Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017339 Daucus carota HOM05D004122 ORTHO05D004468 0.0e+00 1800.4 948 100.0
DCAR_030595 Daucus carota HOM05D004122 ORTHO05D004468 0.0e+00 1170.2 840 76.9
DCAR_024510 Daucus carota HOM05D004122 ORTHO05D004468 8.9e-227 791.2 877 52.5
DCAR_030158 Daucus carota HOM05D004122 ORTHO05D004468 5.4e-224 781.9 877 52.6
DCAR_022666 Daucus carota HOM05D004122 ORTHO05D004468 6.1e-143 512.7 896 38.5
DCAR_002213 Daucus carota HOM05D004122 ORTHO05D004468 9.7e-133 478.8 878 37.8
DCAR_015972 Daucus carota HOM05D004122 ORTHO05D004468 1.3e-129 468.4 830 38.4
DCAR_022968 Daucus carota HOM05D004122 ORTHO05D004468 1.7e-113 414.8 444 50.9
DCAR_007691 Daucus carota HOM05D004122 ORTHO05D004468 2.6e-61 241.5 808 27.6
DCAR_007894 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-40 172.9 801 25.8
DCAR_004018 Daucus carota HOM05D004122 ORTHO05D004468 5.7e-40 170.6 768 24.3
DCAR_000971 Daucus carota HOM05D004122 ORTHO05D004468 9.7e-40 169.9 596 24.2
DCAR_031541 Daucus carota HOM05D004122 ORTHO05D004468 3.7e-39 167.9 542 26.9
DCAR_028793 Daucus carota HOM05D004122 ORTHO05D004468 2.4e-38 165.2 607 25.7
DCAR_024191 Daucus carota HOM05D004122 ORTHO05D004468 6.9e-38 163.7 799 25.4
DCAR_005256 Daucus carota HOM05D004122 ORTHO05D004468 1.4e-35 156.0 578 25.3
DCAR_010062 Daucus carota HOM05D004122 ORTHO05D004468 1.0e-33 149.8 304 32.2
DCAR_015266 Daucus carota HOM05D004122 ORTHO05D004468 1.4e-33 149.4 397 29.5
DCAR_001014 Daucus carota HOM05D004122 ORTHO05D004468 3.9e-33 147.9 496 26.2
DCAR_002328 Daucus carota HOM05D004122 ORTHO05D004468 5.1e-33 147.5 576 25.2
DCAR_028659 Daucus carota HOM05D004122 ORTHO05D004468 2.0e-32 145.6 773 23.2
DCAR_029799 Daucus carota HOM05D022569 ORTHO05D006345 2.0e-32 145.6 105 70.5
DCAR_031546 Daucus carota HOM05D004122 ORTHO05D004468 1.3e-31 142.9 497 26.2
DCAR_014809 Daucus carota HOM05D004122 ORTHO05D004468 2.8e-31 141.7 846 22.5
DCAR_011921 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-30 139.8 856 23.7
DCAR_028554 Daucus carota HOM05D004122 ORTHO05D004468 2.6e-29 135.2 836 23.8
DCAR_010309 Daucus carota HOM05D004122 ORTHO05D004468 7.2e-27 127.1 555 25.2
DCAR_010428 Daucus carota HOM05D004122 ORTHO05D004468 7.2e-27 127.1 611 22.9
DCAR_028573 Daucus carota HOM05D004122 ORTHO05D004468 7.9e-26 123.6 871 20.9
DCAR_015487 Daucus carota HOM05D004122 ORTHO05D004468 2.3e-25 122.1 564 22.9
DCAR_022710 Daucus carota HOM05D004122 ORTHO05D004468 5.2e-25 120.9 584 23.8
DCAR_027728 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-24 119.8 975 21.8
DCAR_027640 Daucus carota HOM05D004122 ORTHO05D004468 1.5e-24 119.4 975 21.8
DCAR_027726 Daucus carota HOM05D004122 ORTHO05D004468 2.0e-24 119.0 662 21.0
DCAR_001065 Daucus carota HOM05D012571 ORTHO05D004468 5.3e-22 110.9 781 21.9
DCAR_000311 Daucus carota HOM05D004122 ORTHO05D004468 2.0e-21 109.0 784 22.3
DCAR_007302 Daucus carota HOM05D004122 ORTHO05D004468 1.7e-20 105.9 352 25.6
DCAR_024668 Daucus carota HOM05D004122 ORTHO05D004468 3.8e-20 104.8 741 20.9
DCAR_030487 Daucus carota HOM05D004122 ORTHO05D004468 5.5e-19 100.9 351 25.6
DCAR_029037 Daucus carota HOM05D004122 ORTHO05D004468 3.6e-18 98.2 792 22.6
DCAR_000822 Daucus carota HOM05D004122 ORTHO05D004468 8.0e-18 97.1 626 22.4
DCAR_031569 Daucus carota HOM05D004122 ORTHO05D004468 5.2e-17 94.4 647 24.0
DCAR_028561 Daucus carota HOM05D004122 ORTHO05D004468 8.8e-17 93.6 441 23.8
DCAR_022626 Daucus carota HOM05D004122 ORTHO05D004468 2.6e-16 92.0 606 22.6
DCAR_013804 Daucus carota HOM05D004122 ORTHO05D004468 5.7e-16 90.9 347 25.6
DCAR_017404 Daucus carota HOM05D022569 ORTHO05D178128 5.7e-16 90.9 102 48.0
DCAR_030266 Daucus carota HOM05D012331 ORTHO05D004468 9.7e-16 90.1 348 26.1
DCAR_028159 Daucus carota HOM05D000128 ORTHO05D000059 1.3e-15 89.7 127 40.9
DCAR_000786 Daucus carota HOM05D004122 ORTHO05D004468 8.2e-15 87.0 635 22.8
DCAR_027457 Daucus carota HOM05D004122 ORTHO05D004468 9.1e-14 83.6 184 27.7
DCAR_026085 Daucus carota HOM05D004122 ORTHO05D004468 2.7e-13 82.0 560 19.6
DCAR_030263 Daucus carota HOM05D012331 ORTHO05D004468 3.5e-13 81.6 334 26.6
DCAR_017663 Daucus carota HOM05D004122 ORTHO05D004468 4.5e-13 81.3 344 25.0
DCAR_024155 Daucus carota HOM05D004122 ORTHO05D004468 1.0e-12 80.1 467 23.1
DCAR_030237 Daucus carota HOM05D004122 ORTHO05D004468 1.0e-12 80.1 137 35.0
DCAR_000259 Daucus carota HOM05D022569 ORTHO05D006345 1.7e-12 79.3 63 61.9
DCAR_018537 Daucus carota HOM05D022569 ORTHO05D006345 1.7e-12 79.3 63 61.9
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 3.8e-12 78.2 329 22.8
DCAR_005718 Daucus carota HOM05D012331 ORTHO05D004468 5.0e-12 77.8 376 24.7
DCAR_030268 Daucus carota HOM05D012331 ORTHO05D004468 5.0e-12 77.8 532 24.1
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 4.2e-11 74.7 87 44.8
DCAR_005560 Daucus carota HOM05D004122 ORTHO05D004468 1.2e-10 73.2 75 48.0
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.0e-09 70.1 360 21.4
DCAR_002845 Daucus carota HOM05D004122 ORTHO05D004468 1.0e-09 70.1 74 41.9
DCAR_010326 Daucus carota HOM05D012571 ORTHO05D004468 1.8e-09 69.3 412 20.9
DCAR_015952 Daucus carota HOM05D004122 ORTHO05D004468 2.3e-09 68.9 344 24.1
DCAR_022270 Daucus carota HOM05D004122 ORTHO05D004468 2.3e-09 68.9 422 23.2
DCAR_028632 Daucus carota HOM05D004122 ORTHO05D004468 3.0e-09 68.6 80 41.2
DCAR_029564 Daucus carota HOM05D004122 ORTHO05D004468 3.0e-09 68.6 274 25.9
DCAR_017126 Daucus carota HOM05D004122 ORTHO05D004468 4.0e-09 68.2 145 29.0
Lj5g0001897 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-09 68.2 391 24.6
Phvul.004G009401 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.0e-09 68.2 276 23.6
DCAR_024869 Daucus carota HOM05D012571 ORTHO05D004468 5.2e-09 67.8 758 21.2
DCAR_015962 Daucus carota HOM05D012331 ORTHO05D004468 6.8e-09 67.4 366 25.4
DCAR_005094 Daucus carota HOM05D012331 ORTHO05D004468 8.8e-09 67.0 630 22.9
DCAR_032229 Daucus carota HOM05D004122 ORTHO05D004468 7.5e-08 63.9 280 22.5
Lj3g0011764 Lotus japonicus HOM05D002777 ORTHO05D001516 7.5e-08 63.9 301 20.6
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.8e-08 63.5 245 24.1
Lj4g0007213 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-07 63.2 406 22.4
DCAR_009666 Daucus carota HOM05D004122 ORTHO05D004468 2.2e-07 62.4 124 31.5
Lsat_1_v5_gn_3_72241 Lactuca sativa HOM05D003915 ORTHO05D005386 4.8e-07 61.2 315 21.0
DCAR_031335 Daucus carota HOM05D004122 ORTHO05D004468 8.3e-07 60.5 164 26.2
DCAR_017177 Daucus carota HOM05D012331 ORTHO05D004468 2.4e-06 58.9 453 21.2
DCAR_010651 Daucus carota HOM05D004122 ORTHO05D004468 3.1e-06 58.5 184 26.6
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 3.1e-06 58.5 491 20.4
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 7.0e-06 57.4 197 26.4
Lj2g0000568 Lotus japonicus HOM05D002777 ORTHO05D001516 9.1e-06 57.0 429 21.0
Phvul.009G011500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.1e-06 57.0 384 20.6


User provided reference genes

Program Settings