Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 2.9e-82 308.5 160 100.0
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 3.5e-51 205.3 160 64.4
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 9.5e-49 197.2 160 64.4
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 1.4e-47 193.4 160 60.6
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 3.1e-47 192.2 160 57.5
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 5.8e-46 188.0 160 61.9
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 7.6e-46 187.6 160 61.9
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 2.4e-44 182.6 160 60.0
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 3.2e-44 182.2 160 57.5
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 3.2e-44 182.2 160 56.2
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 1.2e-43 180.3 160 58.1
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 1.6e-43 179.9 160 58.1
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 2.7e-43 179.1 161 58.4
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 6.0e-43 177.9 162 58.0
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 6.6e-42 174.5 161 53.4
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 4.3e-41 171.8 160 53.1
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 4.0e-39 165.2 160 56.2
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 6.9e-39 164.5 150 57.3
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 6.9e-39 164.5 145 55.2
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 2.0e-38 162.9 170 50.6
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 5.8e-38 161.4 160 52.5
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 1.3e-37 160.2 188 48.9
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 3.8e-37 158.7 160 52.5
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 4.9e-37 158.3 161 54.0
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.1e-36 157.1 160 51.2
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.1e-36 157.1 160 51.2
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 1.9e-36 156.4 160 53.1
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 4.2e-36 155.2 163 51.5
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 5.4e-36 154.8 145 56.6
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 7.1e-36 154.5 161 52.8
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 7.1e-36 154.5 142 53.5
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 1.6e-35 153.3 163 54.6
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.6e-35 153.3 161 52.2
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.6e-35 153.3 164 51.2
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 1.6e-35 153.3 164 48.2
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 2.1e-35 152.9 160 50.6
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.5e-35 152.1 161 51.6
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.5e-35 152.1 161 51.6
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 7.8e-35 151.0 160 51.2
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 2.3e-34 149.4 164 50.0
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 2.3e-34 149.4 163 49.1
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 2.3e-34 149.4 161 50.9
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.3e-34 149.4 167 49.7
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 2.3e-34 149.4 184 46.2
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 3.9e-34 148.7 160 48.8
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 5.1e-34 148.3 186 46.8
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 6.6e-34 147.9 187 46.5
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 1.1e-33 147.1 160 48.1
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 1.1e-33 147.1 164 49.4
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 1.1e-33 147.1 151 49.7
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 1.1e-33 147.1 160 46.9
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 1.5e-33 146.7 187 46.5
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 1.9e-33 146.4 164 48.2
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 2.5e-33 146.0 141 54.6
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 3.3e-33 145.6 161 50.9
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 5.6e-33 144.8 161 49.1
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 7.3e-33 144.4 164 48.2
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 7.3e-33 144.4 164 48.2
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 9.6e-33 144.1 164 47.6
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 9.6e-33 144.1 164 47.6
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 9.6e-33 144.1 164 47.6
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 9.6e-33 144.1 161 50.3
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 1.3e-32 143.7 164 47.6
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 1.3e-32 143.7 161 50.9
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.6e-32 143.3 164 48.2
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 6.2e-32 141.4 175 48.0
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 8.1e-32 141.0 108 63.9
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 1.8e-31 139.8 162 45.7
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 6.9e-31 137.9 167 47.9
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 6.9e-31 137.9 160 45.0
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 1.5e-30 136.7 165 48.5
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 1.7e-29 133.3 168 45.8
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 8.4e-29 131.0 165 45.5
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 1.9e-28 129.8 163 45.4
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 5.4e-28 128.3 163 44.8
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 5.4e-28 128.3 163 44.8
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 1.2e-27 127.1 106 60.4
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 1.0e-26 124.0 166 44.0
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 1.8e-26 123.2 163 42.3
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 2.3e-26 122.9 169 45.0
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 1.6e-24 116.7 83 65.1
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.5e-22 110.2 81 64.2
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 2.2e-21 106.3 142 42.3
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 3.8e-21 105.5 160 40.0
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 3.8e-21 105.5 85 58.8
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 3.2e-20 102.4 162 40.7
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 9.3e-20 100.9 79 63.3
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.6e-19 100.1 161 39.8
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 1.3e-18 97.1 145 38.6
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 1.8e-18 96.7 96 57.3
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 2.5e-17 92.8 166 36.1
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 3.3e-17 92.4 79 63.3
Zm00001eb347080 Zea mays HOM05D007488 ORTHO05D009461 2.8e-16 89.4 164 34.8
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 6.9e-15 84.7 180 34.4
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 1.5e-14 83.6 66 60.6
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 7.1e-12 74.7 90 51.1
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 7.1e-12 74.7 90 51.1
Os01g0955600 Oryza sativa ssp. japonica HOM05D007488 ORTHO05D009461 2.5e-09 66.2 112 37.5
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 3.7e-08 62.4 76 42.1
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 8.2e-08 61.2 76 42.1


User provided reference genes

Program Settings