Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017468 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-147 525.4 254 100.0
DCAR_017278 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-134 481.9 249 93.2
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-92 342.4 253 64.8
DCAR_017018 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-89 333.2 250 62.8
DCAR_010634 Daucus carota HOM05D002492 ORTHO05D002621 8.8e-89 330.9 253 62.5
DCAR_002614 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-83 313.5 250 60.0
DCAR_010474 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-82 310.5 248 60.5
DCAR_024285 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-82 308.9 249 59.8
DCAR_024224 Daucus carota HOM05D002492 ORTHO05D002621 4.7e-82 308.5 236 61.9
DCAR_017879 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-81 307.0 254 57.5
DCAR_005612 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-81 306.2 254 57.1
DCAR_010630 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-76 290.4 250 56.0
DCAR_020330 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-76 289.3 247 56.3
DCAR_001053 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-75 286.6 249 55.0
DCAR_029452 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-73 279.6 244 55.7
DCAR_029614 Daucus carota HOM05D002492 ORTHO05D002621 4.0e-73 278.9 257 52.5
DCAR_017458 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-70 268.9 199 64.8
DCAR_021161 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-68 263.5 218 56.4
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 5.0e-68 261.9 197 63.5
DCAR_011193 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-67 257.7 192 62.5
DCAR_031756 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-65 253.8 208 57.7
DCAR_022677 Daucus carota HOM05D002492 ORTHO05D002621 3.4e-64 249.2 221 54.3
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-64 248.8 213 56.3
DCAR_023749 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-63 247.3 250 51.2
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 8.3e-63 244.6 245 51.8
DCAR_031757 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-61 238.8 203 55.7
DCAR_011402 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-60 236.5 181 61.3
DCAR_015810 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-57 227.6 160 66.9
DCAR_028337 Daucus carota HOM05D002492 ORTHO05D002621 4.9e-55 218.8 202 54.0
DCAR_024102 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-53 211.8 250 48.4
DCAR_017482 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-52 208.0 247 44.9
DCAR_024352 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-50 203.8 243 44.9
DCAR_031312 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-50 201.4 183 55.7
DCAR_010788 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-49 201.1 168 53.6
DCAR_017267 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-47 192.6 162 58.0
DCAR_030958 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-45 186.4 250 40.8
DCAR_005544 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-44 183.7 247 40.9
DCAR_010020 Daucus carota HOM05D002492 ORTHO05D002621 9.8e-40 167.9 169 53.8
DCAR_030129 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-39 167.2 249 40.2
DCAR_028507 Daucus carota HOM05D002492 ORTHO05D002621 5.4e-38 162.2 233 35.2
DCAR_017541 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-36 154.8 231 37.7
DCAR_031396 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-35 152.9 234 36.3
DCAR_031398 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-32 142.5 215 35.3
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 2.9e-31 139.8 233 31.8
DCAR_031412 Daucus carota HOM05D002492 ORTHO05D002621 4.9e-31 139.0 226 32.7
DCAR_031404 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-30 136.3 233 30.9
DCAR_026146 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-29 134.0 247 28.7
DCAR_017540 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-29 133.7 239 30.5
DCAR_031411 Daucus carota HOM05D002492 ORTHO05D002621 3.5e-29 132.9 238 33.2
DCAR_028491 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-28 130.2 231 31.2
DCAR_031399 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-28 130.2 226 30.1
DCAR_031408 Daucus carota HOM05D002492 ORTHO05D002621 6.6e-28 128.6 229 32.8
DCAR_031501 Daucus carota HOM05D002492 ORTHO05D002621 9.6e-27 124.8 240 30.8
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-26 123.2 239 29.3
DCAR_022721 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-26 122.9 199 32.2
DCAR_024328 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-26 122.9 247 28.7
DCAR_017878 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-25 121.3 253 27.3
DCAR_010411 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-25 120.9 238 27.3
DCAR_024354 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-25 120.9 232 31.5
DCAR_020839 Daucus carota HOM05D002492 ORTHO05D002621 8.9e-25 118.2 230 28.7
DCAR_028082 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-24 117.1 205 35.1
DCAR_005616 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-24 116.7 248 27.8
DCAR_028093 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-24 116.7 230 29.1
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 5.8e-24 115.5 228 26.8
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 7.6e-24 115.2 229 27.5
DCAR_030199 Daucus carota HOM05D002492 ORTHO05D002621 7.6e-24 115.2 241 30.3
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 9.9e-24 114.8 229 27.5
DCAR_010867 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-23 113.6 245 28.2
DCAR_027468 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-23 113.6 238 30.3
DCAR_022644 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-23 112.8 196 34.2
DCAR_005968 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-22 109.8 194 29.4
DCAR_020287 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-22 109.8 194 29.4
DCAR_021065 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-22 109.8 194 29.4
DCAR_017486 Daucus carota HOM05D002492 ORTHO05D002621 5.4e-22 109.0 230 26.5
DCAR_031407 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-21 107.5 208 31.7
DCAR_027578 Daucus carota HOM05D002492 ORTHO05D002621 4.6e-21 105.9 224 29.5
DCAR_031854 Daucus carota HOM05D002492 ORTHO05D002621 6.0e-21 105.5 168 33.9
DCAR_017735 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-20 104.4 223 27.8
DCAR_031392 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-20 104.4 239 29.3
DCAR_004789 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-20 103.2 236 27.1
DCAR_032122 Daucus carota HOM05D002492 ORTHO05D002621 5.1e-20 102.4 247 24.7
DCAR_007165 Daucus carota HOM05D002492 ORTHO05D002621 6.6e-20 102.1 196 29.6
DCAR_024329 Daucus carota HOM05D002492 ORTHO05D002621 6.6e-20 102.1 232 26.7
DCAR_001591 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-19 100.9 197 28.9
DCAR_031409 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-19 100.9 147 37.4
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-19 100.1 196 28.1
DCAR_010631 Daucus carota HOM05D002492 ORTHO05D002621 4.3e-19 99.4 244 28.3
DCAR_028510 Daucus carota HOM05D002492 ORTHO05D002621 4.3e-19 99.4 167 29.3
DCAR_026397 Daucus carota HOM05D002492 ORTHO05D002621 5.6e-19 99.0 194 28.4
DCAR_028512 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-18 96.7 202 28.7
DCAR_025600 Daucus carota HOM05D002492 ORTHO05D002621 8.1e-18 95.1 229 28.4
DCAR_003523 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-17 94.4 226 27.0
DCAR_008877 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-17 94.4 229 24.9
DCAR_031904 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-17 94.4 248 24.6
DCAR_029616 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-17 93.6 199 26.1
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 3.1e-17 93.2 233 27.5
DCAR_021052 Daucus carota HOM05D002492 ORTHO05D002621 4.0e-17 92.8 182 28.6
DCAR_032155 Daucus carota HOM05D002492 ORTHO05D002621 9.0e-17 91.7 231 25.5
DCAR_021053 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-16 91.3 240 26.2
DCAR_032006 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-16 91.3 230 25.7
DCAR_002142 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-16 90.1 231 26.0
DCAR_017537 Daucus carota HOM05D022071 ORTHO05D002621 2.6e-16 90.1 178 29.2
DCAR_017538 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-16 90.1 166 32.5
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 7.6e-16 88.6 242 24.4
DCAR_024144 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-15 87.8 192 27.1
DCAR_018623 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-15 87.4 134 29.9
DCAR_001183 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-15 86.7 172 31.4
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 6.4e-15 85.5 250 24.8
DCAR_017251 Daucus carota HOM05D002492 ORTHO05D002621 6.4e-15 85.5 201 26.9
DCAR_028506 Daucus carota HOM05D002492 ORTHO05D002621 6.4e-15 85.5 91 37.4
DCAR_031414 Daucus carota HOM05D002492 ORTHO05D002621 8.4e-15 85.1 171 30.4
DCAR_010412 Daucus carota HOM05D036599 ORTHO05D002621 9.3e-14 81.6 175 26.3
DCAR_022039 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-14 81.6 110 31.8
DCAR_029815 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-13 81.3 225 22.7
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-13 81.3 239 24.7
DCAR_028508 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-13 80.9 126 35.7
DCAR_031394 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-13 80.5 227 26.0
DCAR_005341 Daucus carota HOM05D002492 ORTHO05D002621 3.5e-13 79.7 198 26.3
DCAR_020328 Daucus carota HOM05D002492 ORTHO05D002621 4.6e-13 79.3 235 23.0
DCAR_031458 Daucus carota HOM05D002492 ORTHO05D002621 4.6e-13 79.3 210 26.7
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 3.9e-12 76.3 242 23.6
DCAR_021348 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-12 75.1 194 25.3
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 8.7e-12 75.1 248 23.4
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-11 73.6 226 24.8
DCAR_017690 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-11 73.6 228 23.7
DCAR_016041 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-11 73.2 107 33.6
DCAR_022394 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-11 73.2 251 21.9
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-11 72.4 226 24.8
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 7.4e-11 72.0 235 23.4
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-11 71.6 230 24.3
DCAR_031418 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-10 71.2 127 37.0
Zm00001eb388870 Zea mays HOM05D008312 ORTHO05D010433 1.3e-10 71.2 221 24.4
Zm00001eb388900 Zea mays HOM05D008312 ORTHO05D010433 1.3e-10 71.2 220 24.5
DCAR_028571 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-10 70.1 155 29.7
DCAR_005840 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-10 69.7 235 21.7
DCAR_028727 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-10 69.7 235 21.7
DCAR_017466 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-09 68.2 158 26.6
Potri.019G061550 Populus trichocarpa HOM05D006849 ORTHO05D003348 1.4e-09 67.8 213 22.1
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-09 67.4 230 24.3
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.4e-09 67.0 247 22.7
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 2.4e-09 67.0 247 22.7
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.4e-09 67.0 247 22.7
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 2.4e-09 67.0 247 22.7
DCAR_013360 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-09 67.0 159 26.4
DCAR_031288 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-09 67.0 106 34.0
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 3.1e-09 66.6 247 22.7
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 6.9e-09 65.5 247 22.3
TWI38G1001 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.9e-09 65.5 231 23.4
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-08 64.3 235 22.1
DCAR_010358 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-08 64.3 106 34.0
Aqoxy7G02103 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 2.6e-08 63.5 151 25.8
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 2.6e-08 63.5 226 23.5
DCAR_017543 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-08 62.8 156 27.6
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 5.8e-08 62.4 247 24.3
Potri.003G004401 Populus trichocarpa HOM05D006849 ORTHO05D003348 7.6e-08 62.0 216 22.7
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 7.6e-08 62.0 238 20.6
DCAR_001590 Daucus carota HOM05D011940 ORTHO05D177507 9.9e-08 61.6 105 30.5
DCAR_017691 Daucus carota HOM05D002492 ORTHO05D002621 9.9e-08 61.6 105 32.4
DCAR_031648 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-07 61.2 233 21.9
Aqoxy1G03705 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 1.7e-07 60.8 151 25.2
Zm00001eb179900 Zea mays HOM05D008312 ORTHO05D010433 1.7e-07 60.8 243 21.4
DCAR_031313 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-07 60.5 145 26.9
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 3.8e-07 59.7 177 23.7
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 3.8e-07 59.7 211 26.1
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-07 59.7 231 26.0
CAN.G1160.3 Capsicum annuum HOM05D002907 ORTHO05D000065 6.4e-07 58.9 135 29.6
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-06 58.2 255 20.8
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-06 58.2 153 27.5
DCAR_021272 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-06 57.8 179 24.6
DCAR_028495 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-06 57.8 113 34.5
DCAR_031322 Daucus carota HOM05D002907 ORTHO05D000065 1.4e-06 57.8 233 23.2
PSO017G4603 Papaver somniferum HOM05D000824 ORTHO05D003555 1.4e-06 57.8 197 27.9
PSO478G2603 Papaver somniferum HOM05D000824 ORTHO05D003555 1.9e-06 57.4 195 27.2
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 1.9e-06 57.4 223 22.9
Sp6g34920 Schrenkiella parvula HOM05D000824 ORTHO05D003555 1.9e-06 57.4 196 27.6
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 2.4e-06 57.0 197 23.9
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 2.4e-06 57.0 133 30.8
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 3.2e-06 56.6 138 26.8
Potri.015G057300 Populus trichocarpa HOM05D000824 ORTHO05D003555 4.2e-06 56.2 199 26.1
DCAR_001182 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-06 55.8 146 24.7
DCAR_011568 Daucus carota HOM05D000824 ORTHO05D003555 5.5e-06 55.8 227 26.4
DCAR_011569 Daucus carota HOM05D000824 ORTHO05D003555 5.5e-06 55.8 227 26.4
Thhalv10027192m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.5e-06 55.8 222 19.8
Thhalv10013014m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 7.1e-06 55.5 196 27.6
CANSAT80G1236 Cannabis sativa HOM05D000824 ORTHO05D003555 9.3e-06 55.1 198 24.7
DCAR_013361 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-06 55.1 106 24.5
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 9.3e-06 55.1 137 29.9


User provided reference genes

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