Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 1.6e-30 135.2 58 100.0
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 2.9e-11 71.2 37 86.5
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 3.7e-11 70.9 32 87.5
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 4.9e-11 70.5 32 81.2
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 6.4e-11 70.1 32 84.4
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 1.1e-10 69.3 32 84.4
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 1.1e-10 69.3 32 81.2
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.4e-10 68.9 32 81.2
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 1.9e-10 68.6 32 81.2
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 1.9e-10 68.6 56 57.1
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 1.9e-10 68.6 34 76.5
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 2.4e-10 68.2 32 81.2
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 4.1e-10 67.4 37 81.1
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 5.4e-10 67.0 32 78.1
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 5.4e-10 67.0 32 81.2
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 5.4e-10 67.0 33 78.8
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 7.1e-10 66.6 33 75.8
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 9.2e-10 66.2 32 81.2
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 9.2e-10 66.2 32 78.1
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 9.2e-10 66.2 53 56.6
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 9.2e-10 66.2 32 78.1
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.2e-09 65.9 32 78.1
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 1.2e-09 65.9 32 75.0
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 1.2e-09 65.9 32 75.0
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 1.2e-09 65.9 32 75.0
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.2e-09 65.9 32 78.1
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 1.2e-09 65.9 32 78.1
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 2.1e-09 65.1 31 80.6
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 2.1e-09 65.1 46 60.9
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 2.7e-09 64.7 35 74.3
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 2.7e-09 64.7 37 75.7
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 2.7e-09 64.7 32 78.1
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 3.5e-09 64.3 35 74.3
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 3.5e-09 64.3 38 71.1
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 3.5e-09 64.3 38 73.7
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 3.5e-09 64.3 32 75.0
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 4.6e-09 63.9 32 75.0
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 4.6e-09 63.9 32 75.0
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 4.6e-09 63.9 33 81.8
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 6.0e-09 63.5 32 78.1
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-09 63.2 32 75.0
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-09 63.2 32 75.0
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-09 63.2 32 75.0
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-09 63.2 32 75.0
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 7.8e-09 63.2 35 77.1
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 7.8e-09 63.2 32 75.0
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.0e-08 62.8 32 75.0
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 1.0e-08 62.8 35 74.3
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 1.0e-08 62.8 32 75.0
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 1.0e-08 62.8 32 78.1
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.3e-08 62.4 32 78.1
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 1.3e-08 62.4 33 78.8
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 1.3e-08 62.4 33 72.7
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 1.7e-08 62.0 32 75.0
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 1.7e-08 62.0 32 75.0
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.7e-08 62.0 32 78.1
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 2.3e-08 61.6 32 75.0
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 2.3e-08 61.6 35 71.4
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 2.3e-08 61.6 35 71.4
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 2.3e-08 61.6 35 74.3
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 3.0e-08 61.2 32 71.9
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 3.0e-08 61.2 39 69.2
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 3.0e-08 61.2 34 73.5
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 3.9e-08 60.8 32 71.9
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 3.9e-08 60.8 32 71.9
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 3.9e-08 60.8 32 71.9
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 3.9e-08 60.8 32 75.0
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 5.1e-08 60.5 34 76.5
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 6.6e-08 60.1 32 75.0
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 6.6e-08 60.1 32 68.8
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 6.6e-08 60.1 32 71.9
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 8.6e-08 59.7 32 71.9
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 8.6e-08 59.7 32 68.8
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 8.6e-08 59.7 33 78.8
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 8.6e-08 59.7 32 68.8
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 1.1e-07 59.3 33 66.7
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 1.1e-07 59.3 35 71.4
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 1.1e-07 59.3 33 75.8
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.1e-07 59.3 32 68.8
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 1.1e-07 59.3 32 65.6
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.9e-07 58.5 32 71.9
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 2.5e-07 58.2 34 67.6
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 2.5e-07 58.2 32 68.8
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 4.3e-07 57.4 32 68.8
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 4.3e-07 57.4 32 68.8
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 4.3e-07 57.4 34 67.6
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 5.6e-07 57.0 29 72.4
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 5.6e-07 57.0 33 72.7
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 5.6e-07 57.0 32 68.8
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 5.6e-07 57.0 32 68.8
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 5.6e-07 57.0 29 72.4
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 5.6e-07 57.0 34 70.6
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 9.5e-07 56.2 33 63.6
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 9.5e-07 56.2 33 63.6
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 9.5e-07 56.2 32 68.8
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 1.2e-06 55.8 33 66.7
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.6e-06 55.5 31 67.7
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.6e-06 55.5 31 67.7
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 2.1e-06 55.1 32 65.6
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 2.8e-06 54.7 35 62.9
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 2.8e-06 54.7 37 62.2
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 4.7e-06 53.9 32 59.4
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 6.2e-06 53.5 29 65.5
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 8.1e-06 53.1 33 60.6
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 8.1e-06 53.1 33 60.6
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 8.1e-06 53.1 33 60.6


User provided reference genes

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