.7 34 88.2
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 2.1e-07 59.7 138 31.9


User provided reference genes

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