Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 2.5e-248 861.7 452 100.0
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 9.8e-83 311.6 428 46.0
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.3e-82 311.2 435 45.7
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.2e-80 304.7 441 45.4
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 3.6e-77 293.1 444 45.5
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 3.4e-75 286.6 436 43.6
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 6.4e-74 282.3 410 46.1
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.9e-73 280.8 411 45.3
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.6e-72 277.7 446 43.9
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.5e-72 276.6 448 42.2
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.7e-71 274.2 408 44.1
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.9e-71 273.1 390 45.6
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 9.5e-70 268.5 435 44.4
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 4.7e-69 266.2 535 37.8
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.1e-68 265.0 447 42.1
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 6.8e-68 262.3 417 42.9
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 2.0e-67 260.8 424 43.6
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.2e-66 257.3 427 42.6
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 1.4e-65 254.6 445 39.6
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 5.4e-65 252.7 408 43.4
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 2.7e-64 250.4 449 41.4
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 3.5e-64 250.0 452 38.7
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.9e-62 244.2 432 40.5
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 9.5e-62 241.9 449 40.3
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 2.1e-61 240.7 436 40.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 6.2e-61 239.2 458 38.0
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 6.2e-61 239.2 426 40.1
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 1.8e-60 237.7 448 41.7
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 1.8e-60 237.7 451 39.2
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 2.4e-60 237.3 425 41.2
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 5.2e-60 236.1 430 38.8
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.2e-59 235.0 430 38.4
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.5e-59 234.6 425 41.2
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.5e-59 234.6 462 39.4
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.6e-59 233.8 435 38.9
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 3.4e-59 233.4 435 38.4
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.4e-59 233.0 425 40.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.3e-58 231.5 445 38.0
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 1.7e-58 231.1 446 39.5
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 7.1e-57 225.7 442 40.3
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 9.2e-57 225.3 458 38.9
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.7e-56 223.8 438 39.7
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.0e-55 221.9 370 42.2
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 3.9e-55 219.9 438 37.2
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 5.6e-54 216.1 426 37.1
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 9.6e-54 215.3 442 38.2
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.3e-53 214.9 442 38.0
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.6e-53 214.5 461 37.7
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 2.1e-53 214.2 424 38.4
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 3.6e-53 213.4 453 36.9
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 4.8e-53 213.0 434 39.2
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 6.2e-53 212.6 445 37.1
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.1e-52 211.8 407 40.0
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.8e-52 211.1 428 38.1
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 5.3e-52 209.5 406 39.4
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.4e-51 206.8 407 39.6
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.2e-50 204.1 477 35.0
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 6.4e-50 202.6 469 34.1
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 6.4e-50 202.6 439 35.8
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 1.4e-49 201.4 468 35.5
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 7.1e-49 199.1 429 34.7
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 8.7e-47 192.2 424 34.7
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.9e-46 191.0 438 35.6
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 2.5e-46 190.7 304 41.1
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 7.3e-46 189.1 397 35.5
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.1e-45 187.6 458 34.5
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 8.1e-45 185.7 396 35.1
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 9.0e-44 182.2 419 36.0
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.2e-43 181.8 401 36.2
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 2.7e-40 170.6 566 29.9
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 2.6e-35 154.1 291 39.5
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 3.4e-35 153.7 222 46.4
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.5e-35 153.3 287 38.0
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 7.6e-35 152.5 154 53.2
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.0e-34 152.1 457 29.3
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.6e-32 144.8 336 32.7
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 3.5e-32 143.7 276 37.0
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 6.0e-32 142.9 429 31.2
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 2.3e-31 141.0 343 30.9
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 5.1e-31 139.8 195 46.2
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 6.2e-29 132.9 549 29.0
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 2.4e-28 131.0 255 35.7
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.2e-26 124.4 261 40.2
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 3.8e-26 123.6 153 45.1
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 9.3e-25 119.0 260 37.3
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.2e-24 118.6 198 43.9
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 2.5e-22 110.9 270 34.1
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 4.3e-22 110.2 452 28.8
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.9e-18 97.4 195 35.9
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 7.2e-17 92.8 431 26.7
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 3.0e-15 87.4 115 40.9
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.3e-13 82.0 137 35.8
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 2.6e-11 74.3 97 44.3
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.9e-09 68.2 199 26.6
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 9.4e-09 65.9 119 35.3
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 3.9e-07 60.5 184 30.4


User provided reference genes

Program Settings