Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 1.0e-108 396.7 201 100.0
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 7.7e-72 274.2 193 70.5
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 1.1e-70 270.4 193 69.4
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 1.8e-68 263.1 201 65.2
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 5.2e-68 261.5 203 63.5
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 6.8e-68 261.2 204 63.2
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 8.8e-68 260.8 195 65.6
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 9.8e-67 257.3 206 64.6
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 6.3e-66 254.6 200 63.5
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 8.3e-66 254.2 204 64.2
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 8.3e-66 254.2 202 60.9
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.1e-65 253.8 193 63.2
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.1e-65 253.8 195 63.1
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.8e-65 253.1 200 62.5
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 1.8e-65 253.1 201 63.2
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.8e-65 253.1 193 63.2
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 2.4e-65 252.7 199 62.3
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 2.4e-65 252.7 195 62.6
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 9.1e-65 250.8 205 61.5
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 9.1e-65 250.8 203 62.6
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.6e-64 250.0 194 64.4
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.0e-64 249.6 193 63.2
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 3.5e-64 248.8 203 60.1
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 3.5e-64 248.8 202 62.4
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.5e-64 248.8 202 62.4
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 3.5e-64 248.8 196 63.8
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.5e-64 248.4 202 62.4
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 4.5e-64 248.4 188 65.4
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 5.9e-64 248.1 202 62.4
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 7.7e-64 247.7 197 65.0
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 7.7e-64 247.7 197 61.9
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 1.0e-63 247.3 205 61.0
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.0e-63 247.3 202 62.4
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 1.0e-63 247.3 205 63.9
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 1.3e-63 246.9 197 62.4
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 1.3e-63 246.9 201 61.2
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 1.7e-63 246.5 205 62.0
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 1.7e-63 246.5 197 62.4
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.7e-63 246.5 196 62.8
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 2.3e-63 246.1 199 62.3
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 2.3e-63 246.1 200 64.5
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.3e-63 246.1 202 61.4
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 2.9e-63 245.7 202 60.4
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 2.9e-63 245.7 188 64.4
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 2.9e-63 245.7 197 61.9
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 3.8e-63 245.4 205 62.0
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 3.8e-63 245.4 196 62.8
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 5.0e-63 245.0 205 62.0
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 5.0e-63 245.0 194 61.9
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 6.6e-63 244.6 197 62.4
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 6.6e-63 244.6 204 61.8
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 8.6e-63 244.2 203 59.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 8.6e-63 244.2 202 59.4
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 1.1e-62 243.8 195 63.1
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 1.9e-62 243.0 205 60.5
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.9e-62 243.0 201 60.2
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 2.5e-62 242.7 205 61.5
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 2.5e-62 242.7 195 64.6
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 3.3e-62 242.3 197 61.9
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 4.2e-62 241.9 202 60.4
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 7.2e-62 241.1 205 60.5
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 1.2e-61 240.4 199 60.3
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.6e-61 240.0 194 64.4
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.1e-61 239.6 189 63.0
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 2.1e-61 239.6 203 60.6
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 2.8e-61 239.2 194 61.3
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 4.7e-61 238.4 201 59.2
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 6.1e-61 238.0 199 61.3
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.1e-61 238.0 202 61.4
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 8.0e-61 237.7 203 59.1
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 8.0e-61 237.7 200 61.0
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.4e-60 236.9 202 59.9
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.8e-60 236.5 207 59.4
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 2.3e-60 236.1 199 61.8
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 3.0e-60 235.7 204 59.3
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 4.0e-60 235.3 203 58.1
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 5.2e-60 235.0 192 60.9
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 8.9e-60 234.2 192 60.9
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 2.0e-59 233.0 197 59.4
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 2.6e-59 232.6 201 59.2
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 4.4e-59 231.9 208 57.2
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 7.5e-59 231.1 206 58.3
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 9.8e-59 230.7 200 58.5
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.3e-58 230.3 209 58.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 3.1e-57 225.7 196 58.7
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 3.1e-57 225.7 215 54.4
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 1.2e-56 223.8 201 60.2
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 6.6e-55 218.0 214 53.3
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.2e-53 213.8 198 58.1
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.8e-53 212.6 203 56.7
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 4.0e-52 208.8 190 58.9
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 8.9e-52 207.6 202 55.0
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.9e-52 207.6 183 58.5
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 2.9e-50 202.6 179 60.9
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 3.9e-47 192.2 187 53.5
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 2.6e-43 179.5 154 59.1
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 3.7e-42 175.6 198 50.5
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.4e-41 173.7 143 62.2
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.1e-41 172.2 201 47.8
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.6e-40 170.2 147 58.5
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.8e-37 159.5 209 43.5
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 1.4e-33 147.1 170 50.0
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 4.7e-29 132.1 129 55.0
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 1.3e-26 124.0 100 62.0
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 7.6e-19 98.2 134 45.5
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 2.4e-17 93.2 86 57.0
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 1.6e-16 90.5 59 74.6
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 7.8e-16 88.2 104 51.0
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 3.0e-15 86.3 65 63.1
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 1.1e-14 84.3 65 61.5
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.3e-14 82.8 146 36.3
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 6.2e-13 78.6 47 76.6
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.3e-10 70.9 72 51.4
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.7e-10 70.5 73 47.9
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.4e-10 68.2 72 48.6
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.9e-09 67.0 72 48.6
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.9e-09 67.0 72 48.6
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.9e-09 67.0 72 48.6
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.6e-08 63.9 72 47.2
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.7e-08 63.2 72 45.8
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 2.5e-06 56.6 101 38.6


User provided reference genes

Program Settings