Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 5.7e-113 411.0 216 100.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 2.9e-40 169.5 224 51.8
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.4e-39 166.4 211 53.6
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.4e-39 166.4 224 51.3
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.4e-39 166.4 224 51.3
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 4.2e-39 165.6 227 50.7
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.2e-39 165.6 227 50.7
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.4e-39 165.2 227 51.1
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 5.4e-39 165.2 212 53.3
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 7.1e-39 164.9 222 52.7
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.1e-39 164.9 216 54.2
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.6e-38 163.7 217 53.9
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 2.1e-38 163.3 213 54.0
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 2.7e-38 162.9 212 52.4
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 6.0e-38 161.8 217 52.5
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 7.8e-38 161.4 215 51.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.0e-37 161.0 220 49.5
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.3e-37 160.6 217 48.4
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 8.7e-37 157.9 212 52.4
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.5e-36 156.4 217 50.7
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 3.3e-36 156.0 211 50.7
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 5.6e-36 155.2 213 52.1
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.6e-36 155.2 210 50.0
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.6e-35 153.7 210 51.4
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.4e-34 149.8 211 50.2
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 3.1e-34 149.4 210 48.6
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 5.3e-34 148.7 211 49.8
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 9.0e-34 147.9 216 49.5
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.5e-33 147.1 227 47.6
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.6e-33 146.4 211 49.8
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 5.8e-33 145.2 216 49.5
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 7.6e-33 144.8 212 47.2
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.7e-32 143.7 224 44.2
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 2.9e-32 142.9 212 47.2
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.1e-31 141.0 215 47.4
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.4e-31 140.6 216 45.4
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 2.4e-31 139.8 212 46.2
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 4.6e-30 135.6 206 45.6
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 4.6e-30 135.6 218 45.0
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 6.0e-30 135.2 224 45.1
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 7.9e-30 134.8 221 42.5
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.0e-29 134.4 217 43.8
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.0e-29 134.4 211 44.1
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 2.3e-29 133.3 217 42.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 1.5e-28 130.6 200 47.0
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.6e-27 127.1 208 48.1
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.6e-27 125.9 219 41.6
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.8e-26 123.6 208 44.7
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.4e-26 123.2 205 45.4
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.0e-26 122.5 205 45.9
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 4.0e-26 122.5 214 42.1
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 9.0e-26 121.3 202 46.5
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 9.0e-26 121.3 204 47.5
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.2e-25 120.9 207 43.5
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 2.0e-25 120.2 198 46.0
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 7.6e-25 118.2 201 42.8
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 7.6e-25 118.2 212 42.9
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.9e-23 113.6 198 43.9
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.9e-23 113.6 205 42.4
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 3.2e-23 112.8 203 41.4
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 3.2e-23 112.8 242 38.0
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 4.2e-23 112.5 197 42.6
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.1e-23 111.7 211 44.1
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 2.7e-22 109.8 198 40.4
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 4.6e-22 109.0 196 40.8
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 4.6e-22 109.0 204 45.1
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.0e-21 107.8 200 41.5
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.3e-21 107.5 198 42.4
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.8e-21 107.1 194 44.8
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 2.3e-21 106.7 198 40.9
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 3.0e-21 106.3 209 41.6
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 3.9e-21 105.9 201 40.8
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 6.7e-21 105.1 228 40.4
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 6.7e-21 105.1 197 40.6
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 6.7e-21 105.1 203 39.9
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.1e-20 104.4 219 42.5
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.5e-20 104.0 164 46.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.5e-20 103.2 205 40.5
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.3e-19 100.9 204 39.2
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 1.3e-19 100.9 111 48.6
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.1e-19 100.1 193 41.5
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 4.8e-19 99.0 204 39.7
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 4.8e-19 99.0 206 38.3
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 3.1e-18 96.3 104 51.0
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.1e-18 96.3 155 46.5
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 1.5e-17 94.0 202 37.6
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.4e-17 92.8 209 37.8
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.9e-16 89.7 197 40.1
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.0e-13 81.3 169 34.9
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 3.0e-13 79.7 148 43.2
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 3.3e-12 76.3 84 51.2
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 6.3e-11 72.0 197 34.0
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 9.0e-10 68.2 192 33.9
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 2.5e-07 60.1 206 30.6
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 4.2e-07 59.3 35 74.3
SEGI_03822 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 3.6e-06 56.2 228 31.6


User provided reference genes

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