Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 2.8e-238 828.2 405 100.0
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 8.3e-174 614.0 406 74.4
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 3.5e-172 608.6 406 73.4
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 3.8e-171 605.1 408 72.5
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 6.6e-171 604.4 412 73.3
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.1e-170 603.6 406 72.7
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 1.1e-170 603.6 409 72.9
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.1e-170 603.6 409 72.9
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 1.5e-170 603.2 409 74.1
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 3.3e-170 602.1 406 72.2
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 3.3e-170 602.1 411 72.7
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.1e-169 599.4 409 72.4
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 2.1e-169 599.4 411 72.3
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 3.6e-169 598.6 399 72.9
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 4.7e-169 598.2 409 71.9
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 1.0e-168 597.0 387 74.7
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 1.8e-168 596.3 409 71.4
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 2.3e-168 595.9 405 71.9
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 4.0e-168 595.1 408 72.1
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 6.8e-168 594.3 408 72.1
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 2.0e-167 592.8 407 71.5
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 5.7e-167 591.3 406 70.4
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 9.8e-167 590.5 416 70.7
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 1.3e-166 590.1 416 70.7
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 1.3e-166 590.1 407 71.7
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 2.2e-166 589.3 416 70.7
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.2e-166 589.3 408 70.3
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 2.9e-166 589.0 407 70.8
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 8.3e-166 587.4 411 69.6
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 8.3e-166 587.4 405 70.6
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 8.3e-166 587.4 407 71.7
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 1.8e-165 586.3 409 71.6
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 2.7e-164 582.4 409 70.4
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 4.6e-164 581.6 400 70.5
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 5.9e-164 581.3 420 68.8
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 5.9e-164 581.3 419 69.9
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 2.3e-163 579.3 410 69.3
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 2.3e-163 579.3 411 70.1
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 3.0e-163 578.9 411 68.9
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 6.6e-163 577.8 408 69.6
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 1.5e-162 576.6 403 71.7
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 1.9e-162 576.2 407 68.6
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 1.9e-162 576.2 403 71.5
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 5.6e-162 574.7 409 70.2
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 1.6e-161 573.2 408 68.6
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 2.1e-161 572.8 405 69.9
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 2.8e-161 572.4 409 69.9
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 2.8e-161 572.4 411 69.1
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 6.2e-161 571.2 405 70.4
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 1.1e-160 570.5 400 69.5
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 1.4e-160 570.1 390 72.8
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.8e-160 569.7 406 69.0
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 3.1e-160 568.9 403 69.7
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 3.1e-160 568.9 406 69.5
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 4.0e-160 568.5 407 69.0
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 5.2e-160 568.2 408 69.1
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 5.2e-160 568.2 382 72.5
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 6.8e-160 567.8 409 68.0
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 8.9e-160 567.4 409 70.7
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 1.5e-159 566.6 405 69.4
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 2.0e-159 566.2 408 69.6
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 2.0e-159 566.2 389 71.7
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 3.4e-159 565.5 388 70.4
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 3.4e-159 565.5 407 68.8
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 4.4e-159 565.1 392 69.4
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 7.5e-159 564.3 401 70.6
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 7.5e-159 564.3 391 70.3
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 7.5e-159 564.3 384 72.1
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 9.8e-159 563.9 405 69.1
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 9.8e-159 563.9 408 70.1
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 9.8e-159 563.9 408 70.1
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.3e-158 563.5 409 69.7
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 1.7e-158 563.1 402 70.1
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 1.7e-158 563.1 407 69.8
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 1.1e-157 560.5 405 68.6
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 1.4e-157 560.1 405 68.1
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 1.9e-157 559.7 391 72.6
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 2.4e-157 559.3 386 69.4
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 4.1e-157 558.5 408 68.4
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 4.1e-157 558.5 361 75.1
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 4.1e-157 558.5 388 71.9
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 2.7e-156 555.8 407 67.1
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 1.0e-155 553.9 412 67.5
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 1.0e-155 553.9 385 69.1
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 1.0e-155 553.9 405 70.1
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 8.6e-155 550.8 408 67.4
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 1.1e-154 550.4 390 69.7
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 1.5e-154 550.1 408 68.9
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 5.6e-154 548.1 409 67.5
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 5.6e-154 548.1 388 70.1
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 7.3e-154 547.7 386 70.7
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 7.3e-154 547.7 390 69.5
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 7.3e-154 547.7 386 70.7
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 1.2e-153 547.0 392 68.9
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 1.2e-153 547.0 389 67.9
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 2.1e-153 546.2 404 66.6
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 1.1e-152 543.9 410 67.6
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 5.2e-152 541.6 347 76.7
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 4.4e-151 538.5 385 68.8
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 9.9e-151 537.3 385 68.8
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 4.9e-150 535.0 405 66.7
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 9.2e-149 530.8 407 65.6
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 2.1e-148 529.6 459 61.9
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 2.5e-146 522.7 328 75.9
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 9.5e-146 520.8 309 80.6
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 4.7e-145 518.5 407 62.9
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.1e-144 517.3 407 63.6
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.8e-144 516.5 404 63.4
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 2.4e-144 516.2 409 63.8
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.5e-143 513.5 402 63.9
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 9.9e-143 510.8 406 64.3
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 1.7e-142 510.0 419 61.3
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 6.4e-142 508.1 384 64.3
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 7.1e-141 504.6 384 64.1
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 2.1e-140 503.1 385 64.7
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 2.3e-139 499.6 397 64.0
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 3.0e-139 499.2 384 63.0
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 3.0e-139 499.2 417 63.1
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 2.5e-138 496.1 387 65.4
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 4.3e-138 495.4 386 63.0
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 5.6e-138 495.0 427 62.1
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 8.1e-137 491.1 387 63.0
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 6.9e-136 488.0 387 63.3
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 2.6e-135 486.1 387 63.3
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 9.3e-133 477.6 383 61.6
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 6.6e-131 471.5 309 72.8
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 9.9e-127 457.6 263 83.7
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.0e-123 447.6 386 59.8
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 1.5e-119 433.7 387 56.6
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 3.4e-111 406.0 279 69.5
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.1e-109 401.0 252 76.2
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.1e-109 401.0 248 77.0
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 6.3e-97 358.6 363 51.2
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 6.9e-96 355.1 283 63.3
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.9e-93 347.1 273 59.7
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 2.5e-93 346.7 422 46.2
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 2.1e-92 343.6 282 59.9
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 3.3e-90 336.3 234 72.6
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 6.3e-89 332.0 392 46.4
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 1.5e-87 327.4 255 61.2
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.7e-78 297.4 173 83.2
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 4.7e-76 289.3 197 74.6
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 9.1e-64 248.4 176 67.6
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 6.1e-60 235.7 291 44.0
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 3.6e-52 209.9 203 55.2
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 6.0e-47 192.6 165 58.2
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.6e-46 189.1 166 57.2
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 2.1e-44 184.1 146 63.0
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 4.7e-44 183.0 235 42.6
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 5.8e-42 176.0 118 75.4
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 7.5e-42 175.6 162 54.9
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 4.7e-36 156.4 261 40.6
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 3.1e-35 153.7 82 86.6
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 9.2e-32 142.1 296 34.1
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 7.8e-31 139.0 248 33.5
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 5.6e-29 132.9 238 35.7
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 2.1e-28 131.0 253 35.6
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 2.0e-26 124.4 74 77.0
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 2.0e-26 124.4 382 28.3
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 5.4e-24 116.3 68 76.5
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.6e-23 114.8 68 75.0
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.7e-23 114.0 68 75.0
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 1.0e-22 112.1 241 37.8
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 9.6e-21 105.5 188 36.2
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 4.4e-18 96.7 146 36.3
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 4.2e-16 90.1 146 37.7
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 1.5e-13 81.6 171 32.7
Psat3g000160 Pisum sativum HOM05D004174 ORTHO05D004624 1.5e-13 81.6 114 38.6
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 5.8e-10 69.7 67 46.3
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 2.2e-09 67.8 119 38.7
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.9e-09 67.4 38 76.3


User provided reference genes

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