Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 4.1e-47 191.0 96 100.0
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 5.4e-39 164.1 98 84.7
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 9.2e-39 163.3 97 86.6
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 9.2e-39 163.3 97 86.6
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 1.2e-38 162.9 97 86.6
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 3.5e-38 161.4 101 83.2
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 4.5e-38 161.0 99 80.8
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 1.3e-37 159.5 98 81.6
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.7e-37 159.1 100 79.0
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.7e-37 159.1 96 82.3
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 5.0e-37 157.5 100 79.0
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 5.0e-37 157.5 102 77.5
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 8.6e-37 156.8 99 78.8
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 1.1e-36 156.4 99 78.8
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.1e-36 156.4 99 79.8
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.1e-36 156.4 105 75.2
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.1e-36 156.4 103 77.7
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.9e-36 155.6 96 79.2
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.9e-36 155.6 105 75.2
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.9e-36 155.6 105 75.2
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 3.3e-36 154.8 101 76.2
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 3.3e-36 154.8 101 78.2
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 3.3e-36 154.8 106 76.4
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 7.3e-36 153.7 102 76.5
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 9.5e-36 153.3 103 76.7
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.2e-35 152.9 100 77.0
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.6e-35 152.5 100 77.0
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.6e-35 152.5 101 76.2
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.6e-35 152.5 98 79.6
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.8e-35 151.8 101 76.2
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 3.6e-35 151.4 104 77.9
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 3.6e-35 151.4 102 75.5
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 3.6e-35 151.4 106 72.6
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.7e-35 151.0 97 79.4
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.7e-35 151.0 97 79.4
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.7e-35 151.0 97 79.4
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 6.1e-35 150.6 100 76.0
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 8.0e-35 150.2 96 76.0
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.4e-34 149.4 106 71.7
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.4e-34 149.4 102 75.5
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 3.1e-34 148.3 104 74.0
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 3.1e-34 148.3 104 73.1
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 3.1e-34 148.3 101 74.3
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 3.1e-34 148.3 103 74.8
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.1e-34 148.3 103 74.8
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.1e-34 148.3 103 74.8
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.1e-34 148.3 103 74.8
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.1e-34 148.3 103 74.8
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 4.0e-34 147.9 96 77.1
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 6.8e-34 147.1 101 74.3
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 6.8e-34 147.1 100 75.0
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 6.8e-34 147.1 99 76.8
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 8.9e-34 146.7 97 76.3
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 8.9e-34 146.7 101 75.2
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.2e-33 146.4 101 73.3
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.2e-33 146.4 103 73.8
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.2e-33 146.4 100 75.0
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.5e-33 146.0 115 69.6
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 1.5e-33 146.0 105 72.4
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.5e-33 146.0 100 74.0
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.5e-33 146.0 100 74.0
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.5e-33 146.0 100 74.0
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 2.6e-33 145.2 100 74.0
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 2.6e-33 145.2 96 76.0
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 4.4e-33 144.4 101 74.3
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 5.8e-33 144.1 101 70.3
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 7.5e-33 143.7 99 73.7
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.3e-32 142.9 96 72.9
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 2.2e-32 142.1 104 68.3
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 2.2e-32 142.1 98 73.5
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 3.7e-32 141.4 97 72.2
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 4.9e-32 141.0 104 70.2
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 6.4e-32 140.6 112 68.8
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.4e-32 140.6 100 72.0
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 8.3e-32 140.2 100 74.0
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 7.0e-31 137.1 109 67.9
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 2.0e-30 135.6 108 67.6
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 2.0e-30 135.6 108 67.6
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 2.0e-30 135.6 108 67.6
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 2.0e-30 135.6 108 67.6
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.7e-30 135.2 105 68.6
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 2.7e-30 135.2 105 68.6
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 1.0e-29 133.3 109 65.1
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 1.0e-29 133.3 103 68.0
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.3e-29 132.9 105 66.7
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.7e-29 132.5 111 64.0
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.7e-29 132.5 111 64.0
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 2.3e-29 132.1 112 63.4
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.3e-29 132.1 103 66.0
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 3.0e-29 131.7 113 61.9
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 3.0e-29 131.7 95 67.4
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.9e-29 131.3 108 65.7
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.9e-29 131.3 108 65.7
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.5e-28 129.4 94 68.1
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.2e-26 120.9 89 66.3
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 8.9e-26 120.2 85 72.9
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 2.0e-25 119.0 111 61.3
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 4.9e-24 114.4 95 62.1
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 3.0e-21 105.1 68 80.9
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 5.1e-21 104.4 65 81.5
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 5.1e-21 104.4 65 81.5
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 3.3e-20 101.7 96 56.2
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 6.2e-19 97.4 94 55.3
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 6.2e-19 97.4 96 57.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.8e-18 95.9 76 65.8
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.3e-18 95.5 96 52.1
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 5.2e-18 94.4 63 74.6
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.0e-17 92.4 73 64.4
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 8.3e-16 87.0 97 49.5
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 9.2e-15 83.6 93 54.8
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.3e-13 79.0 57 66.7
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.9e-13 78.2 73 54.8
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.8e-10 69.3 49 69.4
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 6.4e-08 60.8 42 69.0
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.1e-06 55.8 33 75.8


User provided reference genes

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