Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 1.7e-45 185.7 94 100.0
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 5.8e-38 160.6 94 79.8
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 7.6e-38 160.2 94 79.8
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.7e-37 159.1 94 83.0
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 3.8e-37 157.9 94 77.7
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 8.4e-37 156.8 94 81.9
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.4e-36 156.0 90 82.2
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.4e-36 156.0 92 80.4
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 2.4e-36 155.2 94 77.7
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 2.4e-36 155.2 92 79.3
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 79.8
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 77.7
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 77.7
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 78.7
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.2e-36 154.8 90 82.2
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 4.2e-36 154.5 90 81.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 9.3e-36 153.3 94 79.8
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 1.2e-35 152.9 94 78.7
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.2e-35 152.9 90 80.0
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 2.7e-35 151.8 94 76.6
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 2.7e-35 151.8 94 76.6
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.7e-35 151.8 90 80.0
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.5e-35 151.4 86 83.7
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 3.5e-35 151.4 93 76.3
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.5e-35 151.4 93 76.3
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.5e-35 151.4 93 76.3
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 7.9e-35 150.2 92 80.4
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.3e-34 149.4 91 79.1
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.3e-34 149.4 86 82.6
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 75.5
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 1.8e-34 149.1 90 77.8
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 2.3e-34 148.7 89 78.7
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 3.0e-34 148.3 94 75.5
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 3.0e-34 148.3 89 78.7
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.0e-34 148.3 86 82.6
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 3.0e-34 148.3 92 76.1
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 3.0e-34 148.3 92 77.2
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 3.9e-34 147.9 90 76.7
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 5.1e-34 147.5 88 79.5
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 5.1e-34 147.5 93 75.3
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 5.1e-34 147.5 90 75.6
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 6.7e-34 147.1 88 78.4
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 8.7e-34 146.7 92 77.2
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 8.7e-34 146.7 94 75.5
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.1e-33 146.4 89 77.5
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.1e-33 146.4 90 77.8
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.1e-33 146.4 88 79.5
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 2.5e-33 145.2 88 78.4
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.3e-33 144.8 90 75.6
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 77.3
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 76.1
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 4.3e-33 144.4 90 74.4
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 5.6e-33 144.1 84 82.1
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 7.4e-33 143.7 87 77.0
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 7.4e-33 143.7 88 77.3
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.3e-32 142.9 91 74.7
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.3e-32 142.9 88 75.0
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-32 142.9 104 68.3
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.3e-32 142.9 92 72.8
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.3e-32 142.9 81 82.7
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.6e-32 142.5 91 73.6
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.6e-32 142.5 90 74.4
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.8e-32 141.7 91 73.6
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 3.7e-32 141.4 91 73.6
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 6.2e-32 140.6 88 76.1
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 6.2e-32 140.6 87 75.9
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 8.1e-32 140.2 91 72.5
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 8.1e-32 140.2 91 72.5
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.1e-31 139.8 91 72.5
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.1e-31 139.8 91 72.5
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.1e-31 139.8 91 72.5
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 1.1e-31 139.8 91 72.5
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 1.1e-31 139.8 88 73.9
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.4e-31 139.4 89 71.9
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.8e-31 139.0 84 78.6
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 3.1e-31 138.3 88 73.9
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 3.1e-31 138.3 88 73.9
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 3.1e-31 138.3 90 74.4
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 5.3e-31 137.5 94 69.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.3e-31 137.5 105 64.8
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.5e-30 136.0 88 71.6
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 3.4e-30 134.8 88 71.6
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 2.5e-28 128.6 124 55.6
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 2.7e-27 125.2 78 75.6
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 7.9e-27 123.6 74 77.0
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 3.0e-26 121.7 69 81.2
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 6.7e-26 120.6 141 48.2
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 1.1e-25 119.8 82 70.7
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 1.1e-25 119.8 82 70.7
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.1e-25 119.8 71 80.3
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.5e-25 118.6 68 80.9
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 5.6e-25 117.5 71 77.5
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.8e-24 114.4 75 69.3
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 8.2e-24 113.6 67 80.6
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 1.8e-23 112.5 82 61.0
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.8e-23 112.5 66 80.3
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 2.4e-23 112.1 67 77.6
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 4.0e-23 111.3 69 72.5
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 5.3e-23 110.9 68 72.1
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.5e-22 109.4 65 78.5
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 3.4e-22 108.2 84 60.7
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 5.8e-22 107.5 69 68.1
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.0e-21 106.7 69 71.0
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.9e-20 102.4 65 67.7
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.6e-19 99.4 77 59.7
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 4.3e-17 91.3 65 58.5
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 5.3e-15 84.3 67 64.2
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 5.0e-13 77.8 45 73.3
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 8.5e-13 77.0 90 52.2
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 7.9e-11 70.5 70 47.1
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 5.1e-10 67.8 78 42.3


User provided reference genes

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