Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 3.1e-219 765.0 426 100.0
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 1.2e-207 726.5 426 96.2
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 4.0e-187 658.3 425 80.7
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 9.9e-186 653.7 428 78.3
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.2e-183 646.7 428 80.4
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 2.7e-183 645.6 426 77.9
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 1.0e-182 643.7 424 77.8
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 6.7e-182 641.0 427 80.1
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 1.1e-181 640.2 424 77.8
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.9e-181 639.4 428 77.3
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 3.3e-181 638.6 432 80.1
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 1.3e-180 636.7 429 82.1
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 1.3e-180 636.7 428 79.7
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.1e-179 633.6 428 79.4
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 2.4e-179 632.5 432 78.2
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 1.2e-178 630.2 464 77.6
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 1.7e-177 626.3 421 77.2
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 2.4e-176 622.5 423 77.1
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 3.2e-176 622.1 427 79.4
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 5.5e-176 621.3 442 76.5
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 3.5e-175 618.6 423 77.1
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 4.6e-175 618.2 425 75.5
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 7.9e-175 617.5 425 79.5
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 7.9e-175 617.5 425 75.8
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 1.8e-174 616.3 428 78.5
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 3.9e-174 615.1 425 76.7
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 4.3e-173 611.7 424 76.2
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 7.4e-173 610.9 426 76.3
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 1.3e-172 610.1 424 75.0
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 6.2e-172 607.8 426 79.1
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 8.2e-172 607.4 426 80.8
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 1.4e-171 606.7 422 75.6
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 4.0e-171 605.1 424 79.5
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 5.3e-171 604.7 433 76.9
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 5.3e-171 604.7 423 79.2
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 9.0e-171 604.0 426 75.6
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 1.2e-170 603.6 431 73.8
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 1.5e-170 603.2 418 76.8
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 1.5e-170 603.2 418 76.8
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 1.5e-170 603.2 418 76.8
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 2.6e-170 602.4 435 74.3
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 2.6e-170 602.4 418 80.1
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 3.4e-170 602.1 418 76.6
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 4.5e-170 601.7 418 76.6
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 4.5e-170 601.7 418 76.6
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 4.5e-170 601.7 420 80.7
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 7.6e-170 600.9 433 77.1
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 2.9e-169 599.0 426 74.4
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 6.5e-169 597.8 426 73.7
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 1.4e-168 596.7 430 74.0
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 1.9e-168 596.3 432 78.5
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 1.9e-168 596.3 418 76.3
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.2e-168 595.5 432 76.4
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 1.2e-167 593.6 432 72.9
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 1.6e-167 593.2 426 74.2
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 2.1e-167 592.8 424 72.4
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 2.7e-167 592.4 427 72.1
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 4.6e-167 591.7 421 78.1
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 7.9e-167 590.9 424 72.6
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 1.8e-166 589.7 435 70.8
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 3.0e-166 589.0 401 76.8
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 6.7e-166 587.8 418 74.9
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 8.7e-166 587.4 426 74.4
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 1.5e-165 586.6 418 74.9
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 1.9e-165 586.3 424 72.2
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 4.3e-165 585.1 424 72.4
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 7.4e-165 584.3 418 74.6
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 7.4e-165 584.3 424 71.5
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 9.7e-165 583.9 424 71.5
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 1.6e-164 583.2 418 74.4
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 6.3e-164 581.3 424 71.9
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 1.1e-163 580.5 438 70.8
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 6.9e-163 577.8 418 73.9
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 9.0e-163 577.4 467 67.9
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 2.6e-162 575.9 431 71.5
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 4.5e-162 575.1 431 72.9
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 7.6e-162 574.3 429 70.6
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 1.0e-161 573.9 422 73.0
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 1.1e-160 570.5 429 69.9
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 1.1e-160 570.5 424 71.9
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 7.2e-160 567.8 423 69.3
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 9.4e-160 567.4 434 71.4
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 1.6e-159 566.6 420 78.3
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 2.1e-159 566.2 422 72.7
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 4.6e-159 565.1 423 69.5
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 3.9e-158 562.0 449 69.7
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.5e-157 560.1 461 68.1
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 1.5e-157 560.1 423 70.0
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.5e-157 559.3 440 70.0
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 2.8e-156 555.8 429 68.1
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 6.3e-156 554.7 424 70.5
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 8.2e-156 554.3 431 66.8
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 5.3e-155 551.6 384 74.0
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 9.1e-155 550.8 420 75.7
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 7.7e-154 547.7 432 73.6
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.9e-153 545.8 430 67.7
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 3.8e-153 545.4 425 67.3
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 1.8e-150 536.6 432 69.7
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 1.7e-148 530.0 515 61.9
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 2.8e-148 529.3 470 63.8
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 5.3e-147 525.0 422 67.5
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 3.8e-145 518.8 427 65.1
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 1.4e-144 516.9 507 57.4
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 2.7e-143 512.7 424 67.2
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 3.6e-143 512.3 430 66.7
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 3.0e-142 509.2 482 66.0
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 8.8e-142 507.7 430 65.6
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 1.1e-141 507.3 379 77.3
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 1.5e-141 506.9 388 69.6
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 7.4e-141 504.6 380 75.0
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.9e-136 490.0 380 72.9
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 8.2e-132 474.6 428 62.4
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 1.2e-130 470.7 418 60.8
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 7.2e-128 461.5 418 60.8
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 3.4e-125 452.6 414 65.2
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 5.7e-125 451.8 415 58.8
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 1.6e-122 443.7 434 55.3
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 5.0e-121 438.7 322 77.3
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 8.6e-121 438.0 367 65.7
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 8.9e-118 427.9 390 62.8
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 4.9e-116 422.2 427 53.9
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 1.4e-115 420.6 428 54.4
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.8e-115 420.2 399 58.9
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.5e-112 410.6 428 58.6
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 5.2e-110 402.1 337 63.8
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 3.4e-109 399.4 434 51.2
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.0e-97 361.3 355 57.7
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 2.6e-69 266.9 383 39.9
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 8.1e-63 245.4 426 37.1
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 3.8e-60 236.5 218 58.7
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 5.7e-40 169.5 208 58.7
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 3.5e-29 133.7 84 79.8
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 4.7e-18 96.7 55 83.6
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 5.2e-17 93.2 46 93.5
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 5.2e-17 93.2 46 93.5


User provided reference genes

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