Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017338 Daucus carota HOM05D001383 ORTHO05D000309 2.0e-70 268.9 127 100.0
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 4.1e-55 218.0 122 84.4
DCAR_029798 Daucus carota HOM05D001383 ORTHO05D000309 3.1e-50 201.8 122 76.2
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 4.9e-32 141.4 108 61.1
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 5.1e-29 131.3 108 58.3
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 1.3e-27 126.7 103 57.3
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 3.7e-27 125.2 101 57.4
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 8.4e-24 114.0 92 55.4
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 2.7e-22 109.0 96 53.1
DCAR_017237 Daucus carota HOM05D027373 ORTHO05D000309 5.5e-15 84.7 69 53.6
DCAR_010559 Daucus carota HOM05D027373 ORTHO05D000309 2.1e-14 82.8 94 44.7
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 9.7e-12 73.9 79 41.8
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 9.7e-12 73.9 79 41.8
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 5.3e-10 68.2 71 42.3
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-10 68.2 101 37.6
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.6e-09 65.9 75 44.0
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-09 65.5 104 35.6
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-09 65.5 75 44.0
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-09 65.5 104 35.6
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-09 65.5 101 36.6
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.5e-09 65.1 75 42.7
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.9e-09 64.7 75 44.0
Peaxi162Scf00215g00316 Petunia axillaris HOM05D004040 ORTHO05D000309 5.9e-09 64.7 64 43.8
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 1.3e-08 63.5 57 45.6
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 1.3e-08 63.5 57 45.6
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 1.7e-08 63.2 57 45.6
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-08 62.8 93 36.6
CAN.G1288.6 Capsicum annuum HOM05D004040 ORTHO05D000309 3.8e-08 62.0 81 33.3
DCAR_017403 Daucus carota HOM05D027571 ORTHO05D000309 3.8e-08 62.0 68 39.7
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.8e-08 62.0 71 43.7
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 6.5e-08 61.2 57 43.9
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.5e-08 61.2 98 35.7
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.5e-08 61.2 110 34.5
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.5e-08 61.2 72 37.5
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.5e-08 61.2 108 34.3
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.5e-08 61.2 110 34.5
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.5e-08 60.8 75 41.3
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.5e-08 60.8 75 41.3
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 8.5e-08 60.8 88 38.6
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 1.1e-07 60.5 68 41.2
Nitab4.5_0005772g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-07 60.5 66 40.9
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.1e-07 60.5 74 35.1
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-07 60.1 75 40.0
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-07 60.1 66 42.4
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-07 60.1 81 40.7
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-07 60.1 67 40.3
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 1.4e-07 60.1 61 41.0
CAN.G162.74 Capsicum annuum HOM05D004040 ORTHO05D000309 1.9e-07 59.7 81 34.6
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.9e-07 59.7 75 41.3
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.9e-07 59.7 85 38.8
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-07 59.7 68 36.8
arahy.Tifrunner.gnm1.ann1.DG6XDV Arachis hypogaea HOM05D029393 ORTHO05D000309 2.5e-07 59.3 105 37.1
arahy.Tifrunner.gnm1.ann1.QSEK4V Arachis hypogaea HOM05D029393 ORTHO05D000309 2.5e-07 59.3 105 37.1
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-07 59.3 60 41.7
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-07 59.3 60 41.7
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.5e-07 59.3 97 35.1
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-07 59.3 74 37.8
Manes.17G014501 Manihot esculenta HOM05D027373 ORTHO05D000309 2.5e-07 59.3 95 31.6
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 3.2e-07 58.9 58 41.4
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 3.2e-07 58.9 92 34.8
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.2e-07 58.9 76 36.8
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-07 58.9 85 36.5
Manes.17G011733 Manihot esculenta HOM05D001383 ORTHO05D000309 3.2e-07 58.9 78 35.9
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 3.2e-07 58.9 79 35.4
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-07 58.5 75 40.0
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-07 58.5 79 34.2
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-07 58.5 79 34.2
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.2e-07 58.5 74 33.8
CAN.G200.12 Capsicum annuum HOM05D004040 ORTHO05D000309 5.5e-07 58.2 68 36.8
DCAR_000258 Daucus carota HOM05D027571 ORTHO05D000309 5.5e-07 58.2 68 38.2
DCAR_018536 Daucus carota HOM05D027571 ORTHO05D000309 5.5e-07 58.2 68 38.2
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.5e-07 58.2 76 39.5
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-07 58.2 58 43.1
Nitab4.5_0000165g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.5e-07 58.2 85 40.0
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 5.5e-07 58.2 92 37.0
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-07 57.8 90 35.6
Nitab4.5_0000590g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.2e-07 57.8 86 39.5
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 7.2e-07 57.8 52 50.0
Psat3g069680 Pisum sativum HOM05D018012 ORTHO05D000309 7.2e-07 57.8 78 34.6
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 9.4e-07 57.4 97 34.0
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 9.4e-07 57.4 84 33.3
Lsat_1_v5_gn_3_4400 Lactuca sativa HOM05D001383 ORTHO05D000309 9.4e-07 57.4 66 45.5
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 9.4e-07 57.4 81 34.6
Nitab4.5_0001370g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.4e-07 57.4 58 39.7
Nitab4.5_0022073g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.4e-07 57.4 69 37.7
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 9.4e-07 57.4 84 33.3
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 9.4e-07 57.4 87 36.8
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 1.2e-06 57.0 87 33.3
Nitab4.5_0009037g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-06 57.0 69 37.7
Peaxi162Scf00039g00218 Petunia axillaris HOM05D022774 ORTHO05D000309 1.2e-06 57.0 60 40.0
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 1.6e-06 56.6 60 43.3
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 56.6 70 34.3
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 56.6 70 34.3
Peaxi162Scf00050g02421 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 56.6 58 46.6
Peaxi162Scf00070g00024 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 56.6 58 46.6
Peaxi162Scf00099g01610 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 56.6 58 46.6
Peaxi162Scf00100g00020 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 56.6 58 46.6
Peaxi162Scf00594g00013 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 56.6 58 46.6
Peaxi162Scf01303g00011 Petunia axillaris HOM05D004040 ORTHO05D000309 1.6e-06 56.6 58 46.6
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 56.6 83 37.3
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 2.1e-06 56.2 67 37.3
Nitab4.5_0010359g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.2 69 37.7
Oeu001038.1 Olea europaea HOM05D001383 ORTHO05D000309 2.1e-06 56.2 75 34.7
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 2.1e-06 56.2 75 36.0
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 66 39.4
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 2.7e-06 55.8 52 48.1
Prupe.8G073400 Prunus persica HOM05D001383 ORTHO05D000309 2.7e-06 55.8 61 37.7
COL.COLO4_35283 Corchorus olitorius HOM05D023691 ORTHO05D000309 3.6e-06 55.5 74 33.8
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.6e-06 55.5 71 38.0
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.6e-06 55.5 96 34.4
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 3.6e-06 55.5 86 36.0
SGA_v2.0_scaffold79G25662 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.5 66 36.4
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.7e-06 55.1 73 34.2
Peaxi162Scf00043g00065 Petunia axillaris HOM05D004040 ORTHO05D000309 4.7e-06 55.1 67 38.8
Peaxi162Scf00274g00613 Petunia axillaris HOM05D004040 ORTHO05D000309 4.7e-06 55.1 67 38.8
Peaxi162Scf00677g00029 Petunia axillaris HOM05D004040 ORTHO05D000309 4.7e-06 55.1 67 38.8
CAN.G298.38 Capsicum annuum HOM05D004040 ORTHO05D000309 6.1e-06 54.7 59 37.3
Eucgr.L01275 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.1e-06 54.7 73 34.2
Nitab4.5_0000006g0600 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.1e-06 54.7 55 45.5
Nitab4.5_0006105g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.1e-06 54.7 58 39.7
Peaxi162Scf00090g00816 Petunia axillaris HOM05D004040 ORTHO05D000309 6.1e-06 54.7 52 48.1
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 6.1e-06 54.7 78 32.1
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 6.1e-06 54.7 55 41.8
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 6.1e-06 54.7 55 41.8
SalBow8G1086 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-06 54.3 85 41.2
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 7.9e-06 54.3 66 37.9


User provided reference genes

Program Settings