Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018255 Daucus carota HOM05D004068 ORTHO05D004700 4.2e-141 504.6 242 100.0
Nn3g21863 Nelumbo nucifera HOM05D004068 ORTHO05D004700 8.5e-49 198.0 163 62.0
COL.COLO4_23168 Corchorus olitorius HOM05D004068 ORTHO05D004700 1.9e-48 196.8 160 63.1
Duzib138G0863 Durio zibethinus HOM05D004068 ORTHO05D004700 9.4e-48 194.5 160 62.5
Actinidia21362 Actinidia chinensis HOM05D004068 ORTHO05D004700 1.6e-47 193.7 161 60.9
Actinidia06383 Actinidia chinensis HOM05D004068 ORTHO05D004700 2.1e-47 193.4 169 59.2
Thecc.01G321500 Theobroma cacao HOM05D004068 ORTHO05D004700 2.7e-47 193.0 165 62.4
Gorai.007G119900 Gossypium raimondii HOM05D004068 ORTHO05D004700 4.6e-47 192.2 161 60.9
CiPaw.08G084800 Carya illinoinensis HOM05D004068 ORTHO05D004700 6.1e-47 191.8 121 73.6
Gohir.A11G106800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 6.1e-47 191.8 160 61.9
Haze_05111 Corylus avellana HOM05D004068 ORTHO05D004700 1.0e-46 191.0 119 77.3
Rhsim13G0001400 Rhododendron simsii HOM05D004068 ORTHO05D004700 1.4e-46 190.7 135 69.6
Cfa004871 Carpinus fangiana HOM05D004068 ORTHO05D004700 2.3e-46 189.9 165 62.4
GSVIVG01028194001 Vitis vinifera HOM05D004068 ORTHO05D004700 2.3e-46 189.9 119 73.1
Hma1.2p1_0484F.1_g162840 Hydrangea macrophylla HOM05D004068 ORTHO05D004700 1.5e-45 187.2 96 87.5
Peaxi162Scf00919g00026 Petunia axillaris HOM05D004068 ORTHO05D004700 1.5e-45 187.2 115 75.7
Nitab4.5_0004218g0050 Nicotiana tabacum HOM05D004068 ORTHO05D004700 2.0e-45 186.8 139 66.2
Sopen01g029950 Solanum pennellii HOM05D004068 ORTHO05D004700 2.0e-45 186.8 118 73.7
CSS0008406 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.5e-45 186.4 96 86.5
QL12p034273 Quercus lobata HOM05D004068 ORTHO05D004700 2.5e-45 186.4 119 74.8
RcHm_v2.0_Chr3g0486891 Rosa chinensis HOM05D004068 ORTHO05D004700 2.5e-45 186.4 119 73.1
Glyma.10G009700 Glycine max HOM05D004068 ORTHO05D004700 3.3e-45 186.0 127 70.1
SalBow6G1478 Salvia bowleyana HOM05D004068 ORTHO05D004700 3.3e-45 186.0 96 87.5
Prupe.3G006200 Prunus persica HOM05D004068 ORTHO05D004700 7.4e-45 184.9 96 86.5
MSTRG.18070 Avicennia marina HOM05D004068 ORTHO05D004700 9.7e-45 184.5 96 84.4
Manes.05G011200 Manihot esculenta HOM05D004068 ORTHO05D004700 9.7e-45 184.5 107 82.2
Solyc01g068030.3 Solanum lycopersicum HOM05D004068 ORTHO05D004700 9.7e-45 184.5 167 57.5
PGSC0003DMG400005200 Solanum tuberosum HOM05D004068 ORTHO05D004700 9.7e-45 184.5 118 72.9
Migut.D00035 Erythranthe guttata HOM05D004068 ORTHO05D004700 1.3e-44 184.1 99 82.8
PSO357G0073 Papaver somniferum HOM05D004068 ORTHO05D004700 1.3e-44 184.1 100 86.0
CiPaw.07G122600 Carya illinoinensis HOM05D004068 ORTHO05D004700 1.7e-44 183.7 166 57.8
FAN19G0978 Fragaria x ananassa HOM05D004068 ORTHO05D004700 1.7e-44 183.7 171 55.0
Lalb_Chr06g0167051 Lupinus albus HOM05D004068 ORTHO05D004700 1.7e-44 183.7 158 61.4
FvH4_1g26710 Fragaria vesca HOM05D004068 ORTHO05D004700 2.2e-44 183.3 119 72.3
Eucgr.H00894 Eucalyptus grandis HOM05D004068 ORTHO05D004700 2.8e-44 183.0 97 83.5
FAN23G3049 Fragaria x ananassa HOM05D004068 ORTHO05D004700 2.8e-44 183.0 119 73.1
Atru.chr5.916 Acer truncatum HOM05D004068 ORTHO05D004700 3.7e-44 182.6 166 60.2
PSO170G5617 Papaver somniferum HOM05D004068 ORTHO05D004700 3.7e-44 182.6 100 84.0
FAN26G1054 Fragaria x ananassa HOM05D004068 ORTHO05D004700 4.8e-44 182.2 170 54.7
FAN28G2449 Fragaria x ananassa HOM05D004068 ORTHO05D004700 6.3e-44 181.8 119 71.4
HanXRQChr16g0512461 Helianthus annuus HOM05D004068 ORTHO05D004700 6.3e-44 181.8 91 90.1
MBI19_g32706_MAGBIO Magnolia biondii HOM05D004068 ORTHO05D004700 6.3e-44 181.8 97 82.5
SGA_v2.0_scaffold417G51268 Striga asiatica HOM05D004068 ORTHO05D004700 6.3e-44 181.8 99 79.8
Cpa.g.sc67.88 Carica papaya HOM05D004068 ORTHO05D004700 8.2e-44 181.4 130 69.2
CANSAT54G1466 Cannabis sativa HOM05D004068 ORTHO05D004700 1.4e-43 180.6 134 66.4
Glyma.02G009000 Glycine max HOM05D004068 ORTHO05D004700 1.4e-43 180.6 125 69.6
PGR083G2849 Punica granatum HOM05D004068 ORTHO05D004700 2.4e-43 179.9 128 68.8
TWI14G0788 Tripterygium wilfordii HOM05D004068 ORTHO05D004700 3.1e-43 179.5 165 58.8
TAR636G1362 Trochodendron aralioides HOM05D004068 ORTHO05D004700 3.1e-43 179.5 169 61.5
CAN.G100.22 Capsicum annuum HOM05D004068 ORTHO05D004700 5.3e-43 178.7 162 58.0
Nitab4.5_0000222g0260 Nicotiana tabacum HOM05D004068 ORTHO05D004700 9.1e-43 177.9 98 81.6
Ciclev10022090m.g Citrus clementina HOM05D004068 ORTHO05D004700 1.2e-42 177.6 170 58.8
Medtr1g086340 Medicago truncatula HOM05D004068 ORTHO05D004700 1.2e-42 177.6 170 55.3
Duzib211G0484 Durio zibethinus HOM05D004068 ORTHO05D004700 1.5e-42 177.2 162 59.3
MD17G1279300 Malus domestica HOM05D004068 ORTHO05D004700 1.5e-42 177.2 93 84.9
Solyc01g068020.4 Solanum lycopersicum HOM05D004068 ORTHO05D004700 3.4e-42 176.0 117 70.1
Sopen01g029940 Solanum pennellii HOM05D004068 ORTHO05D004700 3.4e-42 176.0 117 70.1
MELO3C023625.2 Cucumis melo HOM05D004068 ORTHO05D004700 4.5e-42 175.6 98 80.6
MD09G1287000 Malus domestica HOM05D004068 ORTHO05D004700 5.9e-42 175.3 91 85.7
CsaV3_7G030310 Cucumis sativus L. HOM05D004068 ORTHO05D004700 7.7e-42 174.9 161 57.8
Gohir.A07G130200 Gossypium hirsutum HOM05D004068 ORTHO05D004700 7.7e-42 174.9 160 58.8
Sed0027961 Sechium edule HOM05D004068 ORTHO05D004700 7.7e-42 174.9 98 79.6
Sc17g0000200 Simmondsia chinensis HOM05D004068 ORTHO05D004700 7.7e-42 174.9 96 81.2
Potri.002G190300 Populus trichocarpa HOM05D004068 ORTHO05D004700 1.3e-41 174.1 164 56.7
ECA236G4612 Erigeron canadensis HOM05D004068 ORTHO05D004700 2.9e-41 172.9 157 56.7
unitig_90.g27445 Utricularia gibba HOM05D004068 ORTHO05D004700 2.9e-41 172.9 101 79.2
Gorai.001G146300 Gossypium raimondii HOM05D004068 ORTHO05D004700 3.8e-41 172.6 160 58.1
CSS0047755 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 6.5e-41 171.8 148 60.1
Gohir.D11G111800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 6.5e-41 171.8 90 85.6
Lsat_1_v5_gn_8_167400 Lactuca sativa HOM05D004068 ORTHO05D004700 8.5e-41 171.4 84 91.7
Cc01_g21940 Coffea canephora HOM05D004068 ORTHO05D004700 1.1e-40 171.0 95 82.1
Gohir.D07G134600 Gossypium hirsutum HOM05D004068 ORTHO05D004700 1.1e-40 171.0 160 57.5
EL10As5g23587 Beta vulgaris HOM05D004068 ORTHO05D004700 1.9e-40 170.2 173 53.8
AUR62011741 Chenopodium quinoa HOM05D004068 ORTHO05D004700 3.2e-40 169.5 95 80.0
CSS0031477 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 7.2e-40 168.3 148 58.8
TAR633G0425 Trochodendron aralioides HOM05D004068 ORTHO05D004700 7.2e-40 168.3 96 79.2
Aa31LG1G10110 Aethionema arabicum HOM05D004068 ORTHO05D004700 1.2e-39 167.5 96 77.1
AT1G02475 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 1.2e-39 167.5 94 78.7
Thhalv10008722m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 1.2e-39 167.5 96 78.1
HanXRQChr06g0168031 Helianthus annuus HOM05D004068 ORTHO05D004700 1.2e-39 167.5 90 81.1
CARHR001800 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.6e-39 167.2 106 73.6
AL1G11820 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 2.1e-39 166.8 139 61.2
A10p01270 Brassica napus HOM05D004068 ORTHO05D004700 2.1e-39 166.8 100 75.0
PGR083G1259 Punica granatum HOM05D004068 ORTHO05D004700 2.1e-39 166.8 128 64.1
Potri.014G115400 Populus trichocarpa HOM05D004068 ORTHO05D004700 2.7e-39 166.4 121 68.6
C05p01270 Brassica napus HOM05D004068 ORTHO05D004700 6.1e-39 165.2 96 76.0
AUR62024574 Chenopodium quinoa HOM05D004068 ORTHO05D004700 7.9e-39 164.9 121 65.3
BcaB03g15774 Brassica carinata HOM05D004068 ORTHO05D004700 1.0e-38 164.5 96 76.0
Sed0019105 Sechium edule HOM05D004068 ORTHO05D004700 1.0e-38 164.5 93 77.4
Aqoxy2G02578 Aquilegia oxysepala HOM05D004068 ORTHO05D004700 1.4e-38 164.1 86 83.7
Sp1g01550 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.8e-38 163.7 90 78.9
Carub.0001s0155 Capsella rubella HOM05D004068 ORTHO05D004700 2.3e-38 163.3 94 76.6
ATR0693G403 Amborella trichopoda HOM05D004068 ORTHO05D004700 1.1e-37 161.0 131 60.3
THA.LOC104801318 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.5e-37 160.6 143 58.0
HPP92_010032 Vanilla planifolia HOM05D004068 ORTHO05D004700 2.0e-37 160.2 96 71.9
Zm00001eb131060 Zea mays HOM05D004068 ORTHO05D004700 2.6e-37 159.8 104 69.2
Sabra14G0085500 Salix brachista HOM05D004068 ORTHO05D004700 5.7e-37 158.7 142 59.9
Carub.0006s3535 Capsella rubella HOM05D004068 ORTHO05D004700 2.2e-36 156.8 130 59.2
Thhalv10028926m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 2.2e-36 156.8 132 58.3
Thhalv10028927m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 2.2e-36 156.8 132 58.3
AT4G01883 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 8.2e-36 154.8 164 50.0
BcaB01g02105 Brassica carinata HOM05D004068 ORTHO05D004700 1.1e-35 154.5 147 55.1
CDE02G2955 Ceratophyllum demersum HOM05D000037 ORTHO05D001684 1.8e-35 153.7 119 62.2
Sabra02G0165200 Salix brachista HOM05D004068 ORTHO05D004700 1.8e-35 153.7 199 48.7
THA.LOC104801319 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 3.1e-35 152.9 168 48.8
CARHR249850 Cardamine hirsuta HOM05D004068 ORTHO05D004700 7.0e-35 151.8 122 56.6
AL6G51410 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 9.1e-35 151.4 166 48.8
BcaC04g24068 Brassica carinata HOM05D004068 ORTHO05D004700 9.1e-35 151.4 123 57.7
Sp6g01730 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.2e-34 151.0 148 51.4
Lj5g0018153 Lotus japonicus HOM05D004068 ORTHO05D004700 4.5e-34 149.1 111 64.0
Hund09678 Selenicereus undatus HOM05D004068 ORTHO05D004700 7.7e-34 148.3 89 75.3
SEGI_19128 Sequoiadendron giganteum HOM05D004068 ORTHO05D004700 3.8e-33 146.0 90 67.8
Phvul.007G211200 Phaseolus vulgaris HOM05D004068 ORTHO05D004700 5.0e-33 145.6 140 56.4
BolC5t28909H Brassica oleracea HOM05D004068 ORTHO05D004700 1.1e-32 144.4 133 55.6
CAN.G100.23 Capsicum annuum HOM05D004068 ORTHO05D004700 1.1e-32 144.4 81 76.5
C09p01400 Brassica napus HOM05D004068 ORTHO05D004700 1.5e-32 144.1 125 55.2
BraA10t42405Z Brassica rapa HOM05D004068 ORTHO05D004700 1.5e-32 144.1 132 56.1
BolC9t53073H Brassica oleracea HOM05D004068 ORTHO05D004700 7.2e-32 141.7 131 52.7
Ca_10252_v3 Cicer arietinum L. HOM05D004068 ORTHO05D004700 1.6e-31 140.6 164 50.6
Psat6g159440 Pisum sativum HOM05D004068 ORTHO05D004700 2.7e-31 139.8 139 54.7
VMungo0720G2238 Vigna mungo HOM05D004068 ORTHO05D004700 2.7e-31 139.8 122 55.7
arahy.Tifrunner.gnm1.ann1.20WW32 Arachis hypogaea HOM05D004068 ORTHO05D004700 3.0e-30 136.3 82 76.8
arahy.Tifrunner.gnm1.ann1.G5UTBZ Arachis hypogaea HOM05D004068 ORTHO05D004700 3.0e-30 136.3 82 76.8
AT1G02470 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 5.7e-29 132.1 96 58.3
Dinv12104 Davidia involucrata HOM05D004068 ORTHO05D004700 7.5e-29 131.7 64 92.2
AL1G11810 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.7e-28 130.6 96 58.3
BcaC07g42396 Brassica carinata HOM05D004068 ORTHO05D004700 2.2e-28 130.2 83 68.7
Mapoly0066s0015 Marchantia polymorpha HOM05D004068 ORTHO05D004700 2.2e-28 130.2 88 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3301 Anthoceros agrestis HOM05D004068 ORTHO05D004700 1.1e-27 127.9 88 62.5
Carub.0001s0154 Capsella rubella HOM05D004068 ORTHO05D004700 1.1e-27 127.9 157 43.9
CARHR001790 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.1e-27 127.9 132 47.0
Lj1A11T70 Lonicera japonica HOM05D004068 ORTHO05D004700 3.1e-27 126.3 140 50.7
SMO134G0067 Selaginella moellendorffii HOM05D004068 ORTHO05D004700 5.3e-27 125.6 82 64.6
THA.LOC104801317 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.6e-26 124.0 121 50.4
vmacro09333 Vaccinium macrocarpon HOM05D004068 ORTHO05D004700 2.7e-26 123.2 65 84.6
Ah.02g112620 Amaranthus hybridus HOM05D004068 ORTHO05D004700 4.5e-26 122.5 85 68.2
Thhalv10008621m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 4.5e-26 122.5 112 49.1
A09p68650 Brassica napus HOM05D004068 ORTHO05D004700 1.0e-25 121.3 90 53.3
BraA09t42208Z Brassica rapa HOM05D004068 ORTHO05D004700 1.0e-25 121.3 90 53.3
TPR.G3089 Trifolium pratense HOM05D004068 ORTHO05D004700 1.3e-25 120.9 167 44.9
BcaC07g42395 Brassica carinata HOM05D004068 ORTHO05D004700 1.7e-25 120.6 90 53.3
C08p53250 Brassica napus HOM05D004068 ORTHO05D004700 1.7e-25 120.6 90 53.3
BolC8t52840H Brassica oleracea HOM05D004068 ORTHO05D004700 1.7e-25 120.6 90 53.3
Pp3c26_7940 Physcomitrium patens HOM05D004068 ORTHO05D004700 3.8e-25 119.4 88 54.5
Pp3c9_13510 Physcomitrium patens HOM05D004068 ORTHO05D004700 1.1e-24 117.9 88 54.5
A10p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.5e-24 117.5 112 46.4
C05p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.5e-24 117.5 112 46.4
BraA10t42404Z Brassica rapa HOM05D004068 ORTHO05D004700 1.5e-24 117.5 112 46.4
Aa31LG1G10100 Aethionema arabicum HOM05D004068 ORTHO05D004700 1.9e-24 117.1 157 42.0
CBR_g29411 Chara braunii HOM05D004068 ORTHO05D004700 2.5e-24 116.7 88 54.5
Sp1g01540 Schrenkiella parvula HOM05D004068 ORTHO05D004700 4.2e-24 115.9 90 50.0
BraA09t35801Z Brassica rapa HOM05D004068 ORTHO05D004700 1.6e-23 114.0 108 50.0
CAN.G257.121 Capsicum annuum HOM05D004068 ORTHO05D004700 4.4e-21 105.9 89 58.4
Cre14.g616250 Chlamydomonas reinhardtii HOM05D004068 ORTHO05D004700 5.7e-21 105.5 85 51.8
HPP92_015252 Vanilla planifolia HOM05D004068 ORTHO05D004700 2.4e-19 100.1 52 80.8
ClCG09G004770 Citrullus lanatus HOM05D004068 ORTHO05D004700 7.0e-19 98.6 163 39.3
MCO03G258 Micromonas commoda HOM05D004068 ORTHO05D004700 6.5e-17 92.0 88 40.9
Aa31LG5G1470 Aethionema arabicum HOM05D004068 ORTHO05D004700 3.6e-15 86.3 165 37.6
Oeu052569.2 Olea europaea HOM05D004068 ORTHO05D004700 2.3e-14 83.6 92 50.0
PRCOL_00002997 Prasinoderma coloniale HOM05D004068 ORTHO05D004700 1.2e-13 81.3 115 34.8
Glyma.19G225300 Glycine max HOM05D004068 ORTHO05D004700 2.6e-13 80.1 85 50.6
Os01g0328600 Oryza sativa ssp. japonica HOM05D004068 ORTHO05D004700 2.4e-11 73.6 55 61.8
Oeu044746.1 Olea europaea HOM05D004068 ORTHO05D004700 7.0e-11 72.0 51 64.7
BcaC03g18203 Brassica carinata HOM05D004068 ORTHO05D004700 9.2e-11 71.6 77 46.8
A02p42700 Brassica napus HOM05D004068 ORTHO05D004700 1.0e-09 68.2 46 63.0
C02p62690 Brassica napus HOM05D004068 ORTHO05D004700 1.0e-09 68.2 46 63.0
A09p01340 Brassica napus HOM05D004068 ORTHO05D004700 5.0e-09 65.9 95 42.1


User provided reference genes

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