Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.7e-51 205.7 100 100.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 5.3e-21 104.4 93 52.7
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.2e-20 103.2 93 53.8
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.2e-19 99.0 97 49.5
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 3.8e-19 98.2 95 51.6
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 3.8e-19 98.2 89 53.9
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.4e-18 96.3 94 50.0
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.9e-18 95.9 94 51.1
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.9e-18 95.9 92 54.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.9e-18 95.9 96 49.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.9e-18 95.9 90 50.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 2.4e-18 95.5 89 51.7
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 2.4e-18 95.5 93 51.6
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.4e-18 95.5 93 51.6
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.4e-18 95.5 93 51.6
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 2.4e-18 95.5 89 53.9
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 3.2e-18 95.1 87 52.9
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 3.2e-18 95.1 89 49.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 3.2e-18 95.1 97 51.5
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 4.2e-18 94.7 94 50.0
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 4.2e-18 94.7 97 48.5
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.2e-18 94.7 89 53.9
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.2e-18 94.7 89 53.9
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 7.1e-18 94.0 94 50.0
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 7.1e-18 94.0 94 50.0
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 7.1e-18 94.0 94 50.0
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 7.1e-18 94.0 93 51.6
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 9.3e-18 93.6 98 49.0
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 9.3e-18 93.6 98 49.0
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 9.3e-18 93.6 95 50.5
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 9.3e-18 93.6 98 50.0
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 9.3e-18 93.6 96 49.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.2e-17 93.2 86 52.3
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.2e-17 93.2 94 47.9
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.6e-17 92.8 96 50.0
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.6e-17 92.8 95 50.5
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.6e-17 92.8 101 47.5
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.1e-17 92.4 97 49.5
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.1e-17 92.4 88 48.9
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.1e-17 92.4 93 50.5
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.1e-17 92.4 89 52.8
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 2.7e-17 92.0 87 51.7
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 2.7e-17 92.0 93 48.4
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.7e-17 92.0 87 54.0
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 3.5e-17 91.7 97 50.5
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.5e-17 91.7 96 44.8
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 4.6e-17 91.3 96 45.8
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 4.6e-17 91.3 95 53.7
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 4.6e-17 91.3 90 50.0
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 7.9e-17 90.5 97 49.5
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.3e-16 89.7 93 48.4
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.3e-16 89.0 91 46.2
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.0e-16 88.6 100 49.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 3.0e-16 88.6 87 51.7
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 3.0e-16 88.6 89 44.9
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 3.9e-16 88.2 89 49.4
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-16 87.8 86 47.7
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-16 87.8 86 47.7
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 5.1e-16 87.8 86 47.7
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 5.1e-16 87.8 86 47.7
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 5.1e-16 87.8 86 47.7
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 5.1e-16 87.8 94 48.9
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 6.7e-16 87.4 75 54.7
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 6.7e-16 87.4 87 51.7
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 8.7e-16 87.0 91 48.4
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 8.7e-16 87.0 95 47.4
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-15 86.7 86 46.5
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.5e-15 86.3 96 46.9
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.9e-15 85.9 85 49.4
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.5e-15 85.5 96 51.0
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 2.5e-15 85.5 89 48.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 3.3e-15 85.1 95 43.2
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 4.3e-15 84.7 85 47.1
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 5.6e-15 84.3 77 54.5
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 7.4e-15 84.0 95 46.3
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 7.4e-15 84.0 97 48.5
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 7.4e-15 84.0 87 48.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 9.6e-15 83.6 94 46.8
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.3e-14 83.2 95 47.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.1e-14 82.4 85 50.6
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 2.8e-14 82.0 84 45.2
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 2.8e-14 82.0 95 41.1
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 2.8e-14 82.0 96 44.8
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 6.2e-14 80.9 84 45.2
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 6.2e-14 80.9 84 45.2
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 6.2e-14 80.9 93 44.1
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.1e-13 80.1 84 48.8
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.1e-13 80.1 70 54.3
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.1e-13 80.1 94 45.7
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-13 79.7 84 44.0
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.8e-13 79.3 96 45.8
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 2.4e-13 79.0 84 44.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.4e-13 79.0 98 40.8
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 3.1e-13 78.6 84 42.9
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 3.1e-13 78.6 99 42.4
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.1e-13 78.6 76 48.7
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 6.9e-13 77.4 64 57.8
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 4.5e-12 74.7 94 43.6
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 4.5e-12 74.7 82 45.1
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.0e-11 73.6 60 55.0
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 2.2e-11 72.4 78 47.4
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 8.4e-11 70.5 116 36.2
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 1.9e-10 69.3 79 40.5
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 3.2e-10 68.6 94 39.4
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.2e-10 68.6 77 44.2
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.0e-08 63.5 66 45.5
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-08 63.2 69 46.4
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.0e-08 62.0 97 40.2
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 9.6e-07 57.0 76 42.1


User provided reference genes

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