Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018269 Daucus carota HOM05D016057 ORTHO05D000525 1.9e-138 495.7 239 100.0
DCAR_018277 Daucus carota HOM05D016057 ORTHO05D000525 1.6e-23 114.0 175 44.0
Actinidia35513 Actinidia chinensis HOM05D000886 ORTHO05D000525 8.7e-14 81.6 205 30.2
arahy.Tifrunner.gnm1.ann1.DS7W66 Arachis hypogaea HOM05D000886 ORTHO05D000525 1.5e-13 80.9 151 32.5
arahy.Tifrunner.gnm1.ann1.R5PY9S Arachis hypogaea HOM05D000886 ORTHO05D000525 1.5e-13 80.9 140 34.3
Oeu038042.1 Olea europaea HOM05D000886 ORTHO05D000525 1.9e-13 80.5 151 35.1
Oeu038044.1 Olea europaea HOM05D000886 ORTHO05D000525 1.9e-13 80.5 151 35.1
Nitab4.5_0001338g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 5.7e-13 79.0 165 31.5
CAN.G1076.28 Capsicum annuum HOM05D000886 ORTHO05D000525 7.4e-13 78.6 152 32.2
Nitab4.5_0004525g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 7.4e-13 78.6 165 30.9
Solyc01g100680.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 7.4e-13 78.6 148 31.1
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 1.6e-12 77.4 138 34.1
PGSC0003DMG400042198 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.6e-12 77.4 152 30.9
Solyc01g100670.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 3.7e-12 76.3 159 32.1
Cfa016274 Carpinus fangiana HOM05D000886 ORTHO05D000525 4.8e-12 75.9 137 34.3
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 4.8e-12 75.9 140 35.7
Nitab4.5_0001338g0080 Nicotiana tabacum HOM05D000886 ORTHO05D000525 6.3e-12 75.5 137 32.8
Peaxi162Scf01061g00003 Petunia axillaris HOM05D000886 ORTHO05D000525 6.3e-12 75.5 137 32.1
PGR083G1689 Punica granatum HOM05D000886 ORTHO05D000525 6.3e-12 75.5 201 28.9
PGR083G2382 Punica granatum HOM05D000886 ORTHO05D000525 6.3e-12 75.5 201 28.9
Sopen01g044180 Solanum pennellii HOM05D000886 ORTHO05D000525 6.3e-12 75.5 152 30.9
Nitab4.5_0000712g0170 Nicotiana tabacum HOM05D000886 ORTHO05D000525 8.2e-12 75.1 176 31.8
TWI18G0454 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 8.2e-12 75.1 138 35.5
arahy.Tifrunner.gnm1.ann1.RM4DFR Arachis hypogaea HOM05D000886 ORTHO05D000525 1.4e-11 74.3 115 38.3
Cfa016272 Carpinus fangiana HOM05D000886 ORTHO05D000525 1.4e-11 74.3 137 36.5
PGR083G1422 Punica granatum HOM05D000886 ORTHO05D000525 1.8e-11 73.9 201 28.4
PGSC0003DMG400006389 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.8e-11 73.9 137 32.8
Nitab4.5_0000712g0220 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.4e-11 73.6 176 31.8
Nitab4.5_0002225g0060 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.4e-11 73.6 175 30.9
Oeu053737.1 Olea europaea HOM05D000886 ORTHO05D000525 4.1e-11 72.8 137 32.1
CAN.G1076.27 Capsicum annuum HOM05D000886 ORTHO05D000525 6.9e-11 72.0 165 29.1
Nitab4.5_0004382g0010 Nicotiana tabacum HOM05D000886 ORTHO05D000525 6.9e-11 72.0 175 30.3
SHI02776 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-11 72.0 159 31.4
SGA_v2.0_scaffold37G14598 Striga asiatica HOM05D000886 ORTHO05D000525 6.9e-11 72.0 137 32.8
CAN.G220.21 Capsicum annuum HOM05D000886 ORTHO05D000525 9.0e-11 71.6 136 33.1
CAN.G708.6 Capsicum annuum HOM05D000886 ORTHO05D000525 1.2e-10 71.2 136 33.1
Lj5P282T58 Lonicera japonica HOM05D000886 ORTHO05D000525 1.2e-10 71.2 143 31.5
EL10Ac4g09474 Beta vulgaris HOM05D000886 ORTHO05D000525 1.5e-10 70.9 136 36.0
Cfa016273 Carpinus fangiana HOM05D000886 ORTHO05D000525 1.5e-10 70.9 138 37.0
Aqoxy7G04062 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.6e-10 70.1 137 33.6
TAR636G3206 Trochodendron aralioides HOM05D000886 ORTHO05D000525 2.6e-10 70.1 137 31.4
CAN.G220.19 Capsicum annuum HOM05D000886 ORTHO05D000525 3.4e-10 69.7 136 33.1
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 3.4e-10 69.7 138 37.0
Lj1g0006752 Lotus japonicus HOM05D000886 ORTHO05D000525 3.4e-10 69.7 220 30.5
Atru.chr5.962 Acer truncatum HOM05D000886 ORTHO05D000525 4.5e-10 69.3 138 34.1
CAN.G220.20 Capsicum annuum HOM05D000886 ORTHO05D000525 4.5e-10 69.3 136 33.1
DCAR_018270 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
DCAR_018271 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
DCAR_018272 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
DCAR_018273 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
DCAR_018274 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
DCAR_018275 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
DCAR_018276 Daucus carota HOM05D016057 ORTHO05D000525 4.5e-10 69.3 83 54.2
PGSC0003DMG400012475 Solanum tuberosum HOM05D000886 ORTHO05D000525 4.5e-10 69.3 137 32.8
PGSC0003DMG400014043 Solanum tuberosum HOM05D000886 ORTHO05D000525 4.5e-10 69.3 138 33.3
COL.COLO4_23199 Corchorus olitorius HOM05D000886 ORTHO05D000525 7.7e-10 68.6 138 33.3
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 7.7e-10 68.6 155 31.6
Thecc.01G317300 Theobroma cacao HOM05D000886 ORTHO05D000525 1.0e-09 68.2 138 34.1
AUR62006734 Chenopodium quinoa HOM05D000886 ORTHO05D000525 1.7e-09 67.4 136 35.3
CAN.G220.15 Capsicum annuum HOM05D000886 ORTHO05D000525 2.2e-09 67.0 139 32.4
Nitab4.5_0004310g0010 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.2e-09 67.0 136 30.9
PGSC0003DMG400037105 Solanum tuberosum HOM05D000886 ORTHO05D000525 2.2e-09 67.0 152 29.6
Haze_07614 Corylus avellana HOM05D000886 ORTHO05D000525 2.9e-09 66.6 133 35.3
Atru.chr5.961 Acer truncatum HOM05D000886 ORTHO05D000525 3.8e-09 66.2 141 33.3
Peaxi162Scf00102g00087 Petunia axillaris HOM05D000886 ORTHO05D000525 5.0e-09 65.9 136 32.4
Duzib133G0981 Durio zibethinus HOM05D000886 ORTHO05D000525 6.5e-09 65.5 135 30.4
Aqoxy2G02678 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.4e-08 64.3 137 29.9
Aqoxy2G02684 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.5e-08 63.5 151 29.8
Gohir.D07G133800 Gossypium hirsutum HOM05D000886 ORTHO05D000525 2.5e-08 63.5 138 29.7
Glyma.12G144600 Glycine max HOM05D000886 ORTHO05D000525 4.2e-08 62.8 137 34.3
Phvul.002G068500 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 4.2e-08 62.8 137 32.1
PGSC0003DMG400012504 Solanum tuberosum HOM05D000886 ORTHO05D000525 5.5e-08 62.4 136 31.6
Ah.15g091230 Amaranthus hybridus HOM05D000886 ORTHO05D000525 7.2e-08 62.0 136 31.6
Nitab4.5_0000312g0010 Nicotiana tabacum HOM05D000886 ORTHO05D000525 9.4e-08 61.6 137 30.7
Solyc08g007350.2 Solanum lycopersicum HOM05D000886 ORTHO05D000525 9.4e-08 61.6 137 31.4
TAR374G1684 Trochodendron aralioides HOM05D000886 ORTHO05D000525 9.4e-08 61.6 137 30.7
Gorai.001G145100 Gossypium raimondii HOM05D000886 ORTHO05D000525 1.2e-07 61.2 138 29.0
Nitab4.5_0014313g0010 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.2e-07 61.2 137 29.9
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 2.1e-07 60.5 144 31.2
Lsat_1_v5_gn_9_55760 Lactuca sativa HOM05D000886 ORTHO05D000525 4.6e-07 59.3 142 28.2
SGA_v2.0_scaffold198G41114 Striga asiatica HOM05D000886 ORTHO05D000525 4.6e-07 59.3 138 28.3
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 4.6e-07 59.3 135 28.9
AUR62018406 Chenopodium quinoa HOM05D000886 ORTHO05D000525 6.1e-07 58.9 136 27.9
Dinv09707 Davidia involucrata HOM05D000886 ORTHO05D000525 6.1e-07 58.9 140 29.3
Eucgr.C04094 Eucalyptus grandis HOM05D000886 ORTHO05D000525 6.1e-07 58.9 138 31.9
Lsat_1_v5_gn_9_55780 Lactuca sativa HOM05D000886 ORTHO05D000525 6.1e-07 58.9 137 27.7
Peaxi162Scf00258g00126 Petunia axillaris HOM05D000886 ORTHO05D000525 6.1e-07 58.9 117 32.5
CDE12G0818 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 7.9e-07 58.5 133 32.3
Dinv03445 Davidia involucrata HOM05D000886 ORTHO05D000525 7.9e-07 58.5 141 28.4
ECA232G0479 Erigeron canadensis HOM05D000886 ORTHO05D000525 7.9e-07 58.5 140 28.6
Peaxi162Scf00357g00083 Petunia axillaris HOM05D000886 ORTHO05D000525 1.0e-06 58.2 133 31.6
Peaxi162Scf00357g00084 Petunia axillaris HOM05D000886 ORTHO05D000525 1.0e-06 58.2 133 31.6
Peaxi162Scf00357g00085 Petunia axillaris HOM05D000886 ORTHO05D000525 1.0e-06 58.2 133 31.6
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.8e-06 57.4 143 28.0
Gohir.A02G055600 Gossypium hirsutum HOM05D000886 ORTHO05D000525 3.9e-06 56.2 135 28.9
Peaxi162Scf00174g00122 Petunia axillaris HOM05D000886 ORTHO05D000525 3.9e-06 56.2 136 30.1
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 5.1e-06 55.8 150 28.7
Peaxi162Scf00357g00086 Petunia axillaris HOM05D000886 ORTHO05D000525 6.7e-06 55.5 137 28.5


User provided reference genes

Program Settings