Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017237 Daucus carota HOM05D027373 ORTHO05D000309 3.4e-69 265.0 144 100.0
DCAR_010559 Daucus carota HOM05D027373 ORTHO05D000309 8.3e-60 233.8 140 89.3
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-18 96.7 139 40.3
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 2.7e-18 95.9 151 39.1
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 1.0e-17 94.0 140 38.6
DCAR_001589 Daucus carota HOM05D027373 ORTHO05D000309 2.3e-17 92.8 46 91.3
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 3.0e-17 92.4 91 50.5
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 8.7e-17 90.9 137 40.1
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 4.3e-16 88.6 128 41.4
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 5.6e-16 88.2 69 55.1
DCAR_029798 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-15 87.0 69 52.2
DCAR_017338 Daucus carota HOM05D001383 ORTHO05D000309 2.1e-15 86.3 69 53.6
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 6.0e-10 68.2 129 32.6
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 2.3e-09 66.2 66 43.9
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 5.1e-09 65.1 93 36.6
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 6.7e-09 64.7 76 36.8
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.7e-09 64.3 74 44.6
Manes.17G014501 Manihot esculenta HOM05D027373 ORTHO05D000309 1.5e-08 63.5 75 42.7
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-08 62.8 86 43.0
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-08 62.4 86 41.9
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-08 62.4 84 35.7
HanXRQChr04g0101711 Helianthus annuus HOM05D001383 ORTHO05D000309 4.3e-08 62.0 106 31.1
Nitab4.5_0009037g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-08 61.6 77 40.3
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 9.6e-08 60.8 67 38.8
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.6e-08 60.8 77 42.9
Nitab4.5_0010359g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.6e-08 60.8 84 38.1
Nitab4.5_0022073g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.6e-08 60.8 84 38.1
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-07 60.5 122 31.1
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-07 60.5 69 42.0
Nitab4.5_0006171g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.3e-07 60.5 59 42.4
Oeu001038.1 Olea europaea HOM05D001383 ORTHO05D000309 1.3e-07 60.5 71 42.3
Oeu043155.1 Olea europaea HOM05D001383 ORTHO05D000309 1.3e-07 60.5 68 41.2
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 1.6e-07 60.1 66 42.4
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 1.6e-07 60.1 58 43.1
HanXRQChr02g0055571 Helianthus annuus HOM05D001383 ORTHO05D000309 1.6e-07 60.1 106 31.1
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.6e-07 60.1 73 41.1
DCAR_028616 Daucus carota HOM05D001383 ORTHO05D000309 2.1e-07 59.7 83 38.6
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-07 59.7 69 43.5
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-07 59.7 66 43.9
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-07 59.7 66 43.9
Nitab4.5_0000420g0050 Nicotiana tabacum HOM05D010082 ORTHO05D002184 2.1e-07 59.7 85 37.6
Nitab4.5_0005967g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-07 59.7 120 31.7
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.1e-07 59.7 68 35.3
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 2.8e-07 59.3 64 43.8
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 2.8e-07 59.3 64 43.8
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.7e-07 58.9 68 39.7
Lsat_1_v5_gn_2_16641 Lactuca sativa HOM05D009585 ORTHO05D000309 3.7e-07 58.9 49 51.0
DCAR_026902 Daucus carota HOM05D001383 ORTHO05D000309 4.8e-07 58.5 83 38.6
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.8e-07 58.5 68 39.7
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.8e-07 58.5 71 40.8
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-07 58.2 69 42.0
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-07 58.2 84 34.5
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-07 58.2 66 39.4
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.2e-07 58.2 71 40.8
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.2e-07 58.2 71 40.8
Oeu045500.1 Olea europaea HOM05D001383 ORTHO05D000309 6.2e-07 58.2 86 38.4
Prupe.8G073400 Prunus persica HOM05D001383 ORTHO05D000309 6.2e-07 58.2 59 44.1
DCAR_017403 Daucus carota HOM05D027571 ORTHO05D000309 8.1e-07 57.8 80 38.8
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.1e-07 57.8 118 33.9
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.1e-07 57.8 71 40.8
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 8.1e-07 57.8 126 34.1
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-06 57.4 71 39.4
Peaxi162Scf00322g00085 Petunia axillaris HOM05D001883 ORTHO05D002184 1.1e-06 57.4 127 30.7
SGA_v2.0_scaffold54G19529 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-06 57.4 78 39.7
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.1e-06 57.4 70 38.6
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 1.4e-06 57.0 52 50.0
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 1.4e-06 57.0 52 50.0
Oeu031331.1 Olea europaea HOM05D001383 ORTHO05D000309 1.4e-06 57.0 71 38.0
PGSC0003DMG400043513 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-06 57.0 126 33.3
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.4e-06 57.0 70 40.0
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-06 56.6 69 40.6
Lsat_1_v5_gn_0_6841 Lactuca sativa HOM05D001383 ORTHO05D000309 1.8e-06 56.6 69 40.6
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 71 33.8
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 71 33.8
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 1.8e-06 56.6 69 42.0
SGA_v2.0_scaffold102G29873 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-06 56.6 55 41.8
SGA_v2.0_scaffold102G29875 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-06 56.6 55 41.8
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 2.4e-06 56.2 80 36.2
Nitab4.5_0003930g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.4e-06 56.2 57 40.4
Peaxi162Scf00034g00159 Petunia axillaris HOM05D001883 ORTHO05D002184 2.4e-06 56.2 82 36.6
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 56.2 64 39.1
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 56.2 64 39.1
SGA_v2.0_scaffold10G05216 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 117 31.6
SGA_v2.0_scaffold13G06336 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 117 31.6
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 77 37.7
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 71 35.2
SGA_v2.0_scaffold2426G54118 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 71 40.8
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 71 35.2
SGA_v2.0_scaffold79G25662 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.2 78 39.7
DCAR_014868 Daucus carota HOM05D001383 ORTHO05D000309 3.1e-06 55.8 57 45.6
ECA238G1462 Erigeron canadensis HOM05D012511 ORTHO05D013076 3.1e-06 55.8 60 40.0
HanXRQChr03g0077471 Helianthus annuus HOM05D001383 ORTHO05D000309 3.1e-06 55.8 116 31.0
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.1e-06 55.8 63 41.3
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.1e-06 55.8 63 41.3
Peaxi162Scf00034g00158 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-06 55.8 121 30.6
Peaxi162Scf00147g01910 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.8 64 39.1
Peaxi162Scf00434g00729 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-06 55.8 121 30.6
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 4.0e-06 55.5 129 31.8
Lsat_1_v5_gn_2_119760 Lactuca sativa HOM05D001383 ORTHO05D000309 4.0e-06 55.5 70 40.0
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 4.0e-06 55.5 66 36.4
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 4.0e-06 55.5 66 34.8
Nitab4.5_0004703g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.0e-06 55.5 53 37.7
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.0e-06 55.5 71 39.4
Oeu026062.1 Olea europaea HOM05D001383 ORTHO05D000309 4.0e-06 55.5 72 37.5
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 4.0e-06 55.5 71 39.4
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 4.0e-06 55.5 58 37.9
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 5.3e-06 55.1 73 38.4
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-06 55.1 59 40.7
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-06 55.1 59 40.7
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-06 55.1 59 40.7
Nitab4.5_0001031g0210 Nicotiana tabacum HOM05D002252 ORTHO05D002184 5.3e-06 55.1 70 37.1
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 5.3e-06 55.1 86 38.4
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.1 60 40.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.1 64 35.9
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 5.3e-06 55.1 58 37.9
SGA_v2.0_scaffold10G05311 Striga asiatica HOM05D001383 ORTHO05D000309 5.3e-06 55.1 68 35.3
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 5.3e-06 55.1 54 40.7
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 6.9e-06 54.7 62 43.5
DCAR_029935 Daucus carota HOM05D001383 ORTHO05D000309 6.9e-06 54.7 119 30.3
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.9e-06 54.7 72 40.3
Lsat_1_v5_gn_4_141301 Lactuca sativa HOM05D001383 ORTHO05D000309 6.9e-06 54.7 55 41.8
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.7 59 44.1
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.7 52 44.2
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.7 59 40.7
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.7 59 40.7
Nitab4.5_0000078g0310 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.9e-06 54.7 42 50.0
Peaxi162Scf00005g04013 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 6.9e-06 54.7 72 34.7
Peaxi162Scf00248g00115 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf00344g00410 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf00360g00012 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf00395g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf00805g00517 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 79 36.7
Peaxi162Scf00916g00123 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf00966g00117 Petunia axillaris HOM05D001883 ORTHO05D002184 6.9e-06 54.7 127 29.9
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 6.9e-06 54.7 62 38.7
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.0e-06 54.3 57 38.6
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.0e-06 54.3 57 40.4
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-06 54.3 69 36.2
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-06 54.3 59 40.7
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.0e-06 54.3 59 40.7
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 9.0e-06 54.3 70 37.1
Nitab4.5_0000006g0600 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.0e-06 54.3 58 41.4
Nitab4.5_0000590g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.0e-06 54.3 73 38.4
Peaxi162Scf00003g00007 Petunia axillaris HOM05D001883 ORTHO05D002184 9.0e-06 54.3 121 31.4
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 9.0e-06 54.3 75 32.0
Peaxi162Scf00538g00714 Petunia axillaris HOM05D001883 ORTHO05D002184 9.0e-06 54.3 64 37.5
Peaxi162Scf00543g00417 Petunia axillaris HOM05D001883 ORTHO05D002184 9.0e-06 54.3 127 29.1
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 9.0e-06 54.3 69 36.2
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 9.0e-06 54.3 124 29.0
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 9.0e-06 54.3 66 36.4
Solyc12g150117.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 9.0e-06 54.3 70 40.0
Sopen04g015170 Solanum pennellii HOM05D008741 ORTHO05D010787 9.0e-06 54.3 63 46.0
PGSC0003DMG400023197 Solanum tuberosum HOM05D008741 ORTHO05D010787 9.0e-06 54.3 66 37.9


User provided reference genes

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