Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018161 Daucus carota HOM05D008184 ORTHO05D015632 2.5e-189 665.2 323 100.0
DCAR_031810 Daucus carota HOM05D008184 ORTHO05D015632 1.6e-188 662.5 323 99.7
DCAR_022671 Daucus carota HOM05D008184 ORTHO05D015632 5.1e-142 508.1 323 81.1
DCAR_022747 Daucus carota HOM05D008184 ORTHO05D015632 1.0e-89 334.3 189 85.7
DCAR_027138 Daucus carota HOM05D000021 ORTHO05D015632 3.7e-68 262.7 123 100.0
DCAR_030060 Daucus carota HOM05D014044 ORTHO05D015632 4.7e-55 219.2 281 41.3
DCAR_029290 Daucus carota HOM05D014044 ORTHO05D006349 2.1e-50 203.8 305 37.4
DCAR_017413 Daucus carota HOM05D014044 ORTHO05D006349 3.0e-41 173.3 305 33.8
DCAR_018564 Daucus carota HOM05D014044 ORTHO05D015632 6.6e-41 172.2 195 44.6
DCAR_005456 Daucus carota HOM05D014044 ORTHO05D006349 3.6e-39 166.4 191 42.9
DCAR_018007 Daucus carota HOM05D001292 ORTHO05D006349 7.6e-29 132.1 133 55.6
DCAR_018463 Daucus carota HOM05D002069 ORTHO05D002997 3.8e-28 129.8 235 34.9
DCAR_005126 Daucus carota HOM05D008184 ORTHO05D015632 1.4e-27 127.9 154 48.7
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 5.5e-27 125.9 185 33.0
DCAR_001467 Daucus carota HOM05D002069 ORTHO05D001421 2.7e-26 123.6 185 32.4
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 6.7e-25 119.0 173 32.9
DCAR_001085 Daucus carota HOM05D002069 ORTHO05D001421 2.5e-24 117.1 184 33.2
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 1.6e-23 114.4 219 35.6
DCAR_005230 Daucus carota HOM05D002069 ORTHO05D001421 2.1e-23 114.0 184 35.3
DCAR_030272 Daucus carota HOM05D008184 ORTHO05D001421 6.2e-23 112.5 219 35.2
DCAR_015559 Daucus carota HOM05D002069 ORTHO05D001421 4.0e-22 109.8 185 34.1
DCAR_031481 Daucus carota HOM05D002069 ORTHO05D001421 4.0e-22 109.8 186 33.3
DCAR_030518 Daucus carota HOM05D008184 ORTHO05D002997 2.0e-21 107.5 177 33.3
DCAR_010162 Daucus carota HOM05D002069 ORTHO05D001421 3.4e-21 106.7 249 29.7
DCAR_031539 Daucus carota HOM05D002069 ORTHO05D001421 4.5e-21 106.3 199 32.7
DCAR_023162 Daucus carota HOM05D002069 ORTHO05D001421 1.0e-20 105.1 150 44.0
DCAR_010003 Daucus carota HOM05D014044 ORTHO05D015632 1.7e-20 104.4 126 44.4
DCAR_017193 Daucus carota HOM05D002069 ORTHO05D001421 3.8e-20 103.2 186 31.2
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 3.8e-20 103.2 196 32.1
DCAR_011112 Daucus carota HOM05D008184 ORTHO05D001421 6.5e-20 102.4 184 34.8
DCAR_014911 Daucus carota HOM05D002069 ORTHO05D001421 6.5e-20 102.4 183 33.3
DCAR_029821 Daucus carota HOM05D002069 ORTHO05D001421 6.5e-20 102.4 183 33.3
DCAR_030104 Daucus carota HOM05D014044 ORTHO05D006349 1.4e-19 101.3 111 46.8
DCAR_022866 Daucus carota HOM05D036037 ORTHO05D029193 1.9e-19 100.9 242 28.5
DCAR_028462 Daucus carota HOM05D008184 ORTHO05D015632 3.2e-19 100.1 120 50.0
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 1.2e-18 98.2 183 33.3
DCAR_011489 Daucus carota HOM05D002069 ORTHO05D001421 1.3e-17 94.7 190 29.5
DCAR_017289 Daucus carota HOM05D002069 ORTHO05D001421 3.0e-17 93.6 237 29.5
DCAR_015033 Daucus carota HOM05D002069 ORTHO05D001421 3.9e-17 93.2 234 26.5
DCAR_017847 Daucus carota HOM05D008184 ORTHO05D002997 1.5e-16 91.3 220 29.1
HanXRQChr10g0309881 Helianthus annuus HOM05D002069 ORTHO05D001421 9.7e-16 88.6 233 28.3
DCAR_005112 Daucus carota HOM05D008184 ORTHO05D001421 3.7e-15 86.7 138 36.2
DCAR_005136 Daucus carota HOM05D002069 ORTHO05D001421 8.2e-15 85.5 193 31.1
DCAR_005723 Daucus carota HOM05D002069 ORTHO05D001421 8.2e-15 85.5 193 31.1
DCAR_009831 Daucus carota HOM05D002069 ORTHO05D001421 8.2e-15 85.5 193 31.1
DCAR_031358 Daucus carota HOM05D002069 ORTHO05D001421 8.2e-15 85.5 193 31.1
DCAR_032318 Daucus carota HOM05D002069 ORTHO05D001421 8.2e-15 85.5 193 31.1
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 1.8e-14 84.3 166 27.7
DCAR_018982 Daucus carota HOM05D002069 ORTHO05D001421 9.0e-14 82.0 193 30.6
DCAR_028340 Daucus carota HOM05D002069 ORTHO05D001421 9.0e-14 82.0 154 32.5
DCAR_001468 Daucus carota HOM05D002069 ORTHO05D001421 1.2e-13 81.6 173 28.3
ECA233G2044 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-13 81.6 179 33.0
DCAR_017420 Daucus carota HOM05D036185 ORTHO05D001421 2.0e-13 80.9 167 24.6
SGA_v2.0_scaffold166G38398 Striga asiatica HOM05D002069 ORTHO05D002997 5.9e-13 79.3 196 24.5
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 5.9e-13 79.3 196 25.5
ECA233G0853 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-12 78.6 198 29.8
DCAR_010268 Daucus carota HOM05D002069 ORTHO05D001421 2.2e-12 77.4 157 28.0
DCAR_018055 Daucus carota HOM05D002069 ORTHO05D001421 2.9e-12 77.0 157 27.4
ECA238G0948 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.0e-12 76.3 197 26.9
DCAR_022227 Daucus carota HOM05D008184 ORTHO05D002997 2.5e-11 73.9 100 32.0
ECA246G2312 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.5e-11 73.9 193 28.5
Lsat_1_v5_gn_1_57440 Lactuca sativa HOM05D002069 ORTHO05D001421 3.2e-11 73.6 188 28.2
ECA232G2184 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.5e-11 72.8 240 27.1
Lsat_1_v5_gn_9_40780 Lactuca sativa HOM05D002069 ORTHO05D001421 5.5e-11 72.8 231 22.9
HanXRQChr08g0223541 Helianthus annuus HOM05D002069 ORTHO05D001421 7.2e-11 72.4 192 31.8
SalBow6G0143 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.2e-10 71.6 190 24.2
DCAR_017409 Daucus carota HOM05D002069 ORTHO05D001421 1.6e-10 71.2 176 27.8
HanXRQChr06g0167591 Helianthus annuus HOM05D002069 ORTHO05D001421 2.1e-10 70.9 206 28.6
HanXRQChr14g0445141 Helianthus annuus HOM05D002069 ORTHO05D001421 2.1e-10 70.9 206 28.6
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 2.1e-10 70.9 181 26.0
Lsat_1_v5_gn_2_70441 Lactuca sativa HOM05D002069 ORTHO05D001421 3.6e-10 70.1 185 28.6
DCAR_005123 Daucus carota HOM05D008184 ORTHO05D001421 6.1e-10 69.3 148 31.8
ECA248G2855 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.9e-10 68.9 192 26.0
Lsat_1_v5_gn_2_97661 Lactuca sativa HOM05D002069 ORTHO05D001421 7.9e-10 68.9 188 27.7
Lsat_1_v5_gn_4_49940 Lactuca sativa HOM05D002069 ORTHO05D001421 7.9e-10 68.9 194 28.4
SGA_v2.0_scaffold1002G53783 Striga asiatica HOM05D002069 ORTHO05D002997 1.0e-09 68.6 217 23.0
Lsat_1_v5_gn_2_93340 Lactuca sativa HOM05D002069 ORTHO05D001421 1.4e-09 68.2 179 28.5
Lsat_1_v5_gn_4_27020 Lactuca sativa HOM05D002069 ORTHO05D001421 1.4e-09 68.2 179 27.9
Lsat_1_v5_gn_8_18440 Lactuca sativa HOM05D002069 ORTHO05D001421 1.4e-09 68.2 179 27.9
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 1.4e-09 68.2 179 27.9
DCAR_024122 Daucus carota HOM05D014044 ORTHO05D015632 1.8e-09 67.8 54 53.7
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 1.8e-09 67.8 179 27.9
DCAR_018056 Daucus carota HOM05D002069 ORTHO05D001421 2.3e-09 67.4 94 33.0
ECA233G0561 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.3e-09 67.4 192 25.5
ECA240G0553 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.0e-09 67.0 188 27.7
ECA238G1870 Erigeron canadensis HOM05D000097 ORTHO05D001421 3.9e-09 66.6 187 29.4
Hund23767 Selenicereus undatus HOM05D008769 ORTHO05D010955 3.9e-09 66.6 231 26.4
HanXRQChr14g0427631 Helianthus annuus HOM05D033342 ORTHO05D001421 5.1e-09 66.2 182 29.1
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 5.1e-09 66.2 179 27.4
Hund24478 Selenicereus undatus HOM05D008769 ORTHO05D010955 5.1e-09 66.2 188 28.7
ECA238G2168 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.7e-09 65.9 153 30.1
Lsat_1_v5_gn_5_176780 Lactuca sativa HOM05D005502 ORTHO05D001421 6.7e-09 65.9 220 27.7
Lsat_1_v5_gn_6_18960 Lactuca sativa HOM05D005502 ORTHO05D001421 6.7e-09 65.9 220 27.7
SalBow6G0904 Salvia bowleyana HOM05D008275 ORTHO05D009801 6.7e-09 65.9 189 25.4
DCAR_029899 Daucus carota HOM05D002069 ORTHO05D001421 8.8e-09 65.5 124 34.7
SalBow1G7249 Salvia bowleyana HOM05D008275 ORTHO05D009801 8.8e-09 65.5 182 25.8
SalBow5G1427 Salvia bowleyana HOM05D008275 ORTHO05D009801 8.8e-09 65.5 189 24.3
SalBow5G0931 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.1e-08 65.1 179 25.7
DCAR_005068 Daucus carota HOM05D002069 ORTHO05D001421 1.5e-08 64.7 194 26.3
HanXRQChr06g0185171 Helianthus annuus HOM05D010964 ORTHO05D001421 1.5e-08 64.7 235 26.0
DCAR_029729 Daucus carota HOM05D036185 ORTHO05D001421 1.9e-08 64.3 166 21.1
Ah.13g066370 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.5e-08 63.9 185 28.1
Lsat_1_v5_gn_3_120140 Lactuca sativa HOM05D002069 ORTHO05D001421 3.3e-08 63.5 190 27.9
Hund15040 Selenicereus undatus HOM05D008769 ORTHO05D010955 3.3e-08 63.5 188 28.2
Ah.01g009500 Amaranthus hybridus HOM05D006463 ORTHO05D002997 4.3e-08 63.2 192 25.0
ECA233G0231 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.3e-08 63.2 137 30.7
ECA232G4022 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.7e-08 62.8 188 27.1
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 7.4e-08 62.4 193 25.4
ECA238G0639 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.4e-08 62.4 174 26.4
HanXRQChr02g0033561 Helianthus annuus HOM05D010964 ORTHO05D001421 7.4e-08 62.4 235 25.5
HanXRQChr02g0051561 Helianthus annuus HOM05D010964 ORTHO05D001421 7.4e-08 62.4 235 25.5
Lsat_1_v5_gn_2_129340 Lactuca sativa HOM05D005502 ORTHO05D001421 7.4e-08 62.4 229 26.2
Ah.10g026780 Amaranthus hybridus HOM05D006463 ORTHO05D002997 9.7e-08 62.0 192 24.5
Lsat_1_v5_gn_0_33721 Lactuca sativa HOM05D002069 ORTHO05D001421 9.7e-08 62.0 217 22.1
Ah.05g175700 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.3e-07 61.6 193 25.4
Ah.09g225340 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.3e-07 61.6 193 25.4
DCAR_010992 Daucus carota HOM05D008184 ORTHO05D002997 1.3e-07 61.6 104 37.5
ECA240G3823 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.3e-07 61.6 214 23.8
SalBow8G3441 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.3e-07 61.6 179 25.1
Ah.03g145400 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.7e-07 61.2 193 25.4
Ah.04g160950 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.2e-07 60.8 193 25.4
Ah.15g095990 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.2e-07 60.8 193 25.4
ECA240G1105 Erigeron canadensis HOM05D000122 ORTHO05D001883 2.2e-07 60.8 227 26.4
HanXRQChr13g0409311 Helianthus annuus HOM05D010964 ORTHO05D001421 2.8e-07 60.5 200 25.0
Lsat_1_v5_gn_9_99100 Lactuca sativa HOM05D002069 ORTHO05D001421 3.7e-07 60.1 184 23.4
SGA_v2.0_scaffold41G15763 Striga asiatica HOM05D002069 ORTHO05D002997 3.7e-07 60.1 198 23.2
HanXRQChr16g0517631 Helianthus annuus HOM05D010964 ORTHO05D001421 8.2e-07 58.9 126 31.7
Lsat_1_v5_gn_4_110341 Lactuca sativa HOM05D002069 ORTHO05D001421 8.2e-07 58.9 169 23.7
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 8.2e-07 58.9 180 26.7
DCAR_032370 Daucus carota HOM05D002069 ORTHO05D001421 1.4e-06 58.2 95 34.7
Lsat_1_v5_gn_9_119901 Lactuca sativa HOM05D002069 ORTHO05D001421 1.8e-06 57.8 218 26.1
Lsat_1_v5_gn_4_10720 Lactuca sativa HOM05D002069 ORTHO05D001421 2.4e-06 57.4 100 31.0
HanXRQChr03g0078461 Helianthus annuus HOM05D002069 ORTHO05D001421 5.3e-06 56.2 81 37.0
Lsat_1_v5_gn_1_31560 Lactuca sativa HOM05D005502 ORTHO05D001421 5.3e-06 56.2 188 27.7
Lsat_1_v5_gn_4_66980 Lactuca sativa HOM05D002069 ORTHO05D001421 5.3e-06 56.2 119 27.7
Lsat_1_v5_gn_5_31860 Lactuca sativa HOM05D002069 ORTHO05D001421 5.3e-06 56.2 142 28.2
DCAR_001469 Daucus carota HOM05D002069 ORTHO05D001421 6.9e-06 55.8 50 42.0
HanXRQChr04g0112951 Helianthus annuus HOM05D002069 ORTHO05D001421 6.9e-06 55.8 186 26.3
HanXRQChr11g0351751 Helianthus annuus HOM05D002069 ORTHO05D001421 6.9e-06 55.8 186 26.3
Lsat_1_v5_gn_5_126901 Lactuca sativa HOM05D002069 ORTHO05D001421 9.1e-06 55.5 119 27.7


User provided reference genes

Program Settings