Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 3.5e-65 251.5 131 100.0
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 9.6e-23 110.5 127 52.0
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 3.9e-16 88.6 123 48.0
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 1.6e-14 83.2 101 50.5
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 2.8e-14 82.4 88 58.0
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 4.8e-14 81.6 75 58.7
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 1.1e-13 80.5 135 43.0
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 1.4e-13 80.1 98 53.1
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 2.4e-13 79.3 53 67.9
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 5.3e-13 78.2 120 44.2
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 1.2e-12 77.0 126 42.9
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 2.6e-12 75.9 108 50.0
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 3.4e-12 75.5 91 50.5
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 4.5e-12 75.1 104 49.0
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 4.5e-12 75.1 95 53.7
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 1.0e-11 73.9 102 45.1
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.0e-11 73.9 83 53.0
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.0e-11 73.9 83 53.0
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 1.7e-11 73.2 85 51.8
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 1.7e-11 73.2 96 47.9
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.2e-11 72.8 96 46.9
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 2.2e-11 72.8 124 40.3
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 2.9e-11 72.4 99 45.5
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 2.9e-11 72.4 98 49.0
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 3.8e-11 72.0 110 46.4
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 5.0e-11 71.6 128 38.3
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 5.0e-11 71.6 74 47.3
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 5.0e-11 71.6 109 47.7
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 6.5e-11 71.2 76 55.3
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 6.5e-11 71.2 141 35.5
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 8.4e-11 70.9 98 43.9
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 8.4e-11 70.9 75 57.3
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 8.4e-11 70.9 113 44.2
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 8.4e-11 70.9 107 43.9
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 1.1e-10 70.5 81 46.9
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.1e-10 70.5 75 56.0
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 1.4e-10 70.1 110 45.5
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 1.9e-10 69.7 86 44.2
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 1.9e-10 69.7 86 44.2
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 1.9e-10 69.7 95 47.4
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 1.9e-10 69.7 86 47.7
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.9e-10 69.7 96 45.8
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 2.5e-10 69.3 72 54.2
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 2.5e-10 69.3 103 40.8
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 2.5e-10 69.3 69 58.0
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 2.5e-10 69.3 110 40.9
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 3.2e-10 68.9 81 45.7
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 3.2e-10 68.9 89 44.9
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 3.2e-10 68.9 106 39.6
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 3.2e-10 68.9 109 41.3
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 3.2e-10 68.9 135 37.0
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 4.2e-10 68.6 81 45.7
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 4.2e-10 68.6 81 45.7
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 4.2e-10 68.6 81 45.7
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.2e-10 68.6 106 40.6
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.2e-10 68.6 112 38.4
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 4.2e-10 68.6 131 40.5
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 4.2e-10 68.6 51 62.7
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 5.5e-10 68.2 73 53.4
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 5.5e-10 68.2 104 45.2
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 7.2e-10 67.8 65 53.8
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 7.2e-10 67.8 90 42.2
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 7.2e-10 67.8 81 45.7
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 7.2e-10 67.8 120 42.5
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 7.2e-10 67.8 123 43.1
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 9.3e-10 67.4 81 44.4
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 9.3e-10 67.4 79 46.8
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 1.2e-09 67.0 121 36.4
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.6e-09 66.6 106 38.7
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 1.6e-09 66.6 87 43.7
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 1.6e-09 66.6 115 38.3
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 2.1e-09 66.2 86 47.7
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 2.1e-09 66.2 81 44.4
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 2.1e-09 66.2 76 47.4
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 2.7e-09 65.9 87 40.2
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 2.7e-09 65.9 77 45.5
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 2.7e-09 65.9 77 45.5
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 2.7e-09 65.9 77 45.5
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.7e-09 65.9 104 44.2
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 3.5e-09 65.5 58 56.9
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 3.5e-09 65.5 60 55.0
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 4.6e-09 65.1 128 39.1
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 4.6e-09 65.1 71 49.3
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 4.6e-09 65.1 84 48.8
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 6.1e-09 64.7 106 38.7
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 6.1e-09 64.7 125 39.2
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 6.1e-09 64.7 84 47.6
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 7.9e-09 64.3 77 51.9
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.0e-08 63.9 90 45.6
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.3e-08 63.5 104 43.3
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 1.8e-08 63.2 81 43.2
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 1.8e-08 63.2 79 51.9
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 1.8e-08 63.2 120 38.3
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 1.8e-08 63.2 53 60.4
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 2.3e-08 62.8 87 37.9
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 2.3e-08 62.8 80 51.2
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 2.3e-08 62.8 129 38.0
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 2.3e-08 62.8 75 50.7
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 3.0e-08 62.4 81 40.7
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.0e-08 62.4 89 44.9
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 3.9e-08 62.0 78 46.2
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 5.1e-08 61.6 91 42.9
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 5.1e-08 61.6 85 43.5
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 6.7e-08 61.2 69 53.6
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 8.7e-08 60.8 80 47.5
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 8.7e-08 60.8 101 39.6
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 1.1e-07 60.5 82 42.7
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 1.5e-07 60.1 81 53.1
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 2.5e-07 59.3 82 41.5
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 2.5e-07 59.3 82 41.5
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 3.3e-07 58.9 67 44.8
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 3.3e-07 58.9 62 51.6
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 3.3e-07 58.9 84 47.6
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 4.3e-07 58.5 96 37.5
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 7.4e-07 57.8 80 40.0
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 9.7e-07 57.4 94 45.7
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 2.8e-06 55.8 61 45.9
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 2.8e-06 55.8 51 52.9
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 3.7e-06 55.5 81 42.0
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 4.8e-06 55.1 73 43.8
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 4.8e-06 55.1 98 35.7


User provided reference genes

Program Settings