Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 6.5e-94 347.4 182 100.0
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 3.7e-49 198.7 149 67.8
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 6.4e-49 198.0 143 68.5
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.6e-47 193.4 168 60.7
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 2.0e-47 193.0 139 69.1
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 2.0e-47 193.0 192 56.8
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 2.0e-47 193.0 145 66.2
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.7e-47 192.6 179 60.3
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 4.6e-47 191.8 145 67.6
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 4.6e-47 191.8 187 58.3
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 4.6e-47 191.8 148 67.6
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 6.0e-47 191.4 133 72.9
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 7.8e-47 191.0 146 64.4
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 7.8e-47 191.0 189 59.3
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.0e-46 190.7 145 65.5
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 1.7e-46 189.9 153 62.7
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 2.3e-46 189.5 184 54.9
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 2.3e-46 189.5 135 66.7
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 2.3e-46 189.5 153 63.4
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.0e-46 189.1 140 67.9
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 3.0e-46 189.1 186 57.5
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.9e-46 188.7 140 67.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.9e-46 188.7 179 59.2
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 3.9e-46 188.7 186 57.5
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 5.0e-46 188.3 150 64.0
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 5.0e-46 188.3 148 64.9
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 6.6e-46 188.0 157 61.1
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 6.6e-46 188.0 142 66.2
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 8.6e-46 187.6 131 68.7
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.1e-45 187.2 184 56.5
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.1e-45 187.2 140 66.4
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.5e-45 186.8 147 62.6
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 1.5e-45 186.8 145 64.1
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 3.3e-45 185.7 135 66.7
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 3.3e-45 185.7 187 55.6
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 5.6e-45 184.9 129 72.1
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 5.6e-45 184.9 172 57.6
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 7.3e-45 184.5 151 61.6
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 7.3e-45 184.5 155 61.3
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 9.5e-45 184.1 180 56.7
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.2e-44 183.7 145 67.6
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.2e-44 183.7 145 67.6
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.2e-44 183.7 179 56.4
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.2e-44 183.7 130 68.5
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 1.6e-44 183.3 153 64.7
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.6e-44 183.3 141 66.0
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.1e-44 183.0 181 59.1
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 3.6e-44 182.2 124 73.4
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 3.6e-44 182.2 145 66.9
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 3.6e-44 182.2 145 66.9
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 3.6e-44 182.2 146 64.4
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 4.7e-44 181.8 145 64.8
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 6.2e-44 181.4 143 65.0
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 6.2e-44 181.4 138 68.8
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 6.2e-44 181.4 182 56.0
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 6.2e-44 181.4 131 68.7
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 1.1e-43 180.6 193 56.0
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.1e-43 180.6 188 55.9
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 1.4e-43 180.3 182 55.5
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 1.4e-43 180.3 181 55.8
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 2.3e-43 179.5 181 54.1
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 3.1e-43 179.1 177 57.1
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 4.0e-43 178.7 179 55.9
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 4.0e-43 178.7 141 66.7
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 4.0e-43 178.7 182 55.5
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 4.0e-43 178.7 116 73.3
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 5.2e-43 178.3 140 67.9
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 5.2e-43 178.3 190 54.7
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 8.9e-43 177.6 187 56.7
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 8.9e-43 177.6 139 63.3
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.5e-42 176.8 181 53.0
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 2.0e-42 176.4 136 69.1
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 3.4e-42 175.6 171 56.7
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 4.4e-42 175.3 183 53.6
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 4.4e-42 175.3 135 67.4
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 5.8e-42 174.9 140 66.4
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 9.8e-42 174.1 140 66.4
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 9.8e-42 174.1 140 65.7
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 9.8e-42 174.1 140 65.7
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.3e-41 173.7 150 61.3
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.7e-41 173.3 139 66.2
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.7e-41 173.3 150 61.3
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 2.2e-41 172.9 149 61.1
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.2e-41 172.9 150 61.3
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.2e-41 172.9 150 60.7
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.2e-41 172.9 150 60.7
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 6.4e-41 171.4 154 59.7
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 1.1e-40 170.6 145 61.4
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.1e-40 170.6 146 59.6
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.1e-40 170.6 159 56.0
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.4e-40 170.2 110 70.9
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.4e-40 169.5 125 64.8
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 3.2e-40 169.1 190 51.1
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 4.1e-40 168.7 125 64.0
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 7.8e-39 164.5 124 65.3
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 7.8e-39 164.5 124 65.3
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.8e-39 164.5 107 74.8
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 5.1e-38 161.8 141 57.4
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.5e-37 160.2 179 53.1
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 1.9e-37 159.8 133 61.7
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 1.1e-35 154.1 178 51.7
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 1.1e-35 154.1 138 52.9
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 5.8e-34 148.3 152 55.3
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.3e-33 147.1 141 58.2
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 2.2e-33 146.4 164 53.7
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 8.4e-33 144.4 162 52.5
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 5.4e-32 141.7 128 58.6
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.6e-31 140.2 143 50.3
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 2.1e-31 139.8 87 72.4
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.7e-31 139.4 115 62.6
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 2.7e-31 139.4 134 54.5
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.3e-30 137.1 109 56.9
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 5.1e-30 135.2 132 54.5
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 1.5e-29 133.7 115 60.0
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 5.6e-29 131.7 104 64.4
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 7.3e-29 131.3 108 58.3
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 1.2e-28 130.6 98 68.4
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.8e-27 126.7 129 48.1
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 2.2e-17 93.2 135 42.2
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 6.0e-15 85.1 100 49.0
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 5.1e-14 82.0 85 56.5
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 9.6e-13 77.8 100 45.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.8e-09 65.9 38 73.7


User provided reference genes

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