Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 4.2e-256 887.5 442 100.0
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 7.8e-117 424.9 492 48.2
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 2.2e-111 406.8 499 45.9
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 6.0e-109 398.7 490 44.3
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 5.6e-107 392.1 499 42.1
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 6.2e-106 388.7 506 45.3
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 4.4e-104 382.5 507 43.2
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 9.9e-104 381.3 501 43.7
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.7e-103 380.6 500 45.4
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.9e-102 377.1 495 42.8
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 2.7e-101 373.2 493 42.6
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 4.6e-101 372.5 493 43.6
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 4.0e-97 359.4 524 40.3
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 1.2e-96 357.8 499 41.3
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 2.6e-96 356.7 484 42.6
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 2.9e-95 353.2 510 40.6
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 8.4e-95 351.7 496 41.5
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 2.4e-94 350.1 543 38.7
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 2.4e-94 350.1 485 40.4
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 1.6e-93 347.4 499 41.9
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.6e-93 347.4 498 38.4
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 2.1e-93 347.1 404 46.5
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 6.0e-93 345.5 496 39.3
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 3.9e-92 342.8 506 39.9
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 6.6e-92 342.0 498 38.4
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 1.8e-89 334.0 495 39.2
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 4.0e-89 332.8 500 40.4
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 6.9e-89 332.0 495 39.0
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 6.9e-89 332.0 500 38.0
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 7.6e-88 328.6 510 38.4
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.7e-87 327.4 501 38.3
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.2e-87 327.0 501 38.1
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 2.2e-87 327.0 622 34.7
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.9e-87 326.6 501 38.5
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 8.4e-87 325.1 535 38.9
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 8.4e-87 325.1 497 39.4
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.4e-86 324.3 496 39.5
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 1.9e-86 323.9 495 38.6
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 4.2e-86 322.8 501 39.9
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 7.1e-86 322.0 498 38.0
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 7.1e-86 322.0 505 38.4
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 9.3e-86 321.6 496 39.7
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 1.6e-85 320.9 495 39.2
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 6.0e-85 318.9 485 39.6
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 1.7e-84 317.4 524 37.8
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 4.3e-83 312.8 490 38.6
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.3e-82 311.2 494 36.4
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 4.8e-82 309.3 546 38.1
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.4e-81 307.8 504 37.9
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 2.9e-79 300.1 498 38.0
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 3.8e-79 299.7 498 36.9
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 8.4e-79 298.5 494 38.9
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 1.1e-78 298.1 499 37.7
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.4e-78 297.7 502 37.3
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 4.2e-78 296.2 540 35.2
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 5.4e-78 295.8 498 37.6
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 1.6e-77 294.3 499 35.5
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.3e-76 290.4 394 40.4
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 6.7e-76 288.9 397 38.8
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 1.1e-70 271.6 489 36.0
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 4.3e-67 259.6 511 33.9
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 3.9e-60 236.5 166 63.9
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 3.3e-59 233.4 398 36.7
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.1e-53 214.2 167 61.7
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 1.1e-51 208.4 492 32.1
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 2.0e-51 207.6 165 59.4
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 2.4e-49 200.7 165 58.8
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 2.2e-47 194.1 177 52.5
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 7.2e-46 189.1 148 62.8
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.4e-41 174.9 162 55.6
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 3.1e-41 173.7 402 30.6
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 7.0e-41 172.6 405 29.6
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 4.4e-35 153.3 127 55.9
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 4.4e-35 153.3 127 55.9
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 5.3e-33 146.4 106 59.4
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 7.0e-33 146.0 137 54.0
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 9.1e-33 145.6 168 46.4
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.6e-32 144.8 175 43.4
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 2.7e-21 107.5 194 36.6
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 2.3e-15 87.8 102 48.0
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 8.6e-15 85.9 107 43.9
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 6.1e-13 79.7 143 35.7
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 2.3e-12 77.8 109 42.2
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 6.8e-12 76.3 114 38.6
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.5e-11 75.1 65 52.3
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 2.6e-11 74.3 109 36.7
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.6e-11 74.3 53 66.0
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 2.6e-11 74.3 144 33.3
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 1.7e-10 71.6 78 41.0
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 2.2e-10 71.2 109 39.4
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.9e-10 70.9 163 29.4
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.7e-10 70.5 45 66.7
Aqoxy7G02843 Aquilegia oxysepala HOM05D000073 ORTHO05D000033 8.6e-07 59.3 106 31.1
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 2.5e-06 57.8 82 41.5


User provided reference genes

Program Settings