Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 2.3e-45 185.3 97 100.0
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 1.6e-43 179.1 97 95.9
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.2e-30 136.3 92 77.2
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.6e-30 136.0 97 71.1
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 2.7e-30 135.2 97 70.1
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 3.5e-30 134.8 97 73.2
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.0e-29 133.3 95 70.5
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 1.8e-29 132.5 96 70.8
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 3.0e-29 131.7 91 74.7
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 5.1e-29 131.0 88 77.3
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 8.7e-29 130.2 96 69.8
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 8.7e-29 130.2 95 68.4
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.5e-28 128.6 91 74.7
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 2.5e-28 128.6 91 74.7
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.5e-28 128.6 96 68.8
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 3.3e-28 128.3 91 74.7
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 4.3e-28 127.9 96 71.9
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 4.3e-28 127.9 96 68.8
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.3e-27 126.3 95 68.4
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.3e-27 126.3 95 68.4
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 2.1e-27 125.6 97 69.1
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 2.1e-27 125.6 96 65.6
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 2.1e-27 125.6 92 68.5
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 2.8e-27 125.2 95 65.3
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 2.8e-27 125.2 94 67.0
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 3.7e-27 124.8 92 69.6
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 4.8e-27 124.4 92 71.7
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 4.8e-27 124.4 97 68.0
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 4.8e-27 124.4 96 66.7
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 6.2e-27 124.0 91 71.4
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 1.1e-26 123.2 97 68.0
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 1.1e-26 123.2 97 68.0
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 1.4e-26 122.9 91 71.4
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 1.8e-26 122.5 93 64.5
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 1.8e-26 122.5 97 67.0
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 4.0e-26 121.3 95 67.4
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 5.3e-26 120.9 94 67.0
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 6.9e-26 120.6 91 69.2
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 9.0e-26 120.2 88 70.5
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 1.2e-25 119.8 91 68.1
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 1.5e-25 119.4 85 71.8
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 2.0e-25 119.0 97 64.9
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 2.6e-25 118.6 89 68.5
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.6e-25 118.6 88 69.3
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 3.4e-25 118.2 84 71.4
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 3.4e-25 118.2 96 62.5
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 4.5e-25 117.9 91 69.2
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 5.8e-25 117.5 97 62.9
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 7.6e-25 117.1 86 69.8
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 9.9e-25 116.7 84 72.6
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 9.9e-25 116.7 87 69.0
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.7e-24 115.9 97 62.9
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.7e-24 115.9 97 62.9
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 1.7e-24 115.9 88 64.8
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 2.2e-24 115.5 80 72.5
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 2.2e-24 115.5 80 72.5
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 2.2e-24 115.5 95 63.2
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 2.2e-24 115.5 91 64.8
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 4.9e-24 114.4 97 64.9
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 6.4e-24 114.0 84 67.9
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 6.4e-24 114.0 90 65.6
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 8.4e-24 113.6 81 71.6
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 8.4e-24 113.6 91 64.8
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.4e-23 112.8 86 67.4
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.9e-23 112.5 86 67.4
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 2.4e-23 112.1 92 63.0
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 5.5e-23 110.9 84 67.9
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 5.5e-23 110.9 97 63.9
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 7.1e-23 110.5 91 65.9
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 7.1e-23 110.5 91 65.9
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 7.1e-23 110.5 84 65.5
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 9.3e-23 110.2 91 63.7
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 9.3e-23 110.2 79 69.6
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 9.3e-23 110.2 91 62.6
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 9.3e-23 110.2 91 62.6
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 9.3e-23 110.2 78 73.1
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 1.2e-22 109.8 91 64.8
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 1.2e-22 109.8 88 63.6
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 1.6e-22 109.4 81 69.1
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 2.7e-22 108.6 91 65.9
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 4.6e-22 107.8 80 67.5
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 4.6e-22 107.8 88 64.8
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 4.6e-22 107.8 88 64.8
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 4.6e-22 107.8 85 63.5
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 7.9e-22 107.1 88 64.8
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 7.9e-22 107.1 92 59.8
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 7.9e-22 107.1 91 63.7
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 3.0e-21 105.1 84 64.3
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 6.7e-21 104.0 89 64.0
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 6.7e-21 104.0 89 64.0
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 8.7e-21 103.6 89 62.9
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 1.5e-20 102.8 89 62.9
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 1.9e-20 102.4 72 73.6
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 2.5e-20 102.1 91 61.5
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 2.5e-20 102.1 80 65.0
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 2.5e-20 102.1 85 61.2
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 9.6e-20 100.1 81 63.0
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 6.2e-19 97.4 76 64.5
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 1.1e-18 96.7 69 72.5
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 1.1e-18 96.7 85 60.0
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 9.0e-18 93.6 86 54.7
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.2e-17 93.2 66 71.2
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 7.6e-17 90.5 69 71.0
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 1.3e-16 89.7 87 56.3
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 7.1e-15 84.0 76 55.3
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-14 82.4 63 63.5
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 1.0e-13 80.1 77 57.1
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 2.3e-13 79.0 66 65.2
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 5.7e-12 74.3 82 50.0
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 2.1e-06 55.8 81 37.0


User provided reference genes

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