Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.5e-256 889.0 459 100.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.3e-204 715.7 443 79.5
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 7.4e-203 710.7 443 78.3
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.0e-200 702.6 443 78.1
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 2.6e-200 702.2 440 79.1
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 2.6e-200 702.2 443 77.7
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.3e-199 699.9 443 77.9
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 9.3e-198 693.7 451 76.7
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.2e-197 693.3 446 76.7
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 4.6e-197 691.4 453 75.7
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 6.0e-197 691.0 442 77.8
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 1.0e-196 690.3 448 75.9
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 5.1e-196 688.0 443 76.1
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 3.3e-195 685.3 442 76.9
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 2.8e-194 682.2 442 76.5
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 4.8e-194 681.4 443 76.3
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 1.1e-193 680.2 443 74.7
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 5.3e-193 677.9 443 76.3
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 5.3e-193 677.9 441 77.1
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.5e-192 676.4 448 73.9
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 2.6e-192 675.6 443 76.1
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 3.4e-192 675.2 461 73.5
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 4.5e-192 674.9 443 74.7
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.3e-191 673.3 443 74.3
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 1.7e-191 672.9 424 78.3
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 5.0e-191 671.4 444 75.2
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 6.5e-191 671.0 441 75.3
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 8.5e-191 670.6 443 74.0
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.1e-190 670.2 443 73.4
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 2.5e-190 669.1 443 74.0
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 3.2e-190 668.7 443 72.9
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 7.2e-190 667.5 443 72.7
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 7.2e-190 667.5 443 74.3
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 7.2e-190 667.5 442 75.3
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 9.3e-190 667.2 446 74.2
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 9.3e-190 667.2 448 73.2
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 1.2e-189 666.8 446 74.2
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.2e-189 666.8 443 73.1
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 1.6e-189 666.4 458 72.9
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.6e-189 665.2 443 72.7
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 4.6e-189 664.8 448 73.9
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 6.1e-189 664.5 443 73.1
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 7.9e-189 664.1 443 72.7
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.3e-188 663.3 441 75.1
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.8e-188 662.9 443 74.0
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 2.3e-188 662.5 453 72.0
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 2.3e-188 662.5 441 73.5
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.1e-187 660.2 440 74.8
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 2.2e-186 656.0 443 73.1
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 6.3e-186 654.4 453 72.4
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.4e-185 653.3 449 71.7
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 3.1e-185 652.1 442 70.8
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.2e-184 650.2 443 73.1
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 1.5e-184 649.8 443 72.0
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.5e-184 649.8 443 72.2
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.6e-184 649.0 448 69.4
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.0e-183 647.1 444 72.3
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 8.5e-183 644.0 451 71.4
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 2.5e-182 642.5 463 69.8
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 4.2e-182 641.7 442 68.1
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 4.6e-181 638.3 443 70.7
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 3.9e-180 635.2 443 71.3
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 5.1e-180 634.8 442 71.5
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 2.6e-179 632.5 443 69.8
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 7.4e-179 630.9 443 69.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 2.8e-178 629.0 443 69.5
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 4.8e-178 628.2 443 69.1
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 4.8e-178 628.2 443 68.8
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.8e-177 626.3 444 68.9
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 4.1e-177 625.2 443 68.6
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 5.3e-177 624.8 448 67.6
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.5e-176 623.2 448 67.9
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 2.0e-176 622.9 443 69.3
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 4.5e-176 621.7 418 73.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.3e-175 620.2 443 67.0
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 3.8e-175 618.6 442 69.0
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 5.0e-175 618.2 453 67.3
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.4e-174 616.7 456 66.4
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 7.9e-173 610.9 449 67.5
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 3.9e-172 608.6 476 64.5
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 2.8e-170 602.4 460 64.8
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 3.7e-170 602.1 449 67.9
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.1e-169 600.5 449 67.7
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 9.1e-169 597.4 443 68.2
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.6e-168 596.7 454 67.6
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.2e-166 587.8 443 68.2
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.5e-163 580.1 419 67.8
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 3.3e-163 578.9 419 67.5
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 9.1e-161 570.9 460 62.0
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.0e-160 569.7 444 66.7
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 3.8e-159 565.5 446 63.5
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.6e-157 560.1 443 61.6
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.1e-157 559.7 440 62.3
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 3.4e-155 552.4 444 62.8
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 3.7e-154 548.9 491 60.1
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.8e-143 512.3 373 68.6
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 5.7e-139 498.4 395 66.3
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 1.1e-134 484.2 446 51.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.6e-133 480.3 453 56.5
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.0e-131 473.4 355 65.1
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.2e-123 447.6 444 49.1
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 1.5e-123 447.2 438 49.5
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 4.4e-123 445.7 453 49.9
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 9.9e-123 444.5 315 68.3
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 4.1e-121 439.1 444 48.0
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 9.5e-118 427.9 447 47.4
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.8e-115 418.7 278 72.3
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.3e-111 407.5 307 68.4
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 3.3e-110 402.9 439 45.3
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 1.6e-72 277.7 453 35.1
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.6e-64 251.1 424 33.5
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.3e-53 214.9 385 40.8
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 2.9e-50 203.8 134 72.4
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 5.7e-46 189.5 137 67.9
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.3e-37 161.8 107 74.8
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 4.1e-36 156.8 120 67.5
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 5.2e-31 139.8 192 44.3
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 6.8e-31 139.4 453 23.8
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 7.3e-25 119.4 114 59.6
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 1.6e-24 118.2 92 64.1
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 2.1e-24 117.9 94 68.1
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.8e-24 117.5 68 82.4
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 6.4e-21 106.3 195 35.4
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 2.7e-19 100.9 120 50.8
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 3.5e-19 100.5 220 32.3
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 3.0e-18 97.4 218 33.0
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 7.5e-14 82.8 449 24.5
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.9e-13 80.9 81 56.8
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 1.5e-06 58.5 61 50.8
AUR62005379 Chenopodium quinoa HOM05D000449 ORTHO05D000360 4.4e-06 57.0 44 63.6


User provided reference genes

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