Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017375 Daucus carota HOM05D014268 ORTHO05D014203 1.1e-92 343.2 166 100.0
DCAR_018063 Daucus carota HOM05D014268 ORTHO05D014203 1.1e-92 343.2 166 100.0
DCAR_024809 Daucus carota HOM05D014268 ORTHO05D014203 1.1e-92 343.2 166 100.0
DCAR_005058 Daucus carota HOM05D014268 ORTHO05D014203 6.2e-75 284.3 166 81.3
DCAR_010261 Daucus carota HOM05D014268 ORTHO05D014203 1.7e-72 276.2 166 79.5
DCAR_005480 Daucus carota HOM05D014268 ORTHO05D014203 2.3e-69 265.8 166 75.3
DCAR_022724 Daucus carota HOM05D014268 ORTHO05D014203 2.3e-69 265.8 166 75.3
DCAR_028303 Daucus carota HOM05D014268 ORTHO05D014203 1.6e-67 259.6 166 72.9
DCAR_024272 Daucus carota HOM05D014268 ORTHO05D014203 7.6e-57 224.2 166 69.3
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.9e-09 65.1 149 28.2
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-08 63.5 149 28.2
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-08 63.5 129 29.5
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-08 63.2 158 27.8
QL03p033496 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-08 62.4 135 29.6
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 6.5e-08 61.6 142 28.2
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-08 61.2 129 28.7
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 1.1e-07 60.8 151 24.5
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 1.1e-07 60.8 151 24.5
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-07 59.7 158 27.2
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 2.5e-07 59.7 159 24.5
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-07 59.3 127 28.3
DCAR_004920 Daucus carota HOM05D024387 ORTHO05D014203 3.2e-07 59.3 135 25.9
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-07 58.5 158 25.9
AUR62034691 Chenopodium quinoa HOM05D008685 ORTHO05D000022 5.5e-07 58.5 128 29.7
DCAR_018175 Daucus carota HOM05D024387 ORTHO05D014203 5.5e-07 58.5 114 33.3
RcHm_v2.0_Chr2g0128961 Rosa chinensis HOM05D000003 ORTHO05D000022 7.2e-07 58.2 131 29.8
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 9.4e-07 57.8 121 31.4
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.4e-07 57.8 158 25.3
SHI41116 Sapria himalayana HOM05D000024 ORTHO05D000007 2.1e-06 56.6 126 27.0
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 2.1e-06 56.6 132 28.8
FvH4_3g30492 Fragaria vesca HOM05D000003 ORTHO05D000022 7.9e-06 54.7 93 29.0
Nitab4.5_0000771g0040 Nicotiana tabacum HOM05D000650 ORTHO05D010020 7.9e-06 54.7 106 34.0
SHI31029 Sapria himalayana HOM05D004990 ORTHO05D000022 7.9e-06 54.7 147 25.2
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 7.9e-06 54.7 151 27.2


User provided reference genes

Program Settings