Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 3.6e-205 718.0 361 100.0
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.4e-132 476.9 359 70.8
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.6e-131 473.4 357 69.5
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 2.0e-131 473.0 361 69.0
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.8e-127 459.9 360 67.2
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 7.5e-126 454.5 362 66.0
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 9.8e-126 454.1 361 65.9
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 4.9e-125 451.8 361 67.3
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.4e-124 450.3 360 64.2
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.8e-124 449.9 366 65.8
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 4.1e-124 448.7 360 64.2
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 5.4e-124 448.4 358 65.6
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 1.6e-123 446.8 362 65.5
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.6e-123 446.8 358 66.8
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.0e-123 446.4 358 66.5
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 4.5e-123 445.3 359 65.2
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 5.9e-123 444.9 361 66.5
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 5.9e-123 444.9 362 64.6
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 7.7e-123 444.5 368 66.0
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.0e-122 444.1 363 64.7
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.3e-122 443.7 361 66.2
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 1.3e-122 443.7 362 64.4
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 2.3e-122 443.0 357 65.5
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 6.6e-122 441.4 361 64.3
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 8.6e-122 441.0 364 64.6
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 1.5e-121 440.3 357 64.7
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.9e-121 439.9 361 64.8
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.9e-121 439.9 359 64.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.9e-121 439.9 355 66.5
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.1e-120 436.4 355 62.5
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 3.6e-120 435.6 361 64.0
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 3.6e-120 435.6 361 64.3
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 4.7e-120 435.3 363 65.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 6.1e-120 434.9 361 63.7
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 8.0e-120 434.5 359 62.7
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 8.0e-120 434.5 360 63.1
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 8.0e-120 434.5 362 63.0
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 2.3e-119 433.0 356 63.8
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 3.0e-119 432.6 360 63.3
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 6.8e-119 431.4 360 63.3
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 8.9e-119 431.0 361 64.3
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.5e-118 430.3 363 63.6
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 1.5e-118 430.3 362 63.3
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 1.5e-118 430.3 363 63.6
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 2.6e-118 429.5 368 62.2
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 3.4e-118 429.1 357 63.3
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 3.4e-118 429.1 360 64.7
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 3.4e-118 429.1 358 63.7
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 7.5e-118 427.9 360 64.7
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 7.5e-118 427.9 353 66.0
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 2.2e-117 426.4 359 61.6
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 2.2e-117 426.4 353 65.4
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 4.9e-117 425.2 364 62.4
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 8.3e-117 424.5 359 61.3
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.4e-116 422.9 312 67.9
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.1e-116 422.2 364 62.4
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.0e-115 419.9 360 62.5
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 3.5e-115 419.1 361 62.6
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 3.5e-115 419.1 360 62.2
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 3.5e-115 419.1 299 70.9
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 3.5e-115 419.1 363 63.1
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 5.9e-115 418.3 361 62.3
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 1.0e-114 417.5 358 62.3
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 2.3e-114 416.4 363 62.0
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.0e-114 416.0 360 63.1
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.9e-114 415.6 360 62.2
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.1e-113 414.1 360 61.9
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 1.1e-113 414.1 359 63.0
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 1.5e-113 413.7 360 61.7
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 1.5e-113 413.7 358 61.2
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 3.3e-113 412.5 359 62.4
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 5.6e-113 411.8 347 64.8
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 7.3e-113 411.4 356 61.5
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 7.3e-113 411.4 362 61.3
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.6e-112 410.2 359 62.4
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 2.1e-112 409.8 362 61.0
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 2.8e-112 409.5 364 59.6
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.8e-112 409.5 363 60.9
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 6.2e-112 408.3 501 49.3
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 1.0e-111 407.5 357 61.9
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 1.8e-111 406.8 361 62.3
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.3e-111 406.4 359 61.8
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.3e-111 406.4 357 61.9
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 2.3e-111 406.4 361 60.9
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 3.1e-111 406.0 363 60.1
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 5.2e-111 405.2 361 59.8
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.2e-110 404.1 364 61.3
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 7.5e-110 401.4 364 59.6
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 9.8e-110 401.0 382 57.3
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 2.2e-109 399.8 361 59.6
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 4.9e-109 398.7 362 60.5
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 6.4e-109 398.3 364 59.1
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 1.1e-108 397.5 361 60.7
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 1.1e-108 397.5 361 60.7
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 1.4e-108 397.1 361 59.3
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 4.1e-108 395.6 368 59.5
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 4.6e-107 392.1 371 59.3
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 1.3e-106 390.6 363 59.5
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 3.9e-106 389.0 372 58.9
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.9e-105 386.7 362 59.1
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 4.3e-105 385.6 301 65.1
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 1.5e-102 377.1 326 62.6
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.7e-101 373.6 302 63.6
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 4.9e-101 372.1 345 58.0
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 4.1e-100 369.0 299 63.9
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 3.5e-99 365.9 357 57.4
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.2e-96 357.5 362 55.2
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-80 304.3 239 66.5
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.1e-79 301.2 227 69.6
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.3e-77 294.3 220 70.9
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 1.7e-77 293.9 306 50.7
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 3.5e-75 286.2 205 71.7
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.1e-73 281.2 212 68.4
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.1e-73 281.2 213 69.0
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 1.9e-73 280.4 297 50.2
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 4.0e-71 272.7 204 68.6
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 4.0e-63 246.1 208 61.5
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.3e-56 224.6 187 63.1
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 7.6e-54 215.3 217 56.2
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 6.1e-51 205.7 122 82.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 3.9e-50 203.0 137 68.6
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.1e-47 193.4 118 81.4
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.1e-44 184.9 118 78.0
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 2.7e-43 180.3 119 73.1
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.1e-42 176.0 112 76.8
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.2e-37 160.6 118 72.0
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.9e-34 149.8 95 80.0
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 8.8e-34 148.7 152 53.9
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 1.3e-21 108.2 81 67.9
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 8.8e-18 95.5 137 42.3
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 3.2e-12 77.0 55 67.3
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 2.2e-08 64.3 178 29.8
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 2.8e-08 63.9 195 28.7
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 1.1e-07 62.0 52 63.5
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.5e-06 57.0 189 28.6
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 3.5e-06 57.0 210 23.8
Ca_12098_v3 Cicer arietinum L. HOM05D018217 ORTHO05D006483 7.8e-06 55.8 60 50.0


User provided reference genes

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