Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 0.0e+00 1466.4 731 100.0
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 2.1e-244 849.4 711 61.6
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 1.3e-233 813.5 712 58.8
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.2e-233 812.8 723 59.3
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 8.9e-227 790.8 719 55.6
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 2.4e-219 766.1 722 55.8
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 2.4e-216 756.1 728 54.9
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.1e-215 753.1 664 59.0
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 7.8e-215 751.1 720 55.8
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 4.3e-213 745.3 714 55.9
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 9.6e-213 744.2 722 54.6
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 9.0e-211 737.6 719 54.8
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 3.2e-208 729.2 741 52.9
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 9.3e-208 727.6 708 53.8
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.1e-207 726.5 655 58.8
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 3.5e-207 725.7 709 54.6
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 1.0e-206 724.2 715 52.7
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 7.4e-205 718.0 717 53.3
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.3e-204 717.2 714 54.5
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.1e-204 716.5 748 51.9
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 2.4e-203 713.0 684 54.5
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 9.0e-203 711.1 683 56.8
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 1.9e-200 703.4 713 52.3
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 4.2e-200 702.2 720 52.1
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 7.1e-200 701.4 720 53.5
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 1.6e-199 700.3 718 52.2
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 2.7e-199 699.5 713 53.0
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 3.0e-198 696.0 720 53.3
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 8.7e-198 694.5 717 52.6
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 4.3e-197 692.2 711 52.5
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 5.6e-197 691.8 711 52.3
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.3e-196 690.6 691 53.0
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.4e-195 687.2 720 52.6
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 1.8e-195 686.8 717 51.3
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 2.4e-195 686.4 714 52.5
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 2.4e-195 686.4 722 51.8
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 4.5e-194 682.2 732 50.4
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 5.8e-194 681.8 679 53.6
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 1.0e-193 681.0 725 51.3
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 1.3e-193 680.6 718 51.0
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 2.2e-193 679.9 748 49.1
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 3.8e-193 679.1 718 51.1
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 4.9e-193 678.7 718 50.6
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 7.1e-192 674.9 712 50.7
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 3.5e-191 672.5 645 55.8
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 6.0e-191 671.8 706 51.4
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 7.9e-191 671.4 720 50.6
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 1.0e-190 671.0 727 51.7
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 1.3e-190 670.6 721 51.7
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 3.0e-190 669.5 740 50.0
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 2.6e-186 656.4 708 51.0
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 2.6e-186 656.4 710 49.7
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 5.9e-186 655.2 720 49.4
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 6.1e-183 645.2 720 48.8
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 7.9e-183 644.8 677 52.0
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.0e-182 644.4 698 50.6
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 3.9e-182 642.5 718 51.5
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 8.7e-182 641.3 721 49.7
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 1.9e-181 640.2 722 48.2
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 3.1e-179 632.9 562 58.7
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 6.9e-179 631.7 719 49.0
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 1.7e-177 627.1 765 46.9
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 5.0e-177 625.5 765 46.4
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 1.8e-174 617.1 705 47.9
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 2.3e-174 616.7 725 47.2
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 9.7e-173 611.3 717 46.3
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 3.7e-172 609.4 723 46.6
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.1e-171 607.8 713 48.2
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 6.9e-171 605.1 707 47.1
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.5e-170 602.4 735 47.2
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 2.9e-169 599.7 705 47.7
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.9e-168 597.0 716 45.9
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 2.5e-168 596.7 725 45.5
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 6.1e-167 592.0 715 46.3
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 2.3e-166 590.1 680 49.1
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 3.9e-166 589.3 705 46.1
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 6.7e-166 588.6 705 46.5
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 8.8e-166 588.2 705 46.5
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 2.6e-165 586.6 717 45.3
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.8e-164 583.2 712 46.1
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 3.7e-164 582.8 705 46.5
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 6.3e-164 582.0 721 48.1
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 3.1e-163 579.7 663 49.0
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 9.1e-163 578.2 732 44.5
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.7e-161 573.9 661 46.0
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 1.9e-160 570.5 715 45.2
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 4.2e-160 569.3 763 43.6
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 4.7e-159 565.8 716 45.3
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 1.0e-158 564.7 716 44.7
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 4.4e-157 559.3 713 44.7
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 6.3e-156 555.4 723 43.2
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.7e-154 550.1 653 47.6
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.1e-152 544.7 689 44.3
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.3e-148 531.2 677 44.8
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 1.1e-144 518.1 697 42.5
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 8.3e-140 501.9 610 46.7
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.5e-136 491.1 770 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.8e-134 484.2 769 39.1
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 7.5e-133 478.8 561 47.4
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 3.5e-130 469.9 759 40.2
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 6.8e-126 455.7 524 49.2
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 5.4e-123 446.0 701 37.7
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.0e-122 444.1 426 56.6
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 6.0e-122 442.6 517 49.3
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.5e-117 427.9 648 39.8
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 2.6e-117 427.2 522 48.3
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 9.8e-117 425.2 521 48.4
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.1e-112 411.8 480 49.2
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 7.3e-112 409.1 820 35.0
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 8.4e-108 395.6 652 38.3
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.9e-100 369.8 506 44.5
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 2.2e-92 344.4 275 61.8
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 2.3e-89 334.3 374 49.5
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 1.1e-86 325.5 258 60.5
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 8.4e-76 289.3 529 36.7
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 1.1e-75 288.9 255 55.7
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 1.4e-70 271.9 198 62.1
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 2.2e-68 264.6 295 48.1
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 2.0e-61 241.5 338 42.6
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.2e-53 215.7 121 81.0
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 4.4e-48 197.2 294 39.8
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 8.8e-33 146.4 103 68.9
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.8e-26 124.8 130 51.5
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 1.4e-25 122.5 138 47.8
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 5.2e-25 120.6 154 48.1
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 8.9e-25 119.8 127 48.8
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 2.6e-24 118.2 132 50.8
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 4.4e-24 117.5 157 41.4
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 4.4e-16 90.9 77 58.4
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.3e-12 79.3 87 49.4
SEGI_05558 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 6.8e-09 67.0 119 31.1
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 9.8e-08 63.2 63 46.0
A08p10430 Brassica napus HOM05D005685 ORTHO05D007046 4.1e-06 57.8 92 42.4


User provided reference genes

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