Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017851 Daucus carota HOM05D005882 ORTHO05D007387 4.3e-115 417.9 200 100.0
Atru.chr7.1254 Acer truncatum HOM05D005882 ORTHO05D007387 6.7e-84 314.3 244 63.9
Dinv41550 Davidia involucrata HOM05D005882 ORTHO05D007387 2.2e-82 309.3 244 63.5
Hma1.2p1_0018F.1_g012920 Hydrangea macrophylla HOM05D005882 ORTHO05D007387 2.2e-82 309.3 244 62.7
CSS0039949 Camellia sinensis var. sinensis HOM05D005882 ORTHO05D007387 1.1e-81 307.0 244 63.1
Ciclev10008577m.g Citrus clementina HOM05D005882 ORTHO05D007387 5.3e-81 304.7 243 63.0
CiPaw.03G238600 Carya illinoinensis HOM05D005882 ORTHO05D007387 9.1e-81 303.9 244 61.9
Duzib168G0824 Durio zibethinus HOM05D005882 ORTHO05D007387 9.1e-81 303.9 244 60.2
TWI32G0125 Tripterygium wilfordii HOM05D005882 ORTHO05D007387 1.2e-80 303.5 244 63.5
TAR636G3140 Trochodendron aralioides HOM05D001629 ORTHO05D003842 1.5e-80 303.1 244 61.9
GSVIVG01015471001 Vitis vinifera HOM05D005882 ORTHO05D007387 2.0e-80 302.8 244 62.7
Actinidia20308 Actinidia chinensis HOM05D005882 ORTHO05D007387 3.4e-80 302.0 238 62.6
DCAR_017850 Daucus carota HOM05D005882 ORTHO05D007387 3.4e-80 302.0 244 63.5
Manes.06G059700 Manihot esculenta HOM05D005882 ORTHO05D007387 4.5e-80 301.6 244 61.1
arahy.Tifrunner.gnm1.ann1.G1MC5D Arachis hypogaea HOM05D005882 ORTHO05D007387 5.0e-79 298.1 244 59.4
Ah.14g081090 Amaranthus hybridus HOM05D005882 ORTHO05D007387 6.5e-79 297.7 244 59.4
Gohir.D05G020900 Gossypium hirsutum HOM05D005882 ORTHO05D007387 6.5e-79 297.7 244 59.0
Gorai.009G021100 Gossypium raimondii HOM05D005882 ORTHO05D007387 6.5e-79 297.7 244 59.0
arahy.Tifrunner.gnm1.ann1.WI060A Arachis hypogaea HOM05D005882 ORTHO05D007387 1.4e-78 296.6 244 59.0
QL02p087048 Quercus lobata HOM05D005882 ORTHO05D007387 1.4e-78 296.6 243 59.7
Thecc.09G119200 Theobroma cacao HOM05D005882 ORTHO05D007387 1.4e-78 296.6 244 59.4
CANSAT56G3469 Cannabis sativa HOM05D005882 ORTHO05D007387 5.5e-78 294.7 244 59.4
Gohir.A05G019800 Gossypium hirsutum HOM05D005882 ORTHO05D007387 5.5e-78 294.7 244 58.6
Aqoxy7G01989 Aquilegia oxysepala HOM05D005882 ORTHO05D007387 7.2e-78 294.3 243 59.3
ClCG06G010600 Citrullus lanatus HOM05D005882 ORTHO05D007387 1.2e-77 293.5 244 59.4
CsaV3_1G031090 Cucumis sativus L. HOM05D005882 ORTHO05D007387 7.9e-77 290.8 244 58.6
Medtr2g054130 Medicago truncatula HOM05D005882 ORTHO05D007387 2.3e-76 289.3 244 57.4
Cc06_g09080 Coffea canephora HOM05D005882 ORTHO05D007387 3.9e-76 288.5 244 57.8
Lj1g0016893 Lotus japonicus HOM05D005882 ORTHO05D007387 6.7e-76 287.7 243 58.0
Nn2g11903 Nelumbo nucifera HOM05D005882 ORTHO05D007387 1.1e-75 287.0 244 57.8
MSTRG.6078 Avicennia marina HOM05D005882 ORTHO05D007387 3.3e-75 285.4 244 58.6
EL10Ac8g18577 Beta vulgaris HOM05D005882 ORTHO05D007387 3.3e-75 285.4 243 58.0
HanXRQChr10g0316681 Helianthus annuus HOM05D005882 ORTHO05D007387 4.4e-75 285.0 244 59.0
HanXRQChr10g0316701 Helianthus annuus HOM05D005882 ORTHO05D007387 4.4e-75 285.0 244 59.0
Sed0000713 Sechium edule HOM05D005882 ORTHO05D007387 5.7e-75 284.6 244 57.8
Prupe.7G236600 Prunus persica HOM05D005882 ORTHO05D007387 9.7e-75 283.9 244 59.8
vmacro23193 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 9.7e-75 283.9 244 59.0
TPR.G7510 Trifolium pratense HOM05D005882 ORTHO05D007387 1.3e-74 283.5 244 56.1
FvH4_1g04030 Fragaria vesca HOM05D005882 ORTHO05D007387 1.7e-74 283.1 244 57.8
FAN19G1300 Fragaria x ananassa HOM05D005882 ORTHO05D007387 1.7e-74 283.1 244 57.8
Phvul.009G199300 Phaseolus vulgaris HOM05D005882 ORTHO05D007387 1.7e-74 283.1 244 57.0
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 2.2e-74 282.7 244 59.4
MD15G1178700 Malus domestica HOM05D005882 ORTHO05D007387 2.2e-74 282.7 244 59.0
RcHm_v2.0_Chr2g0089501 Rosa chinensis HOM05D005882 ORTHO05D007387 2.2e-74 282.7 244 58.2
VMungo1309G0159 Vigna mungo HOM05D005882 ORTHO05D007387 2.2e-74 282.7 244 57.0
Lalb_Chr08g0234911 Lupinus albus HOM05D005882 ORTHO05D007387 2.8e-74 282.3 244 56.6
Solyc12g006805.1 Solanum lycopersicum HOM05D005882 ORTHO05D007387 3.7e-74 282.0 244 56.6
CAN.G713.5 Capsicum annuum HOM05D005882 ORTHO05D007387 6.3e-74 281.2 244 56.6
Eucgr.C01104 Eucalyptus grandis HOM05D005882 ORTHO05D007387 6.3e-74 281.2 244 57.0
PSO170G5466 Papaver somniferum HOM05D005882 ORTHO05D007387 6.3e-74 281.2 244 56.1
Sopen12g002780 Solanum pennellii HOM05D005882 ORTHO05D007387 6.3e-74 281.2 244 56.1
Potri.018G073501 Populus trichocarpa HOM05D005882 ORTHO05D007387 8.2e-74 280.8 244 57.4
Sc08g0006900 Simmondsia chinensis HOM05D005882 ORTHO05D007387 1.4e-73 280.0 244 56.1
Lj7C636G5 Lonicera japonica HOM05D005882 ORTHO05D003491 1.8e-73 279.6 229 61.6
C07p38700 Brassica napus HOM05D005882 ORTHO05D007387 2.4e-73 279.3 244 55.7
Thhalv10004416m.g Eutrema salsugineum HOM05D005882 ORTHO05D007387 3.1e-73 278.9 244 56.1
PGSC0003DMG400001057 Solanum tuberosum HOM05D005882 ORTHO05D007387 4.1e-73 278.5 244 55.7
AUR62033437 Chenopodium quinoa HOM05D005882 ORTHO05D007387 6.9e-73 277.7 258 54.7
Haze_25642 Corylus avellana HOM05D005882 ORTHO05D007387 9.1e-73 277.3 229 62.0
Sp2g18290 Schrenkiella parvula HOM05D005882 ORTHO05D007387 9.1e-73 277.3 244 55.3
BolC7t44391H Brassica oleracea HOM05D005882 ORTHO05D007387 1.2e-72 276.9 244 55.3
Cfa003320 Carpinus fangiana HOM05D005882 ORTHO05D007387 1.2e-72 276.9 229 61.1
Haze_25647 Corylus avellana HOM05D005882 ORTHO05D007387 1.2e-72 276.9 229 62.0
THA.LOC104811045 Tarenaya hassleriana HOM05D005882 ORTHO05D007387 1.2e-72 276.9 242 56.6
PSO017G1905 Papaver somniferum HOM05D005882 ORTHO05D007387 2.0e-72 276.2 244 54.9
unitig_21.g20470 Utricularia gibba HOM05D005882 ORTHO05D007387 2.0e-72 276.2 243 55.6
Peaxi162Scf00170g00322 Petunia axillaris HOM05D005882 ORTHO05D007387 5.9e-72 274.6 244 58.6
A06p39580 Brassica napus HOM05D005882 ORTHO05D007387 1.0e-71 273.9 244 54.5
HanXRQChr16g0511261 Helianthus annuus HOM05D005882 ORTHO05D007387 1.3e-71 273.5 244 58.2
AT5G20140 Arabidopsis thaliana HOM05D005882 ORTHO05D007387 2.2e-71 272.7 245 54.7
AL6G31690 Arabidopsis lyrata HOM05D005882 ORTHO05D007387 5.0e-71 271.6 246 54.1
Carub.0006s1852 Capsella rubella HOM05D005882 ORTHO05D007387 5.0e-71 271.6 245 54.7
CARHR192690 Cardamine hirsuta HOM05D005882 ORTHO05D007387 5.0e-71 271.6 245 55.1
Migut.J01232 Erythranthe guttata HOM05D005882 ORTHO05D007387 1.1e-70 270.4 243 56.0
Hund00886 Selenicereus undatus HOM05D005882 ORTHO05D007387 2.5e-70 269.2 231 57.1
AUR62011058 Chenopodium quinoa HOM05D005882 ORTHO05D007387 4.2e-70 268.5 229 58.5
Psat1g026560 Pisum sativum HOM05D005882 ORTHO05D007387 1.6e-69 266.5 229 55.5
Aa31LG4G12580 Aethionema arabicum HOM05D005882 ORTHO05D007387 2.1e-69 266.2 240 54.2
MELO3C025286.2 Cucumis melo HOM05D005882 ORTHO05D007387 4.7e-69 265.0 229 57.6
BraA06t26872Z Brassica rapa HOM05D005882 ORTHO05D007387 2.3e-68 262.7 267 49.8
CDE04G0347 Ceratophyllum demersum HOM05D005882 ORTHO05D007387 3.9e-68 261.9 244 53.7
Medtr2g055010 Medicago truncatula HOM05D005882 ORTHO05D007387 3.9e-68 261.9 229 55.9
Rhsim08G0067200 Rhododendron simsii HOM05D005882 ORTHO05D007387 3.9e-68 261.9 234 56.8
Cpa.g.sc75.80 Carica papaya HOM05D005882 ORTHO05D007387 5.2e-68 261.5 236 56.8
QL02p087039 Quercus lobata HOM05D005882 ORTHO05D007387 8.8e-68 260.8 229 58.5
Rhsim08G0067400 Rhododendron simsii HOM05D005882 ORTHO05D007387 1.5e-67 260.0 229 58.1
ClCG06G010680 Citrullus lanatus HOM05D005882 ORTHO05D007387 2.6e-67 259.2 200 59.5
COL.COLO4_34981 Corchorus olitorius HOM05D005882 ORTHO05D007387 3.3e-67 258.8 229 56.8
FAN23G2815 Fragaria x ananassa HOM05D000145 ORTHO05D007387 3.3e-67 258.8 231 56.7
FAN26G2120 Fragaria x ananassa HOM05D000145 ORTHO05D007387 3.3e-67 258.8 231 56.7
Sabra18G0062300 Salix brachista HOM05D005882 ORTHO05D007387 3.7e-66 255.4 251 51.8
FAN28G2467 Fragaria x ananassa HOM05D000145 ORTHO05D007387 4.8e-66 255.0 229 56.3
Ca_28117_v3 Cicer arietinum L. HOM05D005882 ORTHO05D007387 4.1e-65 251.9 229 53.3
SalBow1G1298 Salvia bowleyana HOM05D005882 ORTHO05D007387 5.3e-65 251.5 229 55.0
Os06g0597900 Oryza sativa ssp. japonica HOM05D005882 ORTHO05D007387 9.1e-65 250.8 244 51.6
Zm00001eb385860 Zea mays HOM05D005882 ORTHO05D007387 1.7e-63 246.5 242 52.1
SGA_v2.0_scaffold114G31996 Striga asiatica HOM05D005882 ORTHO05D007387 3.8e-63 245.4 247 51.8
Glyma.06G214700 Glycine max HOM05D005882 ORTHO05D007387 3.2e-62 242.3 244 51.2
ATR0026G035 Amborella trichopoda HOM05D005882 ORTHO05D007387 4.2e-62 241.9 229 53.7
Lsat_1_v5_gn_5_97440 Lactuca sativa HOM05D005882 ORTHO05D007387 9.4e-62 240.7 270 50.0
PGR142G3773 Punica granatum HOM05D005882 ORTHO05D007387 9.4e-62 240.7 244 52.0
Nitab4.5_0003235g0060 Nicotiana tabacum HOM05D005882 ORTHO05D007387 2.8e-58 229.2 244 49.6
CsaV3_1G031110 Cucumis sativus L. HOM05D005882 ORTHO05D007387 2.4e-57 226.1 201 53.2
vmacro23194 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 7.0e-57 224.6 193 59.1
PSO170G6086 Papaver somniferum HOM05D005882 ORTHO05D007387 5.9e-56 221.5 221 50.2
Pp3c4_1490 Physcomitrium patens HOM05D005882 ORTHO05D007387 3.8e-55 218.8 245 45.3
HanXRQChr05g0146761 Helianthus annuus HOM05D005882 ORTHO05D007387 6.5e-55 218.0 205 55.6
Mapoly0088s0023 Marchantia polymorpha HOM05D005882 ORTHO05D007387 2.5e-54 216.1 240 43.8
AagrBONN_evm.TU.Sc2ySwM_344.1814 Anthoceros agrestis HOM05D005882 ORTHO05D007387 7.2e-54 214.5 245 42.9
MELO3C029668.2 Cucumis melo HOM05D005882 ORTHO05D007387 3.0e-52 209.1 189 52.4
HanXRQChr05g0148621 Helianthus annuus HOM05D005882 ORTHO05D007387 3.7e-50 202.2 174 59.8
vmacro20640 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 1.8e-49 199.9 212 51.4
SMO356G0465 Selaginella moellendorffii HOM05D005882 ORTHO05D007387 4.1e-49 198.7 242 43.0
Nitab4.5_0006991g0050 Nicotiana tabacum HOM05D005882 ORTHO05D007387 2.0e-48 196.4 244 45.1
Sed0002298 Sechium edule HOM05D005882 ORTHO05D007387 2.0e-48 196.4 162 57.4
HPP92_002797 Vanilla planifolia HOM05D005882 ORTHO05D007387 1.6e-45 186.8 206 47.1
vmacro20639 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 2.1e-45 186.4 299 38.8
AUR62043908 Chenopodium quinoa HOM05D005882 ORTHO05D007387 5.7e-43 178.3 115 68.7
AUR62044155 Chenopodium quinoa HOM05D005882 ORTHO05D007387 2.4e-41 172.9 218 45.0
vmacro20689 Vaccinium macrocarpon HOM05D005882 ORTHO05D007387 5.9e-40 168.3 196 50.0
Oeu055933.1 Olea europaea HOM05D005882 ORTHO05D007387 1.4e-36 157.1 204 45.6
CBR_g37636 Chara braunii HOM05D005882 ORTHO05D007387 1.6e-32 143.7 259 34.7
Cre06.g304400 Chlamydomonas reinhardtii HOM05D005882 ORTHO05D007387 1.2e-29 134.0 266 35.0
SEGI_03752 Sequoiadendron giganteum HOM05D005882 ORTHO05D007387 1.2e-29 134.0 86 69.8
MCO05G652 Micromonas commoda HOM05D005882 ORTHO05D007387 1.6e-29 133.7 261 35.6
Cre16.g666550 Chlamydomonas reinhardtii HOM05D005882 ORTHO05D007387 1.4e-28 130.6 243 34.2
Nn8g39344 Nelumbo nucifera HOM05D005882 ORTHO05D007387 4.0e-28 129.0 208 42.3
MD00G1026800 Malus domestica HOM05D005882 ORTHO05D007387 2.5e-22 109.8 117 50.4
Oeu058585.1 Olea europaea HOM05D005882 ORTHO05D007387 3.3e-22 109.4 90 58.9
MD00G1025900 Malus domestica HOM05D005882 ORTHO05D007387 3.7e-18 95.9 115 44.3
HanXRQChr03g0064691 Helianthus annuus HOM05D005882 ORTHO05D007387 2.1e-13 80.1 59 67.8


User provided reference genes

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