Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 6.8e-75 283.9 140 100.0
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 5.6e-37 157.9 126 70.6
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 5.3e-35 151.4 133 64.7
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 1.3e-33 146.7 133 58.6
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 1.3e-33 146.7 133 61.7
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 1.7e-33 146.4 133 60.9
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 2.2e-33 146.0 133 60.9
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 2.9e-33 145.6 133 60.2
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 2.9e-33 145.6 133 57.9
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 3.8e-33 145.2 133 60.9
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 1.1e-32 143.7 133 59.4
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 1.1e-32 143.7 133 58.6
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 1.1e-32 143.7 133 57.9
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 3.2e-32 142.1 146 55.5
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 3.2e-32 142.1 135 57.0
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 4.2e-32 141.7 133 58.6
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 4.2e-32 141.7 133 57.9
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 7.1e-32 141.0 133 57.9
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 7.1e-32 141.0 133 57.9
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 7.1e-32 141.0 133 57.9
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 9.3e-32 140.6 133 60.2
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 9.3e-32 140.6 133 58.6
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 1.2e-31 140.2 132 59.1
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.2e-31 140.2 133 58.6
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 2.1e-31 139.4 133 57.9
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 4.6e-31 138.3 133 57.1
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 4.6e-31 138.3 140 54.3
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 4.6e-31 138.3 133 57.9
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 4.6e-31 138.3 131 58.8
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 6.0e-31 137.9 133 59.4
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 6.0e-31 137.9 133 57.1
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 7.9e-31 137.5 133 54.9
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 7.9e-31 137.5 133 56.4
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 7.9e-31 137.5 133 56.4
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.0e-30 137.1 140 55.0
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 1.8e-30 136.3 133 56.4
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 3.0e-30 135.6 131 56.5
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 3.9e-30 135.2 129 55.8
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 3.9e-30 135.2 133 55.6
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 3.9e-30 135.2 133 54.9
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 3.9e-30 135.2 133 57.1
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 5.1e-30 134.8 128 57.8
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 8.7e-30 134.0 133 55.6
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 1.1e-29 133.7 133 57.1
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 1.1e-29 133.7 133 54.9
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 1.5e-29 133.3 133 54.1
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 1.9e-29 132.9 133 54.9
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 1.9e-29 132.9 135 54.8
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 1.9e-29 132.9 133 55.6
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 2.5e-29 132.5 131 56.5
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 7.4e-29 131.0 133 54.1
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 7.4e-29 131.0 133 56.4
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 9.6e-29 130.6 133 54.1
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 9.6e-29 130.6 130 54.6
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 1.3e-28 130.2 135 54.1
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 1.3e-28 130.2 133 53.4
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 2.1e-28 129.4 133 54.1
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 2.1e-28 129.4 133 54.9
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 3.6e-28 128.6 133 55.6
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 3.6e-28 128.6 133 53.4
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 3.6e-28 128.6 133 54.9
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 4.8e-28 128.3 133 55.6
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 1.4e-27 126.7 133 52.6
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.4e-27 126.7 132 53.8
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 1.8e-27 126.3 133 51.9
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 2.4e-27 125.9 131 54.2
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 2.4e-27 125.9 131 54.2
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 2.4e-27 125.9 131 54.2
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 2.4e-27 125.9 133 53.4
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 3.1e-27 125.6 133 53.4
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 5.3e-27 124.8 133 51.9
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 5.3e-27 124.8 133 51.9
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 1.5e-26 123.2 133 51.9
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 2.6e-26 122.5 133 51.9
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 5.8e-26 121.3 133 52.6
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 7.6e-26 120.9 142 50.0
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 9.9e-26 120.6 147 47.6
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 1.3e-25 120.2 124 54.0
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 2.2e-25 119.4 144 50.0
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 2.2e-25 119.4 142 50.7
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 2.9e-25 119.0 142 49.3
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 2.9e-25 119.0 142 50.7
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 6.4e-25 117.9 142 48.6
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 1.4e-24 116.7 142 50.0
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 1.4e-24 116.7 133 50.4
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 3.2e-24 115.5 142 47.9
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 3.2e-24 115.5 142 47.9
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 5.5e-24 114.8 142 47.9
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 7.1e-24 114.4 142 47.9
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 9.3e-24 114.0 134 50.0
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 1.2e-23 113.6 133 48.1
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 2.7e-23 112.5 142 47.2
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 3.5e-23 112.1 124 50.8
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 1.8e-22 109.8 133 48.1
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 3.3e-21 105.5 144 41.0
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 9.6e-21 104.0 133 45.1
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 1.6e-20 103.2 141 41.8
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 6.2e-20 101.3 144 40.3
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 8.1e-20 100.9 83 62.7
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 9.0e-19 97.4 95 55.8
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 2.0e-18 96.3 82 62.2
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 2.9e-17 92.4 94 57.4
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 2.5e-16 89.4 121 44.6
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 3.5e-15 85.5 135 37.0
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 6.0e-15 84.7 82 54.9
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 6.0e-15 84.7 133 38.3
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 7.9e-15 84.3 88 52.3
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 6.7e-14 81.3 134 35.8
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 6.7e-14 81.3 134 35.8
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 1.3e-12 77.0 141 39.7
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.6e-12 76.6 109 44.0
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 3.9e-06 55.5 38 65.8
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 6.7e-06 54.7 38 60.5


User provided reference genes

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