Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017349 Daucus carota HOM05D000874 ORTHO05D001049 2.6e-24 114.4 52 100.0
DCAR_013957 Daucus carota HOM05D000874 ORTHO05D001049 1.7e-15 85.1 50 68.0
TAR369G0064 Trochodendron aralioides HOM05D000874 ORTHO05D001049 1.8e-09 65.1 49 53.1
Glyma.19G190500 Glycine max HOM05D000874 ORTHO05D001049 1.2e-08 62.4 50 54.0
Lsat_1_v5_gn_1_50520 Lactuca sativa HOM05D000874 ORTHO05D001049 1.6e-08 62.0 49 51.0
Lj2A127G88 Lonicera japonica HOM05D000874 ORTHO05D001049 4.5e-08 60.5 50 48.0
Cfa016523 Carpinus fangiana HOM05D000874 ORTHO05D001049 5.9e-08 60.1 47 51.1
HanXRQChr11g0351071 Helianthus annuus HOM05D000874 ORTHO05D001049 5.9e-08 60.1 50 46.0
Medtr7g103570 Medicago truncatula HOM05D000874 ORTHO05D001049 5.9e-08 60.1 50 50.0
Psat3g036200 Pisum sativum HOM05D000874 ORTHO05D001049 5.9e-08 60.1 50 48.0
HanXRQChr11g0351081 Helianthus annuus HOM05D000874 ORTHO05D001049 7.7e-08 59.7 49 44.9
SMO238G0024 Selaginella moellendorffii HOM05D000874 ORTHO05D001049 7.7e-08 59.7 50 48.0
Cfa016522 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.0e-07 59.3 48 47.9
Haze_19523 Corylus avellana HOM05D000874 ORTHO05D001049 1.0e-07 59.3 49 46.9
Lsat_1_v5_gn_1_50480 Lactuca sativa HOM05D000874 ORTHO05D001049 1.0e-07 59.3 50 46.0
MD14G1014100 Malus domestica HOM05D000874 ORTHO05D001049 1.0e-07 59.3 49 44.9
A04p28040 Brassica napus HOM05D000874 ORTHO05D001049 1.3e-07 58.9 49 51.0
BraA04t18291Z Brassica rapa HOM05D000874 ORTHO05D001049 1.3e-07 58.9 49 51.0
SGA_v2.0_scaffold184G39919 Striga asiatica HOM05D000874 ORTHO05D001049 1.7e-07 58.5 50 38.0
Thecc.05G079800 Theobroma cacao HOM05D000874 ORTHO05D001049 1.7e-07 58.5 48 43.8
Solyc09g008950.1 Solanum lycopersicum HOM05D000874 ORTHO05D001049 2.2e-07 58.2 49 42.9
ECA248G1348 Erigeron canadensis HOM05D000874 ORTHO05D001049 2.9e-07 57.8 50 42.0
Migut.L01749 Erythranthe guttata HOM05D000874 ORTHO05D001049 2.9e-07 57.8 50 42.0
HanXRQChr11g0351091 Helianthus annuus HOM05D000874 ORTHO05D001049 3.8e-07 57.4 49 42.9
Medtr7g103560 Medicago truncatula HOM05D000874 ORTHO05D001049 3.8e-07 57.4 50 44.0
Actinidia38430 Actinidia chinensis HOM05D000874 ORTHO05D001049 5.0e-07 57.0 49 44.9
Carub.0004s1835 Capsella rubella HOM05D000874 ORTHO05D001049 5.0e-07 57.0 49 42.9
Lalb_Chr20g0112271 Lupinus albus HOM05D000874 ORTHO05D001049 5.0e-07 57.0 50 44.0
HPP92_020982 Vanilla planifolia HOM05D000874 ORTHO05D001049 5.0e-07 57.0 50 42.0
Carub.0004s1834 Capsella rubella HOM05D000874 ORTHO05D001049 6.5e-07 56.6 49 44.9
Potri.010G244200 Populus trichocarpa HOM05D000874 ORTHO05D001049 6.5e-07 56.6 49 40.8
SEGI_29202 Sequoiadendron giganteum HOM05D000874 ORTHO05D001049 6.5e-07 56.6 50 46.0
SEGI_35425 Sequoiadendron giganteum HOM05D000874 ORTHO05D001049 6.5e-07 56.6 50 46.0
AL4G32720 Arabidopsis lyrata HOM05D000874 ORTHO05D001049 1.1e-06 55.8 49 42.9
Ciclev10013817m.g Citrus clementina HOM05D000874 ORTHO05D001049 1.1e-06 55.8 49 40.8
Rhsim03G0082500 Rhododendron simsii HOM05D000874 ORTHO05D001049 1.1e-06 55.8 49 44.9
RcHm_v2.0_Chr4g0442541 Rosa chinensis HOM05D000874 ORTHO05D001049 1.1e-06 55.8 49 40.8
HanXRQChr01g0028371 Helianthus annuus HOM05D000874 ORTHO05D001049 1.5e-06 55.5 51 45.1
MD14G1013900 Malus domestica HOM05D000874 ORTHO05D001049 1.5e-06 55.5 49 40.8
Peaxi162Scf00412g00713 Petunia axillaris HOM05D000874 ORTHO05D001049 1.5e-06 55.5 49 42.9
TAR369G1004 Trochodendron aralioides HOM05D000874 ORTHO05D001049 2.5e-06 54.7 49 40.8
Aa31LG5G21760 Aethionema arabicum HOM05D000874 ORTHO05D001049 3.2e-06 54.3 48 43.8
Potri.015G059000 Populus trichocarpa HOM05D000874 ORTHO05D001049 3.2e-06 54.3 49 40.8
Sp4g18840 Schrenkiella parvula HOM05D000874 ORTHO05D001049 3.2e-06 54.3 49 40.8
Hund02573 Selenicereus undatus HOM05D000874 ORTHO05D001049 3.2e-06 54.3 49 44.9
vmacro07376 Vaccinium macrocarpon HOM05D000874 ORTHO05D001049 3.2e-06 54.3 49 44.9
Cfa016521 Carpinus fangiana HOM05D000874 ORTHO05D001049 4.2e-06 53.9 48 41.7
COL.COLO4_29833 Corchorus olitorius HOM05D000874 ORTHO05D001049 4.2e-06 53.9 44 47.7
Haze_19522 Corylus avellana HOM05D000874 ORTHO05D001049 4.2e-06 53.9 48 41.7
CARHR130830 Cardamine hirsuta HOM05D000874 ORTHO05D001049 5.5e-06 53.5 50 44.0
Ciclev10018923m.g Citrus clementina HOM05D000874 ORTHO05D001049 5.5e-06 53.5 49 44.9
BcaB02g09347 Brassica carinata HOM05D000874 ORTHO05D001049 7.2e-06 53.1 49 40.8
Cpa.g.sc5.91 Carica papaya HOM05D000874 ORTHO05D001049 7.2e-06 53.1 49 38.8
FvH4_6g17650 Fragaria vesca HOM05D000874 ORTHO05D001049 7.2e-06 53.1 46 41.3
FAN09G2693 Fragaria x ananassa HOM05D000874 ORTHO05D001049 7.2e-06 53.1 46 41.3
PGSC0003DMG401002685 Solanum tuberosum HOM05D000874 ORTHO05D001049 7.2e-06 53.1 49 36.7
CDE07G0830 Ceratophyllum demersum HOM05D000874 ORTHO05D001049 9.5e-06 52.8 49 36.7
Potri.010G244400 Populus trichocarpa HOM05D000874 ORTHO05D001049 9.5e-06 52.8 44 45.5
TAR369G0865 Trochodendron aralioides HOM05D000874 ORTHO05D001049 9.5e-06 52.8 49 40.8


User provided reference genes

Program Settings