Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 1.7e-84 317.4 215 100.0
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 2.7e-21 107.5 181 59.7
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 3.3e-19 100.5 117 47.0
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 3.1e-17 94.0 86 52.3
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 5.2e-17 93.2 88 50.0
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 2.0e-16 91.3 215 53.0
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 5.8e-16 89.7 182 54.4
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 7.5e-16 89.4 186 52.7
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 9.8e-16 89.0 184 53.3
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.3e-15 88.6 91 53.8
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.2e-14 84.0 92 43.5
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 4.1e-14 83.6 178 58.4
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 7.1e-14 82.8 88 45.5
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 3.5e-13 80.5 88 44.3
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.5e-13 80.5 88 44.3
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 4.6e-13 80.1 73 56.2
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 4.6e-13 80.1 138 71.7
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 4.6e-13 80.1 87 47.1
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 7.8e-13 79.3 87 46.0
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.0e-12 79.0 138 71.7
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.3e-12 78.6 162 62.3
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 3.0e-12 77.4 70 52.9
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 3.9e-12 77.0 68 54.4
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 3.9e-12 77.0 59 61.0
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 8.6e-12 75.9 64 54.7
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.1e-11 75.5 88 40.9
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-11 75.5 57 61.4
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 2.5e-11 74.3 90 45.6
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 3.3e-11 73.9 73 54.8
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 9.5e-11 72.4 63 57.1
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 2.1e-10 71.2 88 44.3
DCAR_005762 Daucus carota HOM05D000880 ORTHO05D009684 2.1e-10 71.2 44 77.3
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 2.1e-10 71.2 69 53.6
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 4.7e-10 70.1 79 45.6
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 6.2e-10 69.7 77 45.5
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 6.2e-10 69.7 58 56.9
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.1e-09 68.9 162 59.3
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 1.4e-09 68.6 162 59.9
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.8e-09 68.2 166 56.0
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.3e-09 67.8 162 43.2
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 5.2e-09 66.6 73 49.3
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 5.2e-09 66.6 66 51.5
Lj7P741T35 Lonicera japonica HOM05D000880 ORTHO05D009684 5.2e-09 66.6 40 67.5
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 5.2e-09 66.6 162 56.8
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 8.9e-09 65.9 64 53.1
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 1.5e-08 65.1 46 60.9
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 4.4e-08 63.5 72 45.8
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 4.4e-08 63.5 64 53.1
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 5.8e-08 63.2 58 51.7
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 9.9e-08 62.4 58 53.4
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 1.3e-07 62.0 77 45.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.3e-07 62.0 77 45.5
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 2.2e-07 61.2 104 32.7
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 6.4e-07 59.7 58 53.4
TPR.G1551 Trifolium pratense HOM05D007172 ORTHO05D009267 6.4e-07 59.7 79 36.7
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 6.4e-07 59.7 104 32.7
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 8.4e-07 59.3 157 59.2
Zm00001eb059330 Zea mays HOM05D011046 ORTHO05D013342 1.1e-06 58.9 102 31.4
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 2.4e-06 57.8 39 56.4
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.4e-06 57.8 64 43.8
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 2.4e-06 57.8 60 43.3
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 3.2e-06 57.4 61 49.2
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 7.1e-06 56.2 89 37.1
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 7.1e-06 56.2 59 45.8
Sc07g0000240 Simmondsia chinensis HOM05D000891 ORTHO05D000761 9.2e-06 55.8 112 36.6


User provided reference genes

Program Settings