Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 5.3e-62 240.7 112 100.0
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.7e-28 129.4 133 51.9
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 7.4e-24 114.0 135 43.7
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 8.2e-23 110.5 135 43.0
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 3.1e-22 108.6 135 43.7
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 7.0e-22 107.5 138 42.0
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.2e-21 106.7 134 42.5
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.2e-21 106.7 135 41.5
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.2e-21 106.7 135 41.5
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.2e-21 106.7 135 40.0
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.6e-21 106.3 137 41.6
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 1.6e-21 106.3 137 41.6
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.6e-21 105.5 135 43.0
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 3.5e-21 105.1 131 40.5
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 4.5e-21 104.8 135 43.7
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 5.9e-21 104.4 137 40.9
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 7.7e-21 104.0 135 41.5
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 7.7e-21 104.0 135 43.7
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.0e-20 103.6 135 39.3
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.0e-20 103.6 135 41.5
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.3e-20 103.2 136 41.9
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.3e-20 103.2 134 44.0
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.7e-20 102.8 135 40.0
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 2.9e-20 102.1 135 40.7
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 2.9e-20 102.1 134 40.3
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 5.0e-20 101.3 135 40.0
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 5.0e-20 101.3 135 40.0
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 5.0e-20 101.3 135 42.2
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 5.0e-20 101.3 138 39.1
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 6.5e-20 100.9 135 43.0
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 6.5e-20 100.9 135 41.5
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 6.5e-20 100.9 133 41.4
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 8.5e-20 100.5 135 40.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 8.5e-20 100.5 135 42.2
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-19 100.1 137 38.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-19 100.1 137 38.7
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.1e-19 100.1 135 41.5
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.5e-19 99.8 132 40.2
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 1.5e-19 99.8 135 40.0
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 1.9e-19 99.4 139 40.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 1.9e-19 99.4 112 46.4
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 2.5e-19 99.0 135 39.3
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 2.5e-19 99.0 133 42.1
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 3.2e-19 98.6 133 42.1
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 3.2e-19 98.6 151 37.1
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 4.2e-19 98.2 136 40.4
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 4.2e-19 98.2 136 41.9
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.2e-18 96.7 135 38.5
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 2.1e-18 95.9 135 39.3
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 2.1e-18 95.9 133 40.6
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.1e-18 95.9 133 40.6
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.7e-18 95.5 133 41.4
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.6e-18 95.1 136 39.0
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 6.1e-18 94.4 130 41.5
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 8.0e-18 94.0 133 42.9
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 8.0e-18 94.0 130 38.5
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 1.0e-17 93.6 136 39.7
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.4e-17 93.2 134 38.8
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.8e-17 92.8 136 39.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.0e-17 92.0 132 37.9
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.0e-17 92.0 126 41.3
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 5.2e-17 91.3 135 37.0
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 6.7e-17 90.9 136 39.0
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 6.7e-17 90.9 136 39.0
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 8.8e-17 90.5 151 34.4
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 1.5e-16 89.7 115 41.7
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 2.6e-16 89.0 136 39.7
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 9.7e-16 87.0 136 36.0
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.3e-15 86.7 135 35.6
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.7e-15 86.3 132 34.8
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 2.8e-15 85.5 135 37.8
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.8e-15 85.5 136 35.3
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.8e-15 85.5 136 35.3
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.8e-15 85.5 136 35.3
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 6.3e-15 84.3 134 36.6
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.4e-14 83.2 111 41.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.4e-14 83.2 133 36.8
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 5.3e-14 81.3 133 34.6
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 7.0e-14 80.9 131 33.6
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 9.1e-14 80.5 115 35.7
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 3.5e-13 78.6 136 36.0
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 5.9e-13 77.8 69 52.2
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.7e-12 76.3 68 54.4
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.6e-10 69.7 115 36.5
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.2e-08 63.5 114 38.6
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 5.7e-08 61.2 96 38.5
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 5.7e-08 61.2 114 35.1
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.7e-07 59.7 119 31.1
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 2.2e-07 59.3 119 35.3
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 2.8e-07 58.9 115 33.0
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.8e-06 56.2 56 39.3
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 5.4e-06 54.7 50 50.0


User provided reference genes

Program Settings