Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.0e-76 288.5 153 100.0
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 5.7e-67 257.7 153 86.3
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.7e-66 256.1 153 83.7
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 6.3e-66 254.2 153 84.3
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.4e-65 252.3 153 85.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 4.1e-65 251.5 153 85.0
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 4.1e-65 251.5 153 85.6
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 9.1e-65 250.4 153 84.3
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 9.1e-65 250.4 153 82.4
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-64 250.0 152 82.2
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.2e-64 250.0 153 83.7
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.2e-64 250.0 153 85.0
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.2e-64 250.0 153 85.0
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 1.6e-64 249.6 153 83.7
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.6e-64 249.6 153 82.4
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 2.0e-64 249.2 153 83.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 2.6e-64 248.8 153 83.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.6e-64 248.8 153 85.0
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.6e-64 248.8 153 85.0
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.6e-64 248.8 153 82.4
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.5e-64 248.4 151 84.1
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-64 248.4 153 84.3
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 4.5e-64 248.1 153 83.7
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 5.9e-64 247.7 153 84.3
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.0e-63 246.9 153 81.0
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.0e-63 246.9 153 83.0
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.0e-63 246.9 153 83.0
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.0e-63 246.9 153 81.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.3e-63 246.5 153 81.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.3e-63 246.5 153 81.0
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.3e-63 246.5 153 83.7
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.3e-63 246.5 153 83.7
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.3e-63 246.5 153 81.7
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.7e-63 246.1 153 81.0
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.2e-63 245.7 153 81.0
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 2.2e-63 245.7 151 82.1
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 82.8
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 2.9e-63 245.4 153 81.0
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 2.9e-63 245.4 153 81.0
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 3.8e-63 245.0 153 81.0
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.8e-63 245.0 153 83.7
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.8e-63 245.0 153 81.0
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.8e-63 245.0 153 81.0
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 5.0e-63 244.6 153 81.0
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 5.0e-63 244.6 153 81.7
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 5.0e-63 244.6 153 80.4
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 6.5e-63 244.2 153 79.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 6.5e-63 244.2 153 79.1
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 6.5e-63 244.2 153 82.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 8.5e-63 243.8 153 81.0
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.1e-62 243.4 153 79.7
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-62 243.0 153 77.8
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.5e-62 243.0 153 77.8
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.5e-62 243.0 153 81.0
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.5e-62 243.0 153 81.0
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.9e-62 242.7 153 83.0
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.5e-62 242.3 153 79.1
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.5e-62 242.3 153 81.7
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 2.5e-62 242.3 151 81.5
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 3.2e-62 241.9 153 80.4
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 4.2e-62 241.5 153 77.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 4.2e-62 241.5 153 77.1
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.2e-62 241.5 153 79.7
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 4.2e-62 241.5 153 81.0
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 7.2e-62 240.7 153 76.5
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 7.2e-62 240.7 153 76.5
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 7.2e-62 240.7 153 80.4
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 9.4e-62 240.4 151 78.8
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 9.4e-62 240.4 153 78.4
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.2e-61 240.0 153 80.4
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.2e-61 240.0 151 81.5
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.6e-61 239.6 153 79.1
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.1e-61 239.2 148 83.1
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.7e-61 238.8 153 77.8
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 3.6e-61 238.4 153 79.1
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 3.6e-61 238.4 153 77.1
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.7e-61 238.0 151 79.5
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.1e-61 237.7 152 77.6
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 8.0e-61 237.3 153 78.4
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.4e-60 236.5 153 78.4
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.4e-60 236.5 148 81.1
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.4e-60 236.5 148 81.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.3e-60 235.7 148 81.1
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 4.0e-60 235.0 153 77.1
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 4.0e-60 235.0 153 77.1
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 4.0e-60 235.0 153 77.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 5.2e-60 234.6 151 78.8
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 6.7e-60 234.2 153 78.4
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 8.8e-60 233.8 153 77.1
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 1.1e-59 233.4 151 76.8
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.5e-59 233.0 153 75.2
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.5e-59 233.0 151 78.1
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.0e-59 232.6 153 76.5
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 4.4e-59 231.5 151 76.2
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 5.7e-59 231.1 150 80.0
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 2.8e-58 228.8 152 77.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.2e-56 223.4 140 80.7
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.2e-56 223.4 150 74.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 4.5e-56 221.5 141 78.0
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.2e-55 219.2 139 79.1
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 8.5e-55 217.2 152 72.4
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.9e-54 216.1 152 72.4
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 7.2e-54 214.2 132 79.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 9.4e-54 213.8 152 72.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.1e-53 211.1 129 82.9
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 8.8e-52 207.2 136 75.0
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 5.7e-51 204.5 153 66.0
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 9.8e-51 203.8 152 69.1
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.8e-50 202.2 131 77.1
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.7e-50 201.8 129 82.9
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 4.8e-50 201.4 140 72.9
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 3.1e-49 198.7 118 85.6
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 5.4e-49 198.0 153 66.7
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.0e-47 193.7 121 81.8
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.7e-47 193.0 120 83.3
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.9e-47 192.2 126 76.2
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.7e-45 185.7 153 64.1
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.0e-44 183.7 107 87.9
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.3e-44 182.6 107 86.9
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 8.8e-44 180.6 152 59.9
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.4e-43 178.7 108 86.1
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 9.8e-43 177.2 131 65.6
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.6e-40 169.9 129 69.8
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 7.5e-35 151.0 91 82.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.7e-29 131.7 123 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.9e-17 93.2 106 53.8
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 4.1e-09 65.5 118 43.2


User provided reference genes

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