Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016921 Daucus carota HOM05D007532 ORTHO05D009483 1.2e-89 333.2 174 100.0
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 2.5e-18 96.3 193 39.9
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 3.3e-18 95.9 193 40.9
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 4.4e-15 85.5 192 37.0
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 1.3e-14 84.0 182 38.5
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 7.0e-13 78.2 201 33.8
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 7.0e-13 78.2 181 37.0
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.0e-12 76.6 172 34.3
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 7.8e-12 74.7 164 36.6
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 2.3e-11 73.2 203 32.5
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 6.6e-11 71.6 181 37.0
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 6.6e-11 71.6 200 31.0
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 1.1e-10 70.9 196 34.7
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 1.5e-10 70.5 203 30.0
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 1.5e-10 70.5 211 31.3
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 2.5e-10 69.7 198 31.8
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 3.3e-10 69.3 196 32.1
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 5.6e-10 68.6 184 33.2
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 7.3e-10 68.2 182 36.3
Rhsim03G0066200 Rhododendron simsii HOM05D007532 ORTHO05D009483 1.2e-09 67.4 179 34.6
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 1.6e-09 67.0 207 32.4
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 2.1e-09 66.6 182 33.0
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 2.8e-09 66.2 183 32.8
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 2.8e-09 66.2 192 32.8
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 3.6e-09 65.9 184 35.3
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 6.2e-09 65.1 183 33.9
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 6.2e-09 65.1 169 33.1
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 8.0e-09 64.7 197 30.5
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 8.0e-09 64.7 186 34.4
Duzib128G1100 Durio zibethinus HOM05D007532 ORTHO05D009483 1.1e-08 64.3 198 30.8
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.4e-08 63.9 197 31.5
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.8e-08 63.5 186 29.0
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.8e-08 63.5 186 29.0
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 1.8e-08 63.5 213 31.5
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 1.8e-08 63.5 187 32.1
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 2.3e-08 63.2 197 31.5
Nitab4.5_0000020g0210 Nicotiana tabacum HOM05D007532 ORTHO05D009483 3.1e-08 62.8 221 31.7
Nitab4.5_0006654g0010 Nicotiana tabacum HOM05D007532 ORTHO05D009483 3.1e-08 62.8 221 31.2
Lj1C1049T4 Lonicera japonica HOM05D007532 ORTHO05D009483 5.2e-08 62.0 125 40.8
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 6.8e-08 61.6 176 30.7
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 6.8e-08 61.6 176 30.7
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 6.8e-08 61.6 202 32.7
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 1.2e-07 60.8 167 32.3
Aqoxy1G00693 Aquilegia oxysepala HOM05D007532 ORTHO05D009483 1.5e-07 60.5 176 31.2
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 2.6e-07 59.7 203 32.5
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 4.4e-07 58.9 189 31.2
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 5.8e-07 58.5 192 30.7
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 5.8e-07 58.5 193 31.1
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 9.8e-07 57.8 195 30.8
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 1.7e-06 57.0 191 32.5
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 1.7e-06 57.0 191 32.5
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 4.9e-06 55.5 161 30.4
Lsat_1_v5_gn_2_55700 Lactuca sativa HOM05D007532 ORTHO05D009483 4.9e-06 55.5 199 29.1
PSO339G0695 Papaver somniferum HOM05D007532 ORTHO05D009483 6.4e-06 55.1 194 29.4
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 8.3e-06 54.7 167 31.1


User provided reference genes

Program Settings