Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017872 Daucus carota HOM05D002567 ORTHO05D007435 2.0e-80 302.4 150 100.0
DCAR_012404 Daucus carota HOM05D002567 ORTHO05D007435 9.9e-32 140.6 71 95.8
Phvul.007G165166 Phaseolus vulgaris HOM05D002567 ORTHO05D007435 6.0e-29 131.3 75 80.0
TPR.G33972 Trifolium pratense HOM05D002567 ORTHO05D007435 6.0e-29 131.3 76 78.9
ClCG09G006190 Citrullus lanatus HOM05D002567 ORTHO05D007435 7.9e-29 131.0 76 76.3
Sed0025005 Sechium edule HOM05D002567 ORTHO05D007435 7.9e-29 131.0 76 77.6
Actinidia24843 Actinidia chinensis HOM05D002567 ORTHO05D007435 1.0e-28 130.6 118 63.6
THA.LOC104817512 Tarenaya hassleriana HOM05D002567 ORTHO05D007435 1.3e-28 130.2 74 79.7
Cc01_g20520 Coffea canephora HOM05D002567 ORTHO05D007435 1.8e-28 129.8 76 80.3
SGA_v2.0_scaffold1G00388 Striga asiatica HOM05D002567 ORTHO05D007435 1.8e-28 129.8 75 81.3
FvH4_c6g00110 Fragaria vesca HOM05D002567 ORTHO05D007435 2.3e-28 129.4 75 77.3
FAN24G0883 Fragaria x ananassa HOM05D002567 ORTHO05D007435 2.3e-28 129.4 75 77.3
Psat6g167000 Pisum sativum HOM05D002567 ORTHO05D007435 2.3e-28 129.4 94 68.1
PSO832G0331 Papaver somniferum HOM05D002567 ORTHO05D007435 3.0e-28 129.0 75 80.0
Sp4g29760 Schrenkiella parvula HOM05D002567 ORTHO05D007435 3.0e-28 129.0 74 78.4
TWI14G0999 Tripterygium wilfordii HOM05D002567 ORTHO05D007435 3.0e-28 129.0 75 78.7
FAN20G2691 Fragaria x ananassa HOM05D002567 ORTHO05D007435 5.1e-28 128.3 75 77.3
FvH4_c6g00080 Fragaria vesca HOM05D002567 ORTHO05D007435 6.7e-28 127.9 75 76.0
Os03g0346800 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D007435 6.7e-28 127.9 75 77.3
Migut.D00184 Erythranthe guttata HOM05D002567 ORTHO05D007435 8.7e-28 127.5 75 76.0
Medtr1g088870 Medicago truncatula HOM05D002567 ORTHO05D007435 8.7e-28 127.5 75 76.0
FAN15G3695 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.1e-27 127.1 75 76.0
Lsat_1_v5_gn_5_189341 Lactuca sativa HOM05D002567 ORTHO05D007435 1.1e-27 127.1 73 82.2
SalBow3G3633 Salvia bowleyana HOM05D002567 ORTHO05D007435 1.1e-27 127.1 75 77.3
Manes.05G065800 Manihot esculenta HOM05D002567 ORTHO05D007435 1.5e-27 126.7 76 78.9
Thhalv10001431m.g Eutrema salsugineum HOM05D002567 ORTHO05D007435 2.5e-27 125.9 70 81.4
CiPaw.07G103700 Carya illinoinensis HOM05D002567 ORTHO05D007435 3.3e-27 125.6 73 79.5
Rhsim01G0282400 Rhododendron simsii HOM05D002567 ORTHO05D007435 3.3e-27 125.6 76 78.9
VMungo0720G1827 Vigna mungo HOM05D002567 ORTHO05D007435 4.3e-27 125.2 70 81.4
Glyma.10G020300 Glycine max HOM05D002567 ORTHO05D007435 5.6e-27 124.8 69 84.1
Lj5g0023248 Lotus japonicus HOM05D002567 ORTHO05D007435 5.6e-27 124.8 74 78.4
Sc05g0004310 Simmondsia chinensis HOM05D002567 ORTHO05D007435 5.6e-27 124.8 75 76.0
AL4G47410 Arabidopsis lyrata HOM05D002567 ORTHO05D007435 7.4e-27 124.4 73 75.3
BcaB01g03155 Brassica carinata HOM05D002567 ORTHO05D007435 7.4e-27 124.4 74 75.7
Cpa.g.sc9.190 Carica papaya HOM05D002567 ORTHO05D007435 7.4e-27 124.4 78 74.4
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 7.4e-27 124.4 76 75.0
Aa31LG1G29180 Aethionema arabicum HOM05D002567 ORTHO05D007435 9.6e-27 124.0 69 81.2
A03p26080 Brassica napus HOM05D002567 ORTHO05D007435 9.6e-27 124.0 74 74.3
C03p31100 Brassica napus HOM05D002567 ORTHO05D007435 9.6e-27 124.0 74 74.3
BraA03t11823Z Brassica rapa HOM05D002567 ORTHO05D007435 9.6e-27 124.0 74 74.3
CAN.G1562.6 Capsicum annuum HOM05D002567 ORTHO05D007435 9.6e-27 124.0 76 76.3
Solyc09g074740.2 Solanum lycopersicum HOM05D002567 ORTHO05D007435 9.6e-27 124.0 76 77.6
HanXRQChr01g0001661 Helianthus annuus HOM05D002567 ORTHO05D007435 1.6e-26 123.2 76 76.3
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 1.6e-26 123.2 118 57.6
Aqoxy5G00699 Aquilegia oxysepala HOM05D002567 ORTHO05D007435 2.1e-26 122.9 75 74.7
Lj2C1189T5 Lonicera japonica HOM05D002567 ORTHO05D007435 2.1e-26 122.9 76 73.7
Thecc.01G294000 Theobroma cacao HOM05D002567 ORTHO05D007435 2.1e-26 122.9 75 76.0
BcaC01g05016 Brassica carinata HOM05D002567 ORTHO05D007435 2.8e-26 122.5 74 73.0
BolC3t15458H Brassica oleracea HOM05D002567 ORTHO05D007435 2.8e-26 122.5 74 73.0
CARHR143220 Cardamine hirsuta HOM05D002567 ORTHO05D007435 2.8e-26 122.5 73 74.0
Dinv19731 Davidia involucrata HOM05D002567 ORTHO05D007435 2.8e-26 122.5 76 73.7
Lalb_Chr06g0163361 Lupinus albus HOM05D002567 ORTHO05D007435 2.8e-26 122.5 76 75.0
CsaV3_7G028940 Cucumis sativus L. HOM05D002567 ORTHO05D007435 3.7e-26 122.1 75 76.0
QL12p030562 Quercus lobata HOM05D002567 ORTHO05D007435 3.7e-26 122.1 69 81.2
TAR365G0282 Trochodendron aralioides HOM05D002567 ORTHO05D007435 3.7e-26 122.1 70 81.4
CANSAT25G3369 Cannabis sativa HOM05D002567 ORTHO05D007435 4.8e-26 121.7 75 74.7
HPP92_011840 Vanilla planifolia HOM05D002567 ORTHO05D007435 6.2e-26 121.3 76 76.3
Ciclev10019856m.g Citrus clementina HOM05D002567 ORTHO05D007435 8.2e-26 120.9 75 78.7
Carub.0004s3055 Capsella rubella HOM05D002567 ORTHO05D007435 1.4e-25 120.2 70 78.6
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla HOM05D002567 ORTHO05D007435 1.4e-25 120.2 76 75.0
Nn5g30061 Nelumbo nucifera HOM05D002567 ORTHO05D007435 1.4e-25 120.2 80 72.5
Ca_10357_v3 Cicer arietinum L. HOM05D002567 ORTHO05D007435 1.8e-25 119.8 67 82.1
PGSC0003DMG402011364 Solanum tuberosum HOM05D002567 ORTHO05D007435 1.8e-25 119.8 75 76.0
Sopen09g029600 Solanum pennellii HOM05D002567 ORTHO05D007435 2.4e-25 119.4 75 76.0
AT2G47830 Arabidopsis thaliana HOM05D002567 ORTHO05D007435 3.1e-25 119.0 111 57.7
ECA248G3501 Erigeron canadensis HOM05D002567 ORTHO05D007435 3.1e-25 119.0 75 74.7
Glyma.02G153800 Glycine max HOM05D002567 ORTHO05D007435 3.1e-25 119.0 79 70.9
Duzib133G1128 Durio zibethinus HOM05D002567 ORTHO05D007435 6.9e-25 117.9 68 79.4
Gohir.D08G083800 Gossypium hirsutum HOM05D002567 ORTHO05D007435 9.0e-25 117.5 76 71.1
Gorai.004G088200 Gossypium raimondii HOM05D002567 ORTHO05D007435 9.0e-25 117.5 68 76.5
MD03G1284200 Malus domestica HOM05D002567 ORTHO05D007435 9.0e-25 117.5 75 73.3
CSS0004593 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.2e-24 117.1 76 75.0
CSS0018114 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.2e-24 117.1 76 75.0
Atru.chr5.1231 Acer truncatum HOM05D002567 ORTHO05D007435 1.5e-24 116.7 70 80.0
Cfa005987 Carpinus fangiana HOM05D002567 ORTHO05D007435 2.6e-24 115.9 75 73.3
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 2.6e-24 115.9 75 72.0
FAN19G1365 Fragaria x ananassa HOM05D002567 ORTHO05D007435 2.6e-24 115.9 68 76.5
Gohir.A08G074500 Gossypium hirsutum HOM05D002567 ORTHO05D007435 4.5e-24 115.2 68 75.0
vmacro14988 Vaccinium macrocarpon HOM05D002567 ORTHO05D007435 5.8e-24 114.8 76 75.0
Oeu046707.1 Olea europaea HOM05D002567 ORTHO05D007435 7.6e-24 114.4 118 56.8
PGR044G2614 Punica granatum HOM05D002567 ORTHO05D007435 7.6e-24 114.4 108 60.2
Peaxi162Scf00067g01814 Petunia axillaris HOM05D002567 ORTHO05D007435 1.0e-23 114.0 105 56.2
Eucgr.K03452 Eucalyptus grandis HOM05D002567 ORTHO05D007435 1.3e-23 113.6 65 78.5
RcHm_v2.0_Chr6g0293181 Rosa chinensis HOM05D002567 ORTHO05D007435 2.2e-23 112.8 75 70.7
GSVIVG01010968001 Vitis vinifera HOM05D002567 ORTHO05D007435 2.9e-23 112.5 66 77.3
AUR62043263 Chenopodium quinoa HOM05D002567 ORTHO05D007435 6.5e-23 111.3 77 71.4
Prupe.8G255700 Prunus persica HOM05D002567 ORTHO05D007435 6.5e-23 111.3 78 71.8
AUR62033191 Chenopodium quinoa HOM05D002567 ORTHO05D007435 8.4e-23 110.9 77 70.1
Hund05401 Selenicereus undatus HOM05D002567 ORTHO05D007435 1.1e-22 110.5 81 64.2
ATR0706G146 Amborella trichopoda HOM05D002567 ORTHO05D007435 1.4e-22 110.2 65 78.5
AUR62033190 Chenopodium quinoa HOM05D002567 ORTHO05D007435 1.4e-22 110.2 77 70.1
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 1.4e-22 110.2 65 78.5
Potri.002G209023 Populus trichocarpa HOM05D002567 ORTHO05D007435 2.5e-22 109.4 62 82.3
Sed0015917 Sechium edule HOM05D002567 ORTHO05D007435 1.6e-21 106.7 59 79.7
SMO145G0291 Selaginella moellendorffii HOM05D002567 ORTHO05D007435 4.6e-21 105.1 72 66.7
Ah.15g093860 Amaranthus hybridus HOM05D002567 ORTHO05D007435 6.0e-21 104.8 110 56.4
Mapoly0007s0103 Marchantia polymorpha HOM05D002567 ORTHO05D007435 7.9e-21 104.4 75 62.7
Pp3c10_1060 Physcomitrium patens HOM05D002567 ORTHO05D007435 1.3e-18 97.1 82 57.3
Pp3c14_1830 Physcomitrium patens HOM05D002567 ORTHO05D007435 6.3e-18 94.7 73 61.6
Zm00001eb016640 Zea mays HOM05D002567 ORTHO05D007435 3.1e-17 92.4 50 82.0
DCAR_010031 Daucus carota HOM05D000781 ORTHO05D012367 7.2e-14 81.3 42 97.6
MELO3C016044.2 Cucumis melo HOM05D002567 ORTHO05D007435 4.6e-13 78.6 42 85.7
Nitab4.5_0011064g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.8e-12 76.6 83 50.6
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 5.7e-11 71.6 93 47.3


User provided reference genes

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