Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 3.4e-258 894.4 435 100.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 4.2e-200 701.4 411 80.5
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 4.8e-196 688.0 413 76.8
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 7.0e-195 684.1 413 77.7
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.7e-194 682.2 413 76.0
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 5.9e-194 681.0 413 75.8
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.3e-193 679.1 412 76.5
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.8e-193 678.3 407 76.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 8.6e-193 677.2 413 75.3
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 4.2e-192 674.9 403 78.9
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.5e-192 674.5 403 78.7
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 6.1e-191 671.0 419 75.4
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.4e-190 669.8 414 74.6
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.4e-190 669.8 403 75.9
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.2e-189 666.8 413 73.6
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.2e-189 666.8 413 74.6
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.5e-189 666.4 411 74.7
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 5.7e-189 664.5 410 74.6
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 7.5e-189 664.1 412 73.8
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.3e-188 663.3 424 73.8
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.7e-188 662.9 410 72.7
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 2.2e-188 662.5 413 75.3
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 2.8e-188 662.1 408 74.3
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 6.3e-188 661.0 412 74.0
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 8.3e-188 660.6 410 73.4
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 8.3e-188 660.6 411 73.7
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 3.1e-187 658.7 414 75.8
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.1e-187 658.7 406 74.9
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.4e-187 657.9 421 72.4
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 9.2e-187 657.1 413 73.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.7e-186 655.6 413 73.8
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 4.5e-186 654.8 407 74.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 5.9e-186 654.4 411 71.3
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.7e-185 652.9 412 73.5
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 3.8e-185 651.7 438 71.7
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.1e-184 650.2 409 72.6
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 3.3e-184 648.7 413 72.4
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 5.6e-184 647.9 407 71.7
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 4.7e-183 644.8 417 70.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.0e-183 644.0 426 70.0
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.8e-182 642.9 407 71.5
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 3.1e-182 642.1 407 71.3
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.1e-182 642.1 411 71.8
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 8.9e-182 640.6 407 71.3
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.2e-181 640.2 407 71.0
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.2e-181 640.2 414 71.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.2e-181 640.2 407 70.8
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 2.0e-181 639.4 403 73.4
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.6e-181 639.0 393 72.8
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.6e-181 639.0 413 74.1
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 3.4e-181 638.6 410 71.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.3e-180 636.7 405 71.6
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.3e-180 636.7 407 70.8
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.7e-180 636.3 411 71.3
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 6.4e-180 634.4 406 70.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 6.4e-180 634.4 410 71.0
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 8.3e-180 634.0 407 70.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.1e-179 633.6 407 70.0
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.1e-179 633.6 411 71.0
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 2.4e-179 632.5 413 71.2
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 4.1e-179 631.7 407 69.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 9.2e-179 630.6 407 69.8
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 9.2e-179 630.6 411 71.0
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.6e-178 629.8 406 70.2
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.7e-178 629.0 412 67.7
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.5e-178 628.6 403 74.7
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.0e-177 627.1 397 71.5
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.7e-177 626.3 406 69.2
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 5.0e-177 624.8 412 69.4
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.5e-176 623.2 407 69.5
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 4.3e-176 621.7 422 69.2
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 7.3e-176 620.9 410 70.7
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 3.1e-174 615.5 390 72.8
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 4.0e-174 615.1 410 70.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 4.9e-172 608.2 412 68.0
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 6.4e-172 607.8 547 55.9
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 8.3e-172 607.4 410 68.8
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.1e-171 607.1 410 68.3
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.4e-171 604.7 417 68.1
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.6e-168 594.7 460 65.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.8e-166 589.7 422 64.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.7e-161 573.2 452 60.8
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 8.6e-161 570.9 412 65.3
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.5e-160 570.1 400 66.0
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 3.3e-160 568.9 395 65.6
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 5.1e-153 545.0 374 67.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.1e-150 537.3 401 62.6
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.4e-150 536.2 392 62.8
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 4.6e-146 521.9 402 62.4
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 2.5e-144 516.2 366 65.8
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 6.4e-140 501.5 301 75.1
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.0e-137 494.2 302 74.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 5.1e-137 491.9 377 64.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.9e-120 436.8 412 55.3
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.7e-95 354.0 346 44.8
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.4e-94 350.9 207 77.8
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 3.1e-86 323.2 203 72.9
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 2.7e-85 320.1 366 42.3
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 6.5e-84 315.5 193 76.7
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 6.8e-81 305.4 357 41.5
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.2e-71 273.9 347 36.6
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 2.1e-58 230.7 280 38.2
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.4e-46 190.7 106 80.2
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.9e-39 167.2 103 71.8
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 3.5e-37 160.2 104 69.2
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 3.5e-37 160.2 104 69.2
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.0e-36 158.7 85 81.2
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.3e-36 158.3 103 68.9
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 3.9e-28 130.2 139 52.5
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.1e-12 76.6 48 66.7
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.5e-11 74.3 49 63.3
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.3e-11 73.9 48 64.6
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 3.7e-10 70.5 56 57.1
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.6e-08 64.3 47 57.4
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 5.9e-08 63.2 45 64.4


User provided reference genes

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