Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 1.6e-101 372.9 205 100.0
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 8.8e-23 111.3 217 46.5
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 8.8e-23 111.3 218 37.2
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 1.1e-20 104.4 204 43.6
DCAR_013118 Daucus carota HOM05D007784 ORTHO05D008654 3.8e-18 95.9 94 54.3
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 8.6e-18 94.7 220 40.5
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 8.6e-18 94.7 220 40.0
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 8.6e-18 94.7 220 40.0
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 2.5e-17 93.2 212 41.0
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 2.5e-17 93.2 208 44.7
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 9.5e-17 91.3 227 36.1
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 2.1e-16 90.1 215 38.6
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 8.0e-16 88.2 208 40.4
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 2.3e-15 86.7 189 42.3
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 2.0e-14 83.6 203 42.9
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 3.4e-14 82.8 207 38.2
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 3.4e-14 82.8 219 40.2
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 4.4e-14 82.4 228 31.6
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 1.3e-13 80.9 189 40.7
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 2.2e-13 80.1 220 37.3
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 6.3e-13 78.6 198 37.9
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 2.4e-12 76.6 191 42.9
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 3.1e-12 76.3 177 33.9
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 5.4e-12 75.5 207 39.1
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 5.4e-12 75.5 222 37.8
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 1.6e-11 73.9 216 37.5
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 2.0e-11 73.6 227 35.7
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 3.5e-11 72.8 215 37.2
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 3.5e-11 72.8 206 38.3
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 3.5e-11 72.8 217 40.1
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 7.8e-11 71.6 235 35.3
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 1.0e-10 71.2 191 32.5
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 1.0e-10 71.2 213 31.0
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 1.7e-10 70.5 200 36.5
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 2.3e-10 70.1 175 38.9
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 2.9e-10 69.7 200 39.5
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 3.8e-10 69.3 208 34.6
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.1e-09 67.8 221 37.1
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.9e-09 67.0 202 37.6
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 1.9e-09 67.0 194 38.7
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.5e-09 66.6 217 36.4
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 2.5e-09 66.6 202 35.6
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 2.5e-09 66.6 225 38.2
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 3.3e-09 66.2 194 36.1
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.3e-09 66.2 207 36.2
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 3.3e-09 66.2 198 42.4
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 5.6e-09 65.5 194 35.6
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 7.3e-09 65.1 229 33.6
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 9.5e-09 64.7 212 29.2
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 1.2e-08 64.3 229 35.4
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 2.8e-08 63.2 203 35.5
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 4.7e-08 62.4 204 39.2
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 1.4e-07 60.8 204 39.2
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.4e-07 60.8 171 38.0
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 2.3e-07 60.1 183 34.4
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 3.0e-07 59.7 181 39.2
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 4.0e-07 59.3 192 37.5
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 5.2e-07 58.9 196 38.3
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 5.2e-07 58.9 214 33.2
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 6.8e-07 58.5 226 34.1
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 8.9e-07 58.2 68 50.0
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.2e-06 57.8 68 50.0
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 1.2e-06 57.8 61 59.0
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 1.2e-06 57.8 61 59.0
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 1.2e-06 57.8 61 59.0
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 1.2e-06 57.8 61 59.0
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 1.2e-06 57.8 61 59.0
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 1.2e-06 57.8 230 34.3
DCAR_019564 Daucus carota HOM05D007784 ORTHO05D008654 1.5e-06 57.4 205 39.0
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 2.0e-06 57.0 95 40.0
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 2.6e-06 56.6 77 44.2
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 3.4e-06 56.2 171 38.0
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 5.7e-06 55.5 67 49.3
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 5.7e-06 55.5 64 50.0
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 9.8e-06 54.7 65 49.2


User provided reference genes

Program Settings