Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017273 Daucus carota HOM05D011721 ORTHO05D013592 6.7e-248 860.1 410 100.0
DCAR_031495 Daucus carota HOM05D011721 ORTHO05D013592 6.9e-152 541.2 423 64.8
DCAR_023735 Daucus carota HOM05D011721 ORTHO05D013592 1.7e-150 536.6 423 64.3
DCAR_028487 Daucus carota HOM05D011721 ORTHO05D013592 1.7e-150 536.6 423 63.8
DCAR_017394 Daucus carota HOM05D011721 ORTHO05D013592 2.2e-150 536.2 423 65.0
DCAR_028155 Daucus carota HOM05D011721 ORTHO05D013592 3.8e-150 535.4 423 64.5
DCAR_031486 Daucus carota HOM05D011721 ORTHO05D013592 1.2e-132 477.2 521 51.1
DCAR_017844 Daucus carota HOM05D011721 ORTHO05D013592 4.7e-132 475.3 420 58.3
DCAR_000926 Daucus carota HOM05D011721 ORTHO05D013592 7.4e-130 468.0 375 61.9
DCAR_004177 Daucus carota HOM05D011721 ORTHO05D013592 2.7e-124 449.5 369 62.3
DCAR_025269 Daucus carota HOM05D011721 ORTHO05D013592 1.4e-123 447.2 228 94.7
DCAR_021122 Daucus carota HOM05D011721 ORTHO05D013592 5.4e-72 275.8 261 59.0
DCAR_010969 Daucus carota HOM05D011721 ORTHO05D013592 2.1e-52 210.7 105 98.1
DCAR_021121 Daucus carota HOM05D011721 ORTHO05D013592 1.4e-40 171.4 124 70.2
DCAR_008891 Daucus carota HOM05D000124 ORTHO05D013592 2.1e-36 157.5 80 96.2
DCAR_028482 Daucus carota HOM05D011721 ORTHO05D013592 7.6e-34 149.1 142 58.5
DCAR_017306 Daucus carota HOM05D011721 ORTHO05D013592 5.0e-17 93.2 180 42.8
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 1.2e-10 72.0 166 31.9
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.9e-09 67.4 166 30.7
arahy.Tifrunner.gnm1.ann1.M3TN6X Arachis hypogaea HOM05D000176 ORTHO05D000106 5.0e-09 66.6 139 30.2
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.0e-09 66.6 166 30.7
Migut.B01020 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.5e-09 66.2 215 29.3
DCAR_030358 Daucus carota HOM05D000176 ORTHO05D000106 1.1e-08 65.5 198 29.3
arahy.Tifrunner.gnm1.ann1.UGFV7M Arachis hypogaea HOM05D000176 ORTHO05D000106 2.5e-08 64.3 139 29.5
arahy.Tifrunner.gnm1.ann1.71UM9A Arachis hypogaea HOM05D000176 ORTHO05D000106 4.2e-08 63.5 130 30.8
Lalb_Chr01g0015401 Lupinus albus HOM05D000176 ORTHO05D000106 5.5e-08 63.2 135 34.8
TWI38G1670 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.2e-08 62.8 140 32.1
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 9.4e-08 62.4 163 29.4
Cc10_g12350 Coffea canephora HOM05D000176 ORTHO05D000106 9.4e-08 62.4 153 29.4
Sed0015346 Sechium edule HOM05D000176 ORTHO05D000106 9.4e-08 62.4 133 31.6
TWI79G1140 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 9.4e-08 62.4 144 31.2
arahy.Tifrunner.gnm1.ann1.7K8IWY Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-07 62.0 137 30.7
arahy.Tifrunner.gnm1.ann1.X9EH9C Arachis hypogaea HOM05D000176 ORTHO05D000106 2.1e-07 61.2 131 29.8
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.6e-07 60.5 163 33.7
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.6e-07 60.5 187 31.0
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.6e-07 60.5 162 32.7
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.6e-07 60.5 137 30.7
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.7e-07 60.1 163 33.7
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.1e-07 59.7 163 33.7
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.1e-07 59.7 163 33.7
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.1e-07 59.7 163 33.7
arahy.Tifrunner.gnm1.ann1.N6NQQH Arachis hypogaea HOM05D000176 ORTHO05D000106 8.0e-07 59.3 134 32.8
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.0e-07 59.3 163 32.5
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.0e-07 59.3 139 30.2
Sopen12g022270 Solanum pennellii HOM05D000006 ORTHO05D000001 8.0e-07 59.3 141 32.6
TWI31G0719 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 8.0e-07 59.3 144 30.6
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 1.0e-06 58.9 141 30.5
CSS0021846 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.8e-06 58.2 176 27.8
CSS0044124 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-06 57.8 162 29.0
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 2.3e-06 57.8 195 29.2
ECA233G5665 Erigeron canadensis HOM05D000176 ORTHO05D000106 4.0e-06 57.0 182 28.6
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.0e-06 57.0 134 30.6
CSS0045961 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.7e-06 56.2 196 28.6
RhsimUnG0046100 Rhododendron simsii HOM05D000176 ORTHO05D000106 6.7e-06 56.2 136 27.9
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 6.7e-06 56.2 140 29.3
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 6.7e-06 56.2 143 28.7
arahy.Tifrunner.gnm1.ann1.42UER3 Arachis hypogaea HOM05D000176 ORTHO05D000106 8.8e-06 55.8 129 28.7
arahy.Tifrunner.gnm1.ann1.594H2I Arachis hypogaea HOM05D000176 ORTHO05D000106 8.8e-06 55.8 98 32.7


User provided reference genes

Program Settings