Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 5.6e-145 517.7 281 100.0
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 7.2e-100 367.9 281 75.8
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.7e-99 365.9 280 72.5
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 4.8e-96 355.1 244 77.9
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.4e-94 349.0 287 67.2
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.5e-94 348.6 277 71.1
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 5.9e-94 348.2 276 73.6
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.0e-93 347.4 278 68.7
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.3e-93 347.1 276 69.2
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.2e-93 346.3 281 68.3
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.9e-93 345.9 276 69.2
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 5.0e-93 345.1 277 69.3
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 6.5e-93 344.7 282 70.9
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.4e-92 343.6 287 66.2
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.9e-92 343.2 285 69.8
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.2e-92 342.0 274 68.2
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.2e-92 342.0 286 70.3
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 4.2e-92 342.0 248 73.4
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 7.2e-92 341.3 274 68.2
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 7.2e-92 341.3 278 70.5
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.6e-91 340.1 283 66.8
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.7e-91 338.6 291 68.7
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 4.7e-91 338.6 295 66.8
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 6.1e-91 338.2 247 74.1
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 6.1e-91 338.2 269 68.0
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 7.9e-91 337.8 279 71.3
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.0e-90 337.4 276 67.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.8e-90 336.7 248 75.0
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.3e-90 336.3 275 69.1
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 3.0e-90 335.9 249 74.7
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 3.0e-90 335.9 280 66.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 3.9e-90 335.5 283 66.4
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 6.7e-90 334.7 280 70.0
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.5e-89 333.6 281 67.3
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 2.0e-89 333.2 283 69.6
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 3.3e-89 332.4 289 66.4
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 3.3e-89 332.4 279 64.9
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 7.4e-89 331.3 280 65.4
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 7.4e-89 331.3 279 66.7
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 9.7e-89 330.9 280 68.9
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 9.7e-89 330.9 283 68.2
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.3e-88 330.5 248 70.6
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.7e-88 330.1 287 69.7
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.8e-88 329.3 278 69.1
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 6.3e-88 328.2 276 67.4
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 1.1e-87 327.4 276 65.2
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.8e-87 326.6 283 67.1
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 2.4e-87 326.2 284 67.6
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 2.4e-87 326.2 309 61.2
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 2.4e-87 326.2 280 67.1
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.4e-87 326.2 275 71.3
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 4.1e-87 325.5 282 69.1
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 5.3e-87 325.1 282 68.4
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 7.0e-87 324.7 278 68.0
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 7.0e-87 324.7 278 68.0
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 7.0e-87 324.7 294 61.9
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.2e-86 323.9 322 62.4
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 2.0e-86 323.2 308 61.4
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 2.6e-86 322.8 278 67.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.5e-86 322.4 267 66.7
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 4.5e-86 322.0 300 61.3
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 4.5e-86 322.0 298 62.4
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 7.7e-86 321.2 279 66.3
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 7.7e-86 321.2 301 63.5
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 2.2e-85 319.7 279 67.4
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.1e-84 317.4 277 66.4
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.1e-84 317.4 292 62.7
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.9e-84 316.6 299 59.2
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.5e-84 316.2 274 65.0
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 4.2e-84 315.5 275 66.9
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 5.5e-84 315.1 280 66.4
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 9.4e-84 314.3 284 66.5
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.6e-83 313.5 280 66.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.7e-83 312.8 300 60.0
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 8.0e-83 311.2 300 59.3
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.4e-82 310.5 286 66.8
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 2.3e-82 309.7 245 69.8
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 3.0e-82 309.3 211 76.3
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 6.3e-80 301.6 278 61.5
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.3e-80 301.6 278 61.5
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.4e-79 299.7 260 65.4
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 2.4e-79 299.7 298 58.4
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.3e-79 298.5 275 60.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.2e-78 297.4 276 64.1
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.7e-77 293.5 314 60.8
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 5.0e-77 292.0 276 60.1
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.5e-77 291.6 279 59.5
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.5e-77 291.6 279 59.5
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.1e-76 290.8 178 83.7
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 4.7e-75 285.4 274 61.7
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.0e-75 284.6 304 54.9
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.2e-72 276.6 286 57.3
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.8e-72 276.2 283 58.0
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.1e-71 272.7 282 57.8
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 4.1e-71 272.3 284 57.7
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.2e-70 270.8 171 81.9
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.1e-68 264.2 171 82.5
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.0e-66 257.7 285 55.1
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.4e-66 257.3 255 61.6
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.9e-64 248.8 403 43.4
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.0e-62 243.4 283 54.8
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 6.6e-61 238.4 288 55.9
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 8.6e-53 211.5 198 59.1
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.5e-52 210.7 131 84.7
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.0e-46 190.3 156 68.6
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 5.8e-41 172.2 183 60.7
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 9.9e-41 171.4 132 70.5
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.3e-40 171.0 170 61.8
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.6e-35 154.1 139 64.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 4.1e-31 139.4 77 90.9
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.0e-29 134.8 165 49.7
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.0e-29 133.3 146 54.1
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.8e-26 124.0 121 62.0
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.9e-20 104.0 109 58.7
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.8e-19 100.1 114 57.0
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.4e-18 97.8 105 57.1
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 6.4e-16 89.0 194 35.1
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 2.1e-11 73.9 42 88.1
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.2e-09 68.2 112 47.3
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 1.1e-07 61.6 195 29.7
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 4.2e-07 59.7 71 52.1


User provided reference genes

Program Settings