Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017003 Daucus carota HOM05D003648 ORTHO05D004267 1.4e-166 589.7 345 100.0
DCAR_013539 Daucus carota HOM05D003648 ORTHO05D004267 1.4e-49 201.1 360 45.0
FvH4_6g22070 Fragaria vesca HOM05D003648 ORTHO05D004267 6.7e-31 139.0 366 33.9
Peaxi162Scf00480g00036 Petunia axillaris HOM05D003648 ORTHO05D004267 1.5e-30 137.9 376 33.8
Cfa020157 Carpinus fangiana HOM05D003648 ORTHO05D004267 1.9e-30 137.5 369 33.3
Manes.08G043500 Manihot esculenta HOM05D003648 ORTHO05D004267 9.6e-30 135.2 363 35.0
RcHm_v2.0_Chr3g0479411 Rosa chinensis HOM05D003648 ORTHO05D004267 1.3e-29 134.8 289 36.0
Atru.chr8.1128 Acer truncatum HOM05D003648 ORTHO05D004267 2.1e-29 134.0 370 33.8
FAN02G2154 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.1e-29 134.0 379 33.5
Potri.006G193300 Populus trichocarpa HOM05D003648 ORTHO05D004267 2.8e-29 133.7 373 34.9
TPR.G18228 Trifolium pratense HOM05D003648 ORTHO05D004267 2.8e-29 133.7 370 34.6
FAN09G0401 Fragaria x ananassa HOM05D003648 ORTHO05D004267 3.7e-29 133.3 364 31.6
FAN14G0601 Fragaria x ananassa HOM05D003648 ORTHO05D004267 3.7e-29 133.3 365 33.2
FAN05G4067 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.4e-28 131.3 365 31.5
Psat3g068040 Pisum sativum HOM05D003648 ORTHO05D004267 1.4e-28 131.3 212 43.4
Hma1.2p1_0431F.1_g151600 Hydrangea macrophylla HOM05D003648 ORTHO05D004267 1.8e-28 131.0 262 42.4
Medtr7g093360 Medicago truncatula HOM05D003648 ORTHO05D004267 2.4e-28 130.6 169 48.5
CiPaw.09G029700 Carya illinoinensis HOM05D003648 ORTHO05D004267 4.0e-28 129.8 375 32.5
QL07p024078 Quercus lobata HOM05D003648 ORTHO05D004267 9.0e-28 128.6 391 32.7
Manes.09G036200 Manihot esculenta HOM05D003648 ORTHO05D004267 1.2e-27 128.3 251 40.2
Prupe.7G079000 Prunus persica HOM05D003648 ORTHO05D004267 1.2e-27 128.3 356 34.0
Dinv14314 Davidia involucrata HOM05D003648 ORTHO05D004267 2.0e-27 127.5 254 40.6
Sabra06G0148400 Salix brachista HOM05D003648 ORTHO05D004267 2.0e-27 127.5 358 34.1
Medtr7g093350 Medicago truncatula HOM05D003648 ORTHO05D004267 2.6e-27 127.1 173 44.5
Medtr1g054175 Medicago truncatula HOM05D003648 ORTHO05D004267 5.8e-27 125.9 352 32.7
Actinidia32398 Actinidia chinensis HOM05D003648 ORTHO05D004267 9.9e-27 125.2 250 42.0
Ciclev10012160m.g Citrus clementina HOM05D003648 ORTHO05D004267 9.9e-27 125.2 252 41.3
Cpa.g.sc85.54 Carica papaya HOM05D003648 ORTHO05D004267 1.7e-26 124.4 235 40.4
Glyma.03G145500 Glycine max HOM05D003648 ORTHO05D004267 2.9e-26 123.6 352 33.0
MD14G1055800 Malus domestica HOM05D003648 ORTHO05D004267 2.9e-26 123.6 340 30.6
Thecc.05G173300 Theobroma cacao HOM05D003648 ORTHO05D004267 3.8e-26 123.2 288 33.3
Lj1g0001044 Lotus japonicus HOM05D003648 ORTHO05D004267 8.4e-26 122.1 245 37.6
Sabra16G0061500 Salix brachista HOM05D003648 ORTHO05D004267 8.4e-26 122.1 367 33.0
MSTRG.19911 Avicennia marina HOM05D003648 ORTHO05D004267 1.4e-25 121.3 246 41.1
Potri.016G058100 Populus trichocarpa HOM05D003648 ORTHO05D004267 1.4e-25 121.3 362 34.0
Psat0s5171g0040 Pisum sativum HOM05D003648 ORTHO05D004267 3.2e-25 120.2 203 41.4
CiPaw.10G026000 Carya illinoinensis HOM05D003648 ORTHO05D004267 5.5e-25 119.4 334 33.2
Haze_20003 Corylus avellana HOM05D003648 ORTHO05D004267 9.3e-25 118.6 265 38.9
Nitab4.5_0006890g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 9.3e-25 118.6 247 36.4
Rhsim03G0005500 Rhododendron simsii HOM05D003648 ORTHO05D004267 1.2e-24 118.2 259 39.4
Lsat_1_v5_gn_9_26100 Lactuca sativa HOM05D003648 ORTHO05D004267 1.6e-24 117.9 271 39.1
Nitab4.5_0003600g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 1.6e-24 117.9 242 34.3
CsaV3_3G038720 Cucumis sativus L. HOM05D003648 ORTHO05D004267 2.7e-24 117.1 151 48.3
Glyma.19G148700 Glycine max HOM05D003648 ORTHO05D004267 4.6e-24 116.3 353 32.3
Gorai.002G156300 Gossypium raimondii HOM05D003648 ORTHO05D004267 6.0e-24 115.9 233 38.2
Oeu007752.1 Olea europaea HOM05D003648 ORTHO05D004267 6.0e-24 115.9 212 40.1
VMungo0720G1699 Vigna mungo HOM05D003648 ORTHO05D004267 6.0e-24 115.9 356 29.8
VMungo1383G3335 Vigna mungo HOM05D003648 ORTHO05D004267 1.0e-23 115.2 201 38.8
PGSC0003DMG400023669 Solanum tuberosum HOM05D003648 ORTHO05D004267 1.3e-23 114.8 241 35.7
MSTRG.6486 Avicennia marina HOM05D003648 ORTHO05D004267 1.8e-23 114.4 239 37.7
TWI77G0250 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 1.8e-23 114.4 258 34.9
arahy.Tifrunner.gnm1.ann1.DZ4RFW Arachis hypogaea HOM05D003648 ORTHO05D004267 3.0e-23 113.6 243 38.3
Glyma.09G110100 Glycine max HOM05D003648 ORTHO05D004267 3.0e-23 113.6 368 31.0
Gohir.A01G137604 Gossypium hirsutum HOM05D003648 ORTHO05D004267 3.0e-23 113.6 240 39.2
MD12G1056100 Malus domestica HOM05D003648 ORTHO05D004267 3.9e-23 113.2 363 30.6
arahy.Tifrunner.gnm1.ann1.D8BKSU Arachis hypogaea HOM05D003648 ORTHO05D004267 5.1e-23 112.8 246 37.4
Gohir.D01G125600 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.1e-23 112.8 233 37.3
Duzib128G0816 Durio zibethinus HOM05D003648 ORTHO05D004267 6.7e-23 112.5 270 35.6
Actinidia22042 Actinidia chinensis HOM05D003648 ORTHO05D004267 8.7e-23 112.1 343 34.7
Nn7g35998 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.1e-22 111.7 182 40.1
Solyc10g080530.2 Solanum lycopersicum HOM05D003648 ORTHO05D004267 1.1e-22 111.7 246 36.6
Glyma.02G171900 Glycine max HOM05D003648 ORTHO05D004267 1.5e-22 111.3 298 33.6
Phvul.007G260600 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 1.5e-22 111.3 384 29.7
CAN.G128.46 Capsicum annuum HOM05D003648 ORTHO05D004267 1.9e-22 110.9 217 40.6
Manes.08G043600 Manihot esculenta HOM05D003648 ORTHO05D004267 2.5e-22 110.5 242 38.4
CSS0001516 Camellia sinensis var. sinensis HOM05D003648 ORTHO05D004267 3.3e-22 110.2 241 39.4
MELO3C009616.2 Cucumis melo HOM05D003648 ORTHO05D004267 3.3e-22 110.2 188 41.0
Lalb_Chr18g0047911 Lupinus albus HOM05D003648 ORTHO05D004267 3.3e-22 110.2 403 29.3
Gohir.1Z049549 Gossypium hirsutum HOM05D003648 ORTHO05D004267 4.3e-22 109.8 195 39.5
Nn2g15698 Nelumbo nucifera HOM05D003648 ORTHO05D004267 5.6e-22 109.4 285 33.3
Sabra16G0061400 Salix brachista HOM05D003648 ORTHO05D004267 7.4e-22 109.0 283 34.6
TAR633G0715 Trochodendron aralioides HOM05D003648 ORTHO05D004267 7.4e-22 109.0 161 46.0
Sed0001893 Sechium edule HOM05D003648 ORTHO05D004267 9.6e-22 108.6 148 44.6
Phvul.001G143000 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 6.2e-21 105.9 296 32.4
TPR.G15988 Trifolium pratense HOM05D003648 ORTHO05D004267 6.2e-21 105.9 278 31.7
Haze_20001 Corylus avellana HOM05D003648 ORTHO05D004267 8.2e-21 105.5 284 33.5
Potri.006G193500 Populus trichocarpa HOM05D003648 ORTHO05D004267 8.2e-21 105.5 380 28.9
Lalb_Chr18g0047921 Lupinus albus HOM05D003648 ORTHO05D004267 1.1e-20 105.1 303 33.0
Duzib093G1879 Durio zibethinus HOM05D003648 ORTHO05D004267 1.4e-20 104.8 386 29.8
ClCG10G017600 Citrullus lanatus HOM05D003648 ORTHO05D004267 2.4e-20 104.0 69 71.0
TWI53G1880 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 2.4e-20 104.0 175 41.1
TAR369G0578 Trochodendron aralioides HOM05D003648 ORTHO05D004267 2.4e-20 104.0 195 42.1
TAR623G0235 Trochodendron aralioides HOM05D003648 ORTHO05D004267 2.4e-20 104.0 154 44.2
Actinidia22043 Actinidia chinensis HOM05D003648 ORTHO05D004267 3.1e-20 103.6 354 32.5
Gohir.A04G053800 Gossypium hirsutum HOM05D003648 ORTHO05D004267 3.1e-20 103.6 260 33.5
Gorai.012G100300 Gossypium raimondii HOM05D003648 ORTHO05D004267 6.9e-20 102.4 50 88.0
EL10Ac3g06898 Beta vulgaris HOM05D003648 ORTHO05D004267 9.0e-20 102.1 269 33.5
Eucgr.A02456 Eucalyptus grandis HOM05D003648 ORTHO05D004267 1.2e-19 101.7 380 30.0
Nn7g35986 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.5e-19 101.3 264 33.7
SalBow6G7267 Salvia bowleyana HOM05D003648 ORTHO05D004267 1.5e-19 101.3 195 42.1
CANSAT64G1307 Cannabis sativa HOM05D003648 ORTHO05D004267 3.4e-19 100.1 189 48.7
MBI13_g32435_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 3.4e-19 100.1 56 76.8
CAN.G128.47 Capsicum annuum HOM05D003648 ORTHO05D004267 4.5e-19 99.8 251 36.7
Potri.016G058000 Populus trichocarpa HOM05D003648 ORTHO05D004267 5.8e-19 99.4 349 28.9
Hund19206 Selenicereus undatus HOM05D003648 ORTHO05D004267 5.8e-19 99.4 146 44.5
GSVIVG01033479001 Vitis vinifera HOM05D003648 ORTHO05D004267 1.3e-18 98.2 254 34.3
Sabra06G0148600 Salix brachista HOM05D003648 ORTHO05D004267 1.7e-18 97.8 319 29.2
PGR004G0238 Punica granatum HOM05D003648 ORTHO05D004267 2.9e-18 97.1 73 65.8
vmacro07898 Vaccinium macrocarpon HOM05D003648 ORTHO05D004267 2.9e-18 97.1 164 39.0
MBI19_g03064_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 3.8e-18 96.7 188 38.8
MBI19_g43859_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 3.8e-18 96.7 50 80.0
A03p23540 Brassica napus HOM05D003648 ORTHO05D004267 4.9e-18 96.3 56 75.0
C03p28080 Brassica napus HOM05D003648 ORTHO05D004267 4.9e-18 96.3 56 75.0
BolC3t15177H Brassica oleracea HOM05D003648 ORTHO05D004267 4.9e-18 96.3 56 75.0
BraA03t11571Z Brassica rapa HOM05D003648 ORTHO05D004267 4.9e-18 96.3 56 75.0
COL.COLO4_29331 Corchorus olitorius HOM05D003648 ORTHO05D004267 6.5e-18 95.9 275 31.3
AT2G42040 Arabidopsis thaliana HOM05D003648 ORTHO05D004267 8.4e-18 95.5 58 74.1
Cc06_g15770 Coffea canephora HOM05D003648 ORTHO05D004267 8.4e-18 95.5 209 36.4
MBI19_g23209_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 8.4e-18 95.5 120 45.8
CARHR137130 Cardamine hirsuta HOM05D003648 ORTHO05D004267 1.1e-17 95.1 54 77.8
CDE05G0371 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 1.1e-17 95.1 54 79.6
Ah.13g075770 Amaranthus hybridus HOM05D003648 ORTHO05D004267 1.4e-17 94.7 59 74.6
Dinv16371 Davidia involucrata HOM05D003648 ORTHO05D004267 1.4e-17 94.7 221 37.6
AL4G40410 Arabidopsis lyrata HOM05D003648 ORTHO05D004267 1.9e-17 94.4 50 82.0
Thhalv10017052m.g Eutrema salsugineum HOM05D003648 ORTHO05D004267 1.9e-17 94.4 54 75.9
Nn2g15714 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.9e-17 94.4 211 35.1
BcaC01g05312 Brassica carinata HOM05D003648 ORTHO05D004267 2.5e-17 94.0 56 73.2
ECA247G1467 Erigeron canadensis HOM05D003648 ORTHO05D004267 2.5e-17 94.0 61 72.1
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 4.2e-17 93.2 204 38.2
Dinv24064 Davidia involucrata HOM05D003648 ORTHO05D004267 5.5e-17 92.8 234 35.5
Gohir.D04G089900 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.5e-17 92.8 256 32.0
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 7.1e-17 92.4 201 37.8
THA.LOC104802623 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 7.1e-17 92.4 236 35.6
Lj5g0018704 Lotus japonicus HOM05D003648 ORTHO05D004267 9.3e-17 92.0 231 33.8
Ah.04g152510 Amaranthus hybridus HOM05D003648 ORTHO05D004267 1.2e-16 91.7 234 36.3
BcaB01g03435 Brassica carinata HOM05D003648 ORTHO05D004267 1.6e-16 91.3 54 74.1
CDE06G0452 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 1.6e-16 91.3 71 62.0
SpUn1032_0010 Schrenkiella parvula HOM05D003648 ORTHO05D004267 1.6e-16 91.3 50 78.0
CDE11G0439 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 2.1e-16 90.9 54 74.1
HanXRQChr10g0289891 Helianthus annuus HOM05D003648 ORTHO05D004267 2.1e-16 90.9 111 45.0
GSVIVG01033486001 Vitis vinifera HOM05D003648 ORTHO05D004267 2.7e-16 90.5 41 95.1
CDE04G2150 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 1.8e-15 87.8 126 43.7
A05p02700 Brassica napus HOM05D003648 ORTHO05D004267 3.0e-15 87.0 50 76.0
BraA05t19262Z Brassica rapa HOM05D003648 ORTHO05D004267 3.0e-15 87.0 50 76.0
Oeu039811.1 Olea europaea HOM05D003648 ORTHO05D004267 3.0e-15 87.0 88 56.8
Os02g0773600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 5.1e-15 86.3 50 78.0
BcaC02g07267 Brassica carinata HOM05D003648 ORTHO05D004267 6.7e-15 85.9 43 86.0
Carub.0004s2437 Capsella rubella HOM05D003648 ORTHO05D004267 6.7e-15 85.9 102 49.0
BcaC02g12455 Brassica carinata HOM05D003648 ORTHO05D004267 8.7e-15 85.5 50 74.0
C04p03220 Brassica napus HOM05D003648 ORTHO05D004267 8.7e-15 85.5 50 74.0
BolC4t21960H Brassica oleracea HOM05D003648 ORTHO05D004267 8.7e-15 85.5 50 74.0
BraA04t18655Z Brassica rapa HOM05D003648 ORTHO05D004267 8.7e-15 85.5 50 74.0
Migut.J01846 Erythranthe guttata HOM05D003648 ORTHO05D004267 8.7e-15 85.5 105 49.5
BcaB06g29223 Brassica carinata HOM05D003648 ORTHO05D004267 1.5e-14 84.7 43 83.7
A04p31970 Brassica napus HOM05D003648 ORTHO05D004267 2.5e-14 84.0 44 81.8
Aa31LG1G24140 Aethionema arabicum HOM05D003648 ORTHO05D004267 5.7e-14 82.8 176 35.8
Aqoxy2G00100 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 7.4e-14 82.4 292 31.2
Os06g0207600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 7.4e-14 82.4 41 82.9
Zm00001eb193290 Zea mays HOM05D003648 ORTHO05D004267 9.7e-14 82.0 51 70.6
Nn7g36026 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.3e-13 81.6 122 42.6
C04p69480 Brassica napus HOM05D003648 ORTHO05D004267 2.2e-13 80.9 84 51.2
BolC4t28447H Brassica oleracea HOM05D003648 ORTHO05D004267 2.2e-13 80.9 84 51.2
HPP92_026735 Vanilla planifolia HOM05D003648 ORTHO05D004267 4.8e-13 79.7 66 59.1
HPP92_016181 Vanilla planifolia HOM05D003648 ORTHO05D004267 6.3e-13 79.3 66 59.1
ATR0598G173 Amborella trichopoda HOM05D003648 ORTHO05D004267 3.1e-12 77.0 172 34.3
THA.LOC104824476 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 4.1e-12 76.6 272 32.0
AUR62015354 Chenopodium quinoa HOM05D003648 ORTHO05D004267 4.5e-11 73.2 72 51.4
Dinv36431 Davidia involucrata HOM05D003648 ORTHO05D004267 8.5e-10 68.9 78 48.7
SEGI_21966 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.1e-09 68.6 112 38.4
SEGI_34260 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 2.5e-09 67.4 111 36.9
SEGI_22789 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 9.3e-09 65.5 103 39.8
SEGI_09004 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 6.1e-08 62.8 229 30.1
SEGI_00470 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 3.9e-07 60.1 109 35.8
Actinidia22048 Actinidia chinensis HOM05D003648 ORTHO05D014310 1.9e-06 57.8 263 27.8
Aqoxy1G04270 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 5.7e-06 56.2 131 32.1


User provided reference genes

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