Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 0.0e+00 1302.7 828 100.0
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 1.6e-192 677.2 854 60.3
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 8.4e-189 664.8 835 62.9
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.6e-187 660.6 800 61.4
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 4.6e-187 659.1 856 58.8
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 7.8e-187 658.3 858 60.0
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 4.8e-184 649.0 853 61.2
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 8.1e-184 648.3 859 59.7
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 3.1e-183 646.4 850 54.6
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 3.1e-183 646.4 824 61.9
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 4.9e-181 639.0 793 63.6
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 3.5e-179 632.9 865 56.4
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 3.5e-179 632.9 816 58.7
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 5.6e-177 625.5 851 58.3
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 7.3e-177 625.2 763 64.0
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 1.3e-176 624.4 820 61.0
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 2.0e-174 617.1 804 58.3
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 3.8e-173 612.8 791 60.1
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 2.4e-172 610.1 833 60.4
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 3.2e-172 609.8 824 56.9
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.3e-170 604.4 823 56.6
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 1.8e-170 604.0 797 56.7
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 1.8e-170 604.0 865 56.3
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 1.5e-169 600.9 832 59.4
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 7.4e-169 598.6 849 55.8
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 7.4e-169 598.6 856 55.5
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 1.6e-168 597.4 833 56.2
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 3.7e-168 596.3 807 57.6
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 6.2e-168 595.5 809 57.8
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 8.1e-168 595.1 841 55.9
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 1.1e-167 594.7 842 54.3
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 6.9e-167 592.0 831 55.4
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 7.6e-166 588.6 834 55.2
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 1.7e-165 587.4 846 55.7
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 1.1e-164 584.7 838 48.7
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 1.3e-162 577.8 810 49.3
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 3.0e-162 576.6 850 54.4
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 5.1e-162 575.9 848 54.4
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 9.6e-161 571.6 831 57.9
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 8.2e-160 568.5 817 55.3
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 3.1e-159 566.6 850 53.8
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 5.3e-159 565.8 831 50.8
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 1.0e-157 561.6 800 55.5
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 2.5e-156 557.0 746 55.8
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 9.3e-156 555.1 784 53.8
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 9.3e-156 555.1 784 53.8
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 4.6e-155 552.7 828 53.0
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 4.6e-155 552.7 828 53.0
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.3e-154 551.2 823 53.2
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 1.9e-153 547.4 824 47.0
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 5.7e-153 545.8 817 52.8
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 7.4e-153 545.4 820 52.8
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 7.4e-153 545.4 801 55.6
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 2.8e-152 543.5 697 60.3
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 2.8e-152 543.5 861 51.1
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 4.8e-152 542.7 706 59.3
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 8.2e-152 542.0 812 48.5
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 9.0e-151 538.5 747 55.2
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 1.2e-150 538.1 845 53.0
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 5.9e-150 535.8 814 52.2
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 7.7e-150 535.4 822 52.3
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 1.3e-149 534.6 847 51.6
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 6.5e-149 532.3 763 53.3
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 1.1e-148 531.6 808 53.6
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.7e-147 526.9 848 52.4
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 3.6e-147 526.6 817 53.5
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 4.6e-147 526.2 802 53.7
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 2.3e-146 523.9 856 44.2
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 1.5e-145 521.2 829 49.7
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 2.5e-145 520.4 871 51.5
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 4.8e-144 516.2 817 54.5
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 3.1e-143 513.5 779 45.7
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 5.9e-142 509.2 779 45.4
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 1.0e-141 508.4 756 54.0
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 2.2e-141 507.3 813 52.5
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 2.2e-141 507.3 823 51.5
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 3.2e-140 503.4 815 52.6
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 5.5e-140 502.7 836 45.2
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 6.1e-139 499.2 757 53.9
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 2.0e-137 494.2 768 52.3
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 2.0e-134 484.2 822 51.5
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 7.2e-132 475.7 783 38.6
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 3.9e-130 469.9 819 51.0
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 1.3e-128 464.9 829 42.9
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 5.5e-124 449.5 762 50.1
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 1.8e-114 417.9 815 40.5
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 2.7e-110 404.1 590 60.3
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.9e-100 371.3 800 43.1
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 6.0e-94 349.7 523 60.4
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 1.3e-93 348.6 495 57.0
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 2.3e-82 311.2 400 60.2
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 1.1e-79 302.4 526 57.4
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 3.6e-75 287.3 650 32.9
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 3.8e-72 277.3 789 39.5
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 8.4e-72 276.2 404 62.4
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 1.4e-63 248.8 731 42.8
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 2.5e-60 238.0 823 37.5
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 5.3e-50 203.8 239 44.8
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 5.8e-49 200.3 221 50.2
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 3.0e-45 188.0 229 48.0
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 1.9e-39 168.7 310 49.7
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 1.4e-34 152.5 501 32.1
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 5.9e-33 147.1 170 45.9
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 2.9e-24 118.2 132 50.8
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 8.8e-21 106.7 165 38.2
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 3.3e-20 104.8 100 77.0
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 2.2e-11 75.5 263 45.2
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 2.4e-10 72.0 74 51.4


User provided reference genes

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