Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018042 Daucus carota HOM05D007120 ORTHO05D008881 2.4e-26 121.3 58 100.0
DCAR_014662 Daucus carota HOM05D007120 ORTHO05D008881 8.3e-19 96.3 58 75.9
Lsat_1_v5_gn_6_11060 Lactuca sativa HOM05D007120 ORTHO05D008881 2.1e-09 65.1 43 62.8
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 4.6e-09 63.9 43 60.5
Aqoxy4G03269 Aquilegia oxysepala HOM05D007120 ORTHO05D008881 7.8e-09 63.2 43 60.5
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 1.3e-08 62.4 43 58.1
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 1.7e-08 62.0 44 54.5
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 1.7e-08 62.0 43 53.5
Dinv34497 Davidia involucrata HOM05D006907 ORTHO05D008598 2.3e-08 61.6 54 46.3
HanXRQChr10g0312991 Helianthus annuus HOM05D007120 ORTHO05D008881 3.9e-08 60.8 40 57.5
A03p22930 Brassica napus HOM05D007120 ORTHO05D008881 6.6e-08 60.1 44 61.4
BolC3t15101H Brassica oleracea HOM05D007120 ORTHO05D008881 6.6e-08 60.1 44 61.4
BraA03t11516Z Brassica rapa HOM05D007120 ORTHO05D008881 6.6e-08 60.1 44 61.4
Atru.chr12.199 Acer truncatum HOM05D007120 ORTHO05D008881 8.6e-08 59.7 41 61.0
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 8.6e-08 59.7 40 62.5
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 8.6e-08 59.7 41 51.2
BcaC02g12732 Brassica carinata HOM05D007120 ORTHO05D008881 1.1e-07 59.3 47 57.4
A05p01890 Brassica napus HOM05D007120 ORTHO05D008881 1.1e-07 59.3 47 57.4
Phvul.009G043000 Phaseolus vulgaris HOM05D007120 ORTHO05D008881 1.1e-07 59.3 41 58.5
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 1.1e-07 59.3 41 53.7
C01p26040 Brassica napus HOM05D007120 ORTHO05D008881 1.5e-07 58.9 47 55.3
C04p02230 Brassica napus HOM05D007120 ORTHO05D008881 1.5e-07 58.9 47 57.4
BolC4t21869H Brassica oleracea HOM05D007120 ORTHO05D008881 1.5e-07 58.9 47 57.4
MSTRG.27254 Avicennia marina HOM05D007120 ORTHO05D008881 1.9e-07 58.5 38 57.9
BcaB01g03516 Brassica carinata HOM05D007120 ORTHO05D008881 1.9e-07 58.5 41 61.0
Cfa011840 Carpinus fangiana HOM05D007120 ORTHO05D008881 1.9e-07 58.5 44 52.3
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.9e-07 58.5 41 53.7
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 1.9e-07 58.5 41 53.7
MD03G1050700 Malus domestica HOM05D007120 ORTHO05D008881 2.5e-07 58.2 48 56.2
C04p68540 Brassica napus HOM05D007120 ORTHO05D008881 3.3e-07 57.8 41 61.0
BolC4t28353H Brassica oleracea HOM05D007120 ORTHO05D008881 3.3e-07 57.8 41 61.0
CAN.G1229.12 Capsicum annuum HOM05D007120 ORTHO05D008881 3.3e-07 57.8 40 52.5
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 3.3e-07 57.8 41 56.1
Sp4g23080 Schrenkiella parvula HOM05D007120 ORTHO05D008881 3.3e-07 57.8 41 61.0
A04p31140 Brassica napus HOM05D007120 ORTHO05D008881 4.3e-07 57.4 41 61.0
BraA04t18569Z Brassica rapa HOM05D007120 ORTHO05D008881 4.3e-07 57.4 41 61.0
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 4.3e-07 57.4 41 51.2
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 4.3e-07 57.4 50 52.0
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 4.3e-07 57.4 50 52.0
Lj1g0003388 Lotus japonicus HOM05D007120 ORTHO05D008881 4.3e-07 57.4 40 60.0
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 4.3e-07 57.4 40 47.5
Migut.F00570 Erythranthe guttata HOM05D007120 ORTHO05D008881 5.6e-07 57.0 44 52.3
FAN11G0923 Fragaria x ananassa HOM05D007120 ORTHO05D008881 5.6e-07 57.0 55 45.5
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 5.6e-07 57.0 43 55.8
C04p16380 Brassica napus HOM05D007120 ORTHO05D008881 7.3e-07 56.6 40 60.0
Thhalv10017507m.g Eutrema salsugineum HOM05D007120 ORTHO05D008881 7.3e-07 56.6 41 56.1
HanXRQChr02g0048061 Helianthus annuus HOM05D007120 ORTHO05D008881 7.3e-07 56.6 40 52.5
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 9.5e-07 56.2 44 47.7
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 1.2e-06 55.8 40 57.5
CANSAT56G4069 Cannabis sativa HOM05D007120 ORTHO05D008881 1.6e-06 55.5 41 53.7
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 1.6e-06 55.5 40 52.5
Os07g0680300 Oryza sativa ssp. japonica HOM05D007120 ORTHO05D008881 1.6e-06 55.5 40 57.5
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 1.6e-06 55.5 40 55.0
Prupe.2G265200 Prunus persica HOM05D007120 ORTHO05D008881 1.6e-06 55.5 37 59.5
Prupe.6G040200 Prunus persica HOM05D007120 ORTHO05D008881 1.6e-06 55.5 51 47.1
C01p18970 Brassica napus HOM05D007120 ORTHO05D008881 2.1e-06 55.1 48 56.2
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 2.1e-06 55.1 40 50.0
Lalb_Chr08g0239241 Lupinus albus HOM05D007120 ORTHO05D008881 2.1e-06 55.1 41 53.7
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 2.1e-06 55.1 40 47.5
Nitab4.5_0000171g0210 Nicotiana tabacum HOM05D007120 ORTHO05D008881 2.8e-06 54.7 40 52.5
Solyc03g095730.4 Solanum lycopersicum HOM05D007120 ORTHO05D008881 2.8e-06 54.7 40 52.5
PGSC0003DMG400020601 Solanum tuberosum HOM05D007120 ORTHO05D008881 2.8e-06 54.7 40 52.5
AL4G38650 Arabidopsis lyrata HOM05D007120 ORTHO05D008881 4.7e-06 53.9 55 47.3
AT2G40765 Arabidopsis thaliana HOM05D007120 ORTHO05D008881 4.7e-06 53.9 55 47.3
FAN21G2234 Fragaria x ananassa HOM05D007120 ORTHO05D008881 4.7e-06 53.9 55 41.8
Hund13439 Selenicereus undatus HOM05D007120 ORTHO05D008881 4.7e-06 53.9 40 47.5
Glyma.04G223400 Glycine max HOM05D007120 ORTHO05D008881 6.2e-06 53.5 41 46.3
Glyma.06G141900 Glycine max HOM05D007120 ORTHO05D008881 6.2e-06 53.5 41 46.3
Lalb_Chr11g0067731 Lupinus albus HOM05D007120 ORTHO05D008881 6.2e-06 53.5 41 51.2
Carub.0004s2306 Capsella rubella HOM05D007120 ORTHO05D008881 8.1e-06 53.1 41 56.1


User provided reference genes

Program Settings