Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.6e-138 496.1 250 100.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.6e-103 379.8 249 75.9
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-99 366.7 248 73.4
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.2e-99 365.5 248 73.0
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 3.2e-99 365.5 240 76.2
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 3.5e-98 362.1 242 75.6
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.7e-97 359.8 251 70.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.7e-97 359.8 237 73.8
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.9e-96 356.3 250 71.6
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.3e-96 355.5 237 73.0
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.2e-95 353.6 249 69.1
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.1e-95 352.8 244 70.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.1e-95 350.9 249 71.1
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.4e-94 350.1 238 71.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.4e-94 350.1 243 71.6
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 4.0e-94 348.6 247 71.3
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.2e-93 347.1 238 72.7
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.0e-93 346.3 232 70.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.0e-93 346.3 236 73.7
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.4e-93 345.5 234 73.9
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.4e-93 345.5 234 73.9
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 3.4e-93 345.5 239 70.3
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 5.8e-93 344.7 232 72.8
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 5.8e-93 344.7 238 72.7
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 7.6e-93 344.4 237 69.2
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 2.2e-92 342.8 244 70.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.9e-92 342.4 232 71.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.9e-92 341.7 232 71.6
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 6.4e-92 341.3 238 69.7
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 8.4e-92 340.9 224 75.0
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 8.4e-92 340.9 238 69.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.1e-91 340.5 239 69.5
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.9e-91 339.7 237 69.6
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.4e-91 339.3 220 73.2
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 4.1e-91 338.6 233 70.4
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 5.4e-91 338.2 244 66.4
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.1e-91 337.8 234 73.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.2e-90 337.0 239 69.9
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.5e-90 335.5 240 69.2
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 7.8e-90 334.3 237 69.6
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.0e-89 334.0 239 68.6
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.0e-89 334.0 249 68.7
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.7e-89 333.2 233 67.8
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.7e-89 333.2 233 67.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 6.6e-89 331.3 239 69.5
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 8.6e-89 330.9 233 67.0
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.9e-88 329.7 238 66.4
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.3e-88 328.9 240 68.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 7.3e-88 327.8 229 68.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.2e-87 327.0 242 68.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.6e-87 326.6 243 68.3
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.6e-87 326.6 203 76.8
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.8e-87 325.9 232 67.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 3.6e-87 325.5 232 67.7
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 4.7e-87 325.1 232 67.2
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 4.7e-87 325.1 226 70.8
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 4.7e-87 325.1 237 67.1
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 8.1e-87 324.3 232 66.8
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.1e-86 323.9 235 69.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.4e-86 322.8 242 68.6
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 2.4e-86 322.8 243 68.3
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.1e-86 322.4 239 66.5
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 4.0e-86 322.0 235 68.5
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.5e-85 320.1 235 68.5
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.0e-85 319.7 261 61.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.4e-85 318.9 265 63.0
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 5.8e-85 318.2 232 66.4
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 9.9e-85 317.4 242 65.3
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.3e-84 317.0 237 66.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.3e-84 317.0 241 63.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.7e-84 316.6 232 65.9
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 2.9e-84 315.8 218 69.3
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.9e-84 315.8 218 69.3
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.9e-84 315.8 218 69.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 8.4e-84 314.3 250 64.4
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.9e-83 313.2 233 63.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.7e-82 309.3 208 69.7
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.7e-81 306.6 315 54.3
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.5e-80 303.5 239 64.9
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 4.3e-80 302.0 248 60.5
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.6e-80 301.6 189 76.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 5.6e-80 301.6 291 55.3
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.6e-79 300.1 203 72.4
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.1e-79 299.7 248 60.5
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 4.8e-79 298.5 203 69.5
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 6.4e-76 288.1 221 62.9
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.4e-75 287.0 251 60.6
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 9.3e-75 284.3 221 63.8
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.7e-74 282.7 155 82.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 9.6e-72 274.2 156 80.8
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.3e-71 273.9 154 81.8
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.6e-71 273.5 242 56.6
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 6.2e-71 271.6 155 81.3
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 5.8e-69 265.0 208 61.1
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.4e-67 260.4 240 57.5
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 4.2e-67 258.8 239 54.8
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.7e-66 256.1 201 64.7
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.0e-65 254.2 202 62.4
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.3e-65 253.1 142 80.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 8.7e-65 251.1 233 57.1
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.1e-64 250.8 202 61.4
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 3.2e-59 232.6 177 61.6
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 9.3e-59 231.1 142 75.4
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.7e-58 229.6 204 57.8
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 2.6e-53 213.0 194 60.3
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.2e-47 193.4 163 58.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 6.9e-46 188.3 187 51.3
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.6e-42 177.2 156 55.8
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.6e-42 177.2 156 59.0
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.8e-41 173.7 206 45.6
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 1.4e-38 164.1 194 46.9
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.2e-37 161.0 140 59.3
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.9e-35 153.7 155 52.3
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 6.1e-26 122.1 71 81.7
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-12 77.8 38 81.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 7.2e-11 72.0 55 60.0


User provided reference genes

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